Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16f18
(688 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007110-1|AAH07110.2| 310|Homo sapiens C11orf54 protein protein. 140 4e-33
AL136605-1|CAB66540.1| 315|Homo sapiens hypothetical protein pr... 140 4e-33
CR533538-1|CAG38569.1| 315|Homo sapiens PTD012 protein. 138 2e-32
BC012298-1|AAH12298.1| 265|Homo sapiens chromosome 11 open read... 100 4e-21
X63692-1|CAA45219.1| 1616|Homo sapiens DNA (cytosine-5-)-methylt... 33 1.3
BC126227-1|AAI26228.1| 1632|Homo sapiens DNMT1 protein protein. 33 1.3
BC092517-1|AAH92517.1| 1511|Homo sapiens DNMT1 protein protein. 33 1.3
AF180682-1|AAF23609.1| 1280|Homo sapiens DNA (cytosine-5)-methyl... 33 1.3
AB209413-1|BAD92650.1| 1606|Homo sapiens DNA (cytosine-5-)-methy... 33 1.3
AK130578-1|BAC85386.1| 241|Homo sapiens protein ( Homo sapiens ... 32 1.7
AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein... 31 5.1
AK096803-1|BAC04865.1| 188|Homo sapiens protein ( Homo sapiens ... 30 8.9
AK057259-1|BAB71399.1| 188|Homo sapiens protein ( Homo sapiens ... 30 8.9
>BC007110-1|AAH07110.2| 310|Homo sapiens C11orf54 protein protein.
Length = 310
Score = 140 bits (339), Expect = 4e-33
Identities = 74/184 (40%), Positives = 106/184 (57%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 VLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVKRDKIY 262
V+ GL NF V+VSV D PDLT+ P+ G+ G ++ E+GG PYL+P V + K+Y
Sbjct: 14 VMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVY 73
Query: 263 DLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCE--GIVNLSVRNGTVDQGTRIVSVHPVGA 436
DL K+ + + AF+ GAGAGP+ LG N E ++ + G+ V+P
Sbjct: 74 DLNKIAKEIKLPGAFILGAGAGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHVNPADG 133
Query: 437 PKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGKVIKVVAKNRTGKSNFITSIRETLKTH 616
Y ++ + + ALL N +EG+PGKVI+V AK RTG NF+T +RETL+ H
Sbjct: 134 GCLLEKYSEK---CHDFQCALLANLFASEGQPGKVIEVKAKRRTGPLNFVTCMRETLEKH 190
Query: 617 YGDK 628
YG+K
Sbjct: 191 YGNK 194
>AL136605-1|CAB66540.1| 315|Homo sapiens hypothetical protein
protein.
Length = 315
Score = 140 bits (339), Expect = 4e-33
Identities = 74/184 (40%), Positives = 106/184 (57%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 VLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVKRDKIY 262
V+ GL NF V+VSV D PDLT+ P+ G+ G ++ E+GG PYL+P V + K+Y
Sbjct: 19 VMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVY 78
Query: 263 DLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCE--GIVNLSVRNGTVDQGTRIVSVHPVGA 436
DL K+ + + AF+ GAGAGP+ LG N E ++ + G+ V+P
Sbjct: 79 DLNKIAKEIKLPGAFILGAGAGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHVNPADG 138
Query: 437 PKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGKVIKVVAKNRTGKSNFITSIRETLKTH 616
Y ++ + + ALL N +EG+PGKVI+V AK RTG NF+T +RETL+ H
Sbjct: 139 GCLLEKYSEK---CHDFQCALLANLFASEGQPGKVIEVKAKRRTGPLNFVTCMRETLEKH 195
Query: 617 YGDK 628
YG+K
Sbjct: 196 YGNK 199
>CR533538-1|CAG38569.1| 315|Homo sapiens PTD012 protein.
