Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16i08
         (674 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.           187   1e-49
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   4.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.1  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   8.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.1  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score =  187 bits (455), Expect = 1e-49
 Identities = 81/136 (59%), Positives = 101/136 (74%)
 Frame = +3

Query: 258 IVHLFEWKWKDIADECERFLAPKGFGGVQVSPPSENVIIRLSDGTRPWYERYQVMSYKLI 437
           IVHLFEWKW DIA ECE+FL P GFGGVQVSP  EN++I      RPW+ERYQ +SYK I
Sbjct: 33  IVHLFEWKWNDIAKECEQFLGPVGFGGVQVSPVQENIVI----DKRPWWERYQPISYKWI 88

Query: 438 TRSGNQDEFLNMTRRCNDVGIRIYADVVINHMTSDNRESVGTGGSTANYKEYSYPAVPYT 617
           TRSG +++F++M  RCN  G+RIY DV++NHM+ D  ++ GTG S AN   + YP VPYT
Sbjct: 89  TRSGTREQFIDMVARCNKAGVRIYVDVIMNHMSGDRNDAHGTGNSRANTYNFDYPQVPYT 148

Query: 618 RDHFHHPSCSINNYND 665
             +F HP C++NNYND
Sbjct: 149 VKNF-HPRCAVNNYND 163


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 277 GNGRILLMNARDSLRRKASVEFKY 348
           G G I+  N+ DS  R  S  F Y
Sbjct: 213 GEGLIMYQNSDDSFHRLTSNTFDY 236


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 232 RTKISTGRQLCISSNGNGRILLMNARDSLRRKA 330
           RT +S+ R   I   GN R  +   RD+ R+ +
Sbjct: 342 RTGLSSVRDSSIICGGNKRSQVFRGRDANRQNS 374


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 630 HHPSCSIN 653
           HHP+C IN
Sbjct: 401 HHPNCKIN 408


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 287 LPFPFEEMHNCRPVEILVRPFMMI 216
           LP+ FE+ HN   +   V+  +MI
Sbjct: 793 LPYTFEQFHNKELLWTSVKKALMI 816


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 287 LPFPFEEMHNCRPVEILVRPFMMI 216
           LP+ FE+ HN   +   V+  +MI
Sbjct: 831 LPYTFEQFHNKELLWTSVKKALMI 854


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,858
Number of Sequences: 438
Number of extensions: 4581
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)