Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16j02
(667 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07758-1|AAA65201.1| 501|Homo sapiens IEF SSP 9502 protein. 35 0.30
BC046144-1|AAH46144.1| 243|Homo sapiens PWP1 protein protein. 35 0.30
BC040135-1|AAH40135.1| 244|Homo sapiens PWP1 protein protein. 35 0.30
BC032127-1|AAH32127.1| 253|Homo sapiens PWP1 protein protein. 35 0.30
BC010921-1|AAH10921.1| 147|Homo sapiens PWP1 protein protein. 35 0.30
BC001652-1|AAH01652.1| 501|Homo sapiens PWP1 homolog (S. cerevi... 35 0.30
BC000067-1|AAH00067.1| 249|Homo sapiens PWP1 protein protein. 35 0.30
AK223162-1|BAD96882.1| 501|Homo sapiens nuclear phosphoprotein ... 35 0.30
BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein ... 30 6.5
AK023016-1|BAB14359.1| 692|Homo sapiens protein ( Homo sapiens ... 30 6.5
>L07758-1|AAA65201.1| 501|Homo sapiens IEF SSP 9502 protein.
Length = 501
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/38 (34%), Positives = 27/38 (71%)
Frame = +3
Query: 264 ISCMHFVQRGVAKAVPEKIELTQGELENIIRQTANDLR 377
++C+ +V+ GVAK P+K+EL++ E++ +I + L+
Sbjct: 7 VTCVAWVRCGVAKETPDKVELSKEEVKRLIAEAKEKLQ 44
>BC046144-1|AAH46144.1| 243|Homo sapiens PWP1 protein protein.
Length = 243
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/38 (34%), Positives = 27/38 (71%)
Frame = +3
Query: 264 ISCMHFVQRGVAKAVPEKIELTQGELENIIRQTANDLR 377
++C+ +V+ GVAK P+K+EL++ E++ +I + L+
Sbjct: 7 VTCVAWVRCGVAKETPDKVELSKEEVKRLIAEAKEKLQ 44
>BC040135-1|AAH40135.1| 244|Homo sapiens PWP1 protein protein.
Length = 244
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/38 (34%), Positives = 27/38 (71%)
Frame = +3
Query: 264 ISCMHFVQRGVAKAVPEKIELTQGELENIIRQTANDLR 377
++C+ +V+ GVAK P+K+EL++ E++ +I + L+
Sbjct: 7 VTCVAWVRCGVAKETPDKVELSKEEVKRLIAEAKEKLQ 44
>BC032127-1|AAH32127.1| 253|Homo sapiens PWP1 protein protein.
Length = 253
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/38 (34%), Positives = 27/38 (71%)
Frame = +3
Query: 264 ISCMHFVQRGVAKAVPEKIELTQGELENIIRQTANDLR 377
++C+ +V+ GVAK P+K+EL++ E++ +I + L+
Sbjct: 7 VTCVAWVRCGVAKETPDKVELSKEEVKRLIAEAKEKLQ 44
>BC010921-1|AAH10921.1| 147|Homo sapiens PWP1 protein protein.
Length = 147
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/38 (34%), Positives = 27/38 (71%)
Frame = +3
Query: 264 ISCMHFVQRGVAKAVPEKIELTQGELENIIRQTANDLR 377
++C+ +V+ GVAK P+K+EL++ E++ +I + L+
Sbjct: 7 VTCVAWVRCGVAKETPDKVELSKEEVKRLIAEAKEKLQ 44
>BC001652-1|AAH01652.1| 501|Homo sapiens PWP1 homolog (S.
cerevisiae) protein.
Length = 501
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/38 (34%), Positives = 27/38 (71%)
Frame = +3
Query: 264 ISCMHFVQRGVAKAVPEKIELTQGELENIIRQTANDLR 377
++C+ +V+ GVAK P+K+EL++ E++ +I + L+
Sbjct: 7 VTCVAWVRCGVAKETPDKVELSKEEVKRLIAEAKEKLQ 44
>BC000067-1|AAH00067.1| 249|Homo sapiens PWP1 protein protein.
Length = 249
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/38 (34%), Positives = 27/38 (71%)
Frame = +3
Query: 264 ISCMHFVQRGVAKAVPEKIELTQGELENIIRQTANDLR 377
++C+ +V+ GVAK P+K+EL++ E++ +I + L+
Sbjct: 7 VTCVAWVRCGVAKETPDKVELSKEEVKRLIAEAKEKLQ 44
>AK223162-1|BAD96882.1| 501|Homo sapiens nuclear phosphoprotein
similar to S. cerevisiae PWP1 variant protein.
Length = 501
Score = 34.7 bits (76), Expect = 0.30
Identities = 13/38 (34%), Positives = 27/38 (71%)
Frame = +3
Query: 264 ISCMHFVQRGVAKAVPEKIELTQGELENIIRQTANDLR 377
++C+ +V+ GVAK P+K+EL++ E++ +I + L+
Sbjct: 7 VTCVAWVRCGVAKETPDKVELSKEEVKRLIAEAKEKLQ 44
>BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein 9
protein.
Length = 1031
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 222 IGTMEEENTPNVSLISCMHFVQRGVAKAVPEKIELTQGELENIIRQTANDLR 377
+ T++EENT V+ S G A +VPE I LT E I+ + +L+
Sbjct: 397 VNTVDEENTVMVASASVSQSQLPGTANSVPECISLTSLEDPVILSKIRQNLK 448
>AK023016-1|BAB14359.1| 692|Homo sapiens protein ( Homo sapiens
cDNA FLJ12954 fis, clone NT2RP2005491, weakly similar to
PARAMYOSIN. ).
Length = 692
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 222 IGTMEEENTPNVSLISCMHFVQRGVAKAVPEKIELTQGELENIIRQTANDLR 377
+ T++EENT V+ S G A +VPE I LT E I+ + +L+
Sbjct: 193 VNTVDEENTVMVASASVSQSQLPGTANSVPECISLTSLEDPVILSKIRQNLK 244
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,069,612
Number of Sequences: 237096
Number of extensions: 1438692
Number of successful extensions: 2808
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2808
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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