Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16i07
         (645 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    36   3e-04
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   1.9  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   3.3  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.3  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   4.4  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   7.7  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 36.3 bits (80), Expect = 3e-04
 Identities = 23/94 (24%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
 Frame = +3

Query: 363 ELKSFREIPGPSSLPIMGPFLHFMPGGSLHNINSTELTHK-LYDIYGPIVRIDSMFSKDA 539
           + K+  ++PGP SLPI G    F   G  + +N     +K L   YG + + +++++   
Sbjct: 46  KFKTVSKVPGPFSLPIFGTRWIFSCIG-YYKLNKIHDAYKDLNQRYGALCKEEALWN-FP 103

Query: 540 IVLLYDAESAGIILRNENNMPIRISFKSLSYYRQ 641
           ++ ++  +    I+R  +  P+R   + +S+YR+
Sbjct: 104 MISVFSRQDIETIIRRNSRYPLRPPQEVISHYRR 137


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +3

Query: 303 LQQCVRTVTVSAATE-KLQQTELKSFREIPGPSSLPIMGPFLHFMPGGSLHNINSTELTH 479
           L  C RT T++AAT+ +L   + + F+ I   + L     +  F+    +      E   
Sbjct: 171 LYNCKRTATITAATDCQLWAIDRQCFQTIMMRTGLSRQAEYTDFLKSVPIFKNLPEETLI 230

Query: 480 KLYDI 494
           K+ D+
Sbjct: 231 KISDV 235



 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 418 RFYTSCPEDPFTTLTARN 471
           RFYT+C  + F  L +RN
Sbjct: 469 RFYTACVVEAFDYLHSRN 486


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 366 LKSFREIPGPSSLPIMG 416
           L+   +IPGP +LP++G
Sbjct: 38  LELAEKIPGPPALPLIG 54


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 555 DAESAGIILRNENNMPIRISFKSLSYYRQK 644
           ++ SAG    N+  +P+  ++KSL+   QK
Sbjct: 430 NSTSAGFSQTNKTWLPVNENYKSLNLAAQK 459


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 345 EKLQQTELKSFREIPGPSSLPIMGPFLHFMP 437
           +KLQ   +    +IP P  +P+   + +F+P
Sbjct: 98  KKLQYYNINYIEQIPVPVPIPVPVYYGNFLP 128


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = -3

Query: 421 NGPMIGNDEGPGISRNDFNSVCCSFSVAALTVTVLTHCCRHE 296
           NG ++  ++  G++    N    ++  +   +T LT C R E
Sbjct: 137 NGIIVNINDASGLNLLPMNRNRPAYLASKCALTTLTDCLRSE 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,118
Number of Sequences: 438
Number of extensions: 3202
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)