Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16h15
         (302 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    93   7e-22
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    93   7e-22
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   1.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   3.3  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   4.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    20   5.8  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    20   7.7  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    20   7.7  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    20   7.7  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 93.1 bits (221), Expect = 7e-22
 Identities = 41/50 (82%), Positives = 46/50 (92%)
 Frame = +1

Query: 1   ILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 150
           ILYK+T+HCWATI KTEG +AFFKGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 251 ILYKSTLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVLVLYDEIKNLL 300



 Score = 29.5 bits (63), Expect = 0.010
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 7   YKNTIHCWATIAKTEGTSAFFKGAFSNVLR 96
           YK  I C+  I K +G  ++++G  +NV+R
Sbjct: 53  YKGMIDCFVRIPKEQGFLSYWRGNLANVIR 82


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 93.1 bits (221), Expect = 7e-22
 Identities = 41/50 (82%), Positives = 46/50 (92%)
 Frame = +1

Query: 1   ILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 150
           ILYK+T+HCWATI KTEG +AFFKGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 251 ILYKSTLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVLVLYDEIKNLL 300



 Score = 29.5 bits (63), Expect = 0.010
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 7   YKNTIHCWATIAKTEGTSAFFKGAFSNVLR 96
           YK  I C+  I K +G  ++++G  +NV+R
Sbjct: 53  YKGMIDCFVRIPKEQGFLSYWRGNLANVIR 82


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 140 LISSYKTSTKAPPVPLRTLEKAPL 69
           L++++KT T+ P    + LEK P+
Sbjct: 134 LVNAFKTLTQEPKNTNKFLEKGPV 157


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 211 GSGCDTESHRNYGNNSYVRF 152
           GS  D+++  N+G  S VRF
Sbjct: 587 GSTTDSQTEDNFGPLSNVRF 606


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 190 SHRNYGNNSYVRFTGP 143
           ++  YG N+ +R+ GP
Sbjct: 418 AYNTYGRNAGLRYRGP 433


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -3

Query: 291 WNHCITLYLTKNKLLKSFSCLIIHDLRGVAATRN-HIE 181
           +NH + L+   +   K + C + H+  G   T   HI+
Sbjct: 243 YNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIK 280


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 161 R*IYRTFLISSYKTS 117
           R I R FLIS  KTS
Sbjct: 75  RYIIRMFLISQQKTS 89


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 161 R*IYRTFLISSYKTS 117
           R I R FLIS  KTS
Sbjct: 58  RYIIRMFLISQQKTS 72


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 163 KNCYHNFYVIPCR 201
           +N YH F ++P R
Sbjct: 299 QNSYHEFQILPER 311


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,128
Number of Sequences: 438
Number of extensions: 998
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6368931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)