Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16k18
(628 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 2.4
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 4.3
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 4.3
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 4.3
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 4.3
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 4.3
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 4.3
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 4.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 4.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 4.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 4.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 4.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 4.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 4.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 4.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 4.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 4.3
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 7.4
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 9.8
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 9.8
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 9.8
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 9.8
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = -3
Query: 179 YCPQDCGRKLQPRG--VTKYL 123
YCP GRK P G + +YL
Sbjct: 430 YCPVRFGRKADPNGDYIRRYL 450
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 137 MYRLRPPPN 145
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 137 MYRLRPPPN 145
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 137 MYRLRPPPN 145
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 137 MYRLRPPPN 145
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 137 MYRLRPPPN 145
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 137 MYRLRPPPN 145
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 137 MYRLRPPPN 145
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 386 MYRLRPPPN 394
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 386 MYRLRPPPN 394
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 386 MYRLRPPPN 394
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 386 MYRLRPPPN 394
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 386 MYRLRPPPN 394
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 386 MYRLRPPPN 394
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 385 MYRLRPPPN 393
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 370 MYRLRPPPN 378
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 331 LYNLRPPPN 305
+Y LRPPPN
Sbjct: 386 MYRLRPPPN 394
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -3
Query: 281 GQSVRRHSSLNKGSAHFSNLHQVVGDTSSTEKSEYCPQD 165
G+ R N+G F+N ++ D + E ++Y QD
Sbjct: 87 GKGGSRGRGGNRGRTGFNNKNKDGDDNNDYEDNDYGNQD 125
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 511 RSTAVRNSFRMVVICLSALQLTKATDRTLHNIEKII 404
R TA N + V+ A K TD+ I+K+I
Sbjct: 56 RCTAEGNELKRVLPDALATDCKKCTDKQREVIKKVI 91
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 511 RSTAVRNSFRMVVICLSALQLTKATDRTLHNIEKII 404
R TA N + V+ A K TD+ I+K+I
Sbjct: 56 RCTAEGNELKRVLPDALATDCKKCTDKQREVIKKVI 91
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 511 RSTAVRNSFRMVVICLSALQLTKATDRTLHNIEKII 404
R TA N + V+ A K TD+ I+K+I
Sbjct: 56 RCTAEGNELKRVLPDALATDCKKCTDKQREVIKKVI 91
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 386 YRGICQYNLLDIMQRSIGGFGKLECTQ 466
+R + +L + +GGFG++E Q
Sbjct: 359 FRDLRLQDLRPLATLGVGGFGRVELVQ 385
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,634
Number of Sequences: 438
Number of extensions: 3723
Number of successful extensions: 24
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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