Length = 315
Score = 138 bits (333), Expect = 2e-32
Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 VLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVKRDKIY 262
V+ GL NF V+VSV D PDLT+ P+ G+ G ++ E+GG PYL+P V + K+Y
Sbjct: 19 VMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVY 78
Query: 263 DLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCE--GIVNLSVRNGTVDQGTRIVSVHPVGA 436
DL K+ + + AF+ GAGAGP+ LG N E ++ + G+ V+P
Sbjct: 79 DLNKIAKEIKLPGAFILGAGAGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHVNPADG 138
Query: 437 PKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGKVIKVVAKNRTGKSNFITSIRETLKTH 616
Y ++ + + ALL N +EG+PGKVI+V AK RTG N +T +RETL+ H
Sbjct: 139 GCLLEKYSEK---CHDFQCALLANLFASEGQPGKVIEVKAKRRTGPLNLVTCMRETLEKH 195
Query: 617 YGDK 628
YG+K
Sbjct: 196 YGNK 199
>BC012298-1|AAH12298.1| 265|Homo sapiens chromosome 11 open reading
frame 54 protein.
Length = 265
Score = 100 bits (240), Expect = 4e-21
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Frame = +2
Query: 83 VLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVKRDKIY 262
V+ GL NF V+VSV D PDLT+ P+ G+ G ++ E+GG PYL+P V + K+Y
Sbjct: 19 VMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVY 78
Query: 263 DLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCE--GIVNLSVRNGTVDQGTRIVSVHPVGA 436
DL K+ + + AF+ GAGAGP+ LG N E ++ + G+ V+P
Sbjct: 79 DLNKIAKEIKLPGAFILGAGAGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHVNPADG 138
Query: 437 PKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGK 538
Y ++ + + ALL N +EG+PGK
Sbjct: 139 GCLLEKYSEK---CHDFQCALLANLFASEGQPGK 169
>X63692-1|CAA45219.1| 1616|Homo sapiens DNA
(cytosine-5-)-methyltransferase protein.
Length = 1616
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 77 VQVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAK 202
VQV S G F F+E A S +PP + +SPG G K
Sbjct: 1072 VQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGK 1113
>BC126227-1|AAI26228.1| 1632|Homo sapiens DNMT1 protein protein.
Length = 1632
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 77 VQVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAK 202
VQV S G F F+E A S +PP + +SPG G K
Sbjct: 1088 VQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGK 1129
>BC092517-1|AAH92517.1| 1511|Homo sapiens DNMT1 protein protein.
Length = 1511
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 77 VQVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAK 202
VQV S G F F+E A S +PP + +SPG G K
Sbjct: 967 VQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGK 1008
>AF180682-1|AAF23609.1| 1280|Homo sapiens DNA
(cytosine-5)-methyltransferase protein.
Length = 1280
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 77 VQVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAK 202
VQV S G F F+E A S +PP + +SPG G K
Sbjct: 736 VQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGK 777
>AB209413-1|BAD92650.1| 1606|Homo sapiens DNA
(cytosine-5-)-methyltransferase 1 variant protein.
Length = 1606
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 77 VQVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAK 202
VQV S G F F+E A S +PP + +SPG G K
Sbjct: 1059 VQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGK 1100
>AK130578-1|BAC85386.1| 241|Homo sapiens protein ( Homo sapiens
cDNA FLJ27068 fis, clone SPL01475. ).
Length = 241
Score = 32.3 bits (70), Expect = 1.7
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Frame = -2
Query: 426 GCTDTILVPWSTVPLRTLRFTIPSQFTPRYGHGPAPAPARKAGSRFKC----SSSLARSY 259
G + P V L + P Q GHGP P P + G C +SS R
Sbjct: 82 GLVCALTAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLRPC 141
Query: 258 ILSRLTC-GTKYGGPPISTSLASPVNP 181
+ R TC G G + T ASP +P
Sbjct: 142 LSDRGTCPGAPQGA--VGTCRASPQSP 166
>AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein 3
protein.
Length = 1386
Score = 30.7 bits (66), Expect = 5.1
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 182 GLTGDAKLVEIGGPPYLVPQVKRDKIYDLAKLLEHLNRDPAFLAGAGA 325
G+ LV++ PP L P ++ LA L + R+PAFLAG+GA
Sbjct: 854 GVPSAPVLVQLPSPPDLEPGLEVGA--GLAVRLARVLREPAFLAGSGA 899
>AK096803-1|BAC04865.1| 188|Homo sapiens protein ( Homo sapiens
cDNA FLJ39484 fis, clone PROST2014925. ).
Length = 188
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 506 FRATQSWSRRWAAVAGGSRCCPWALLLGAPTLFW 405
FR W R W ++ GG R P LL+ L W
Sbjct: 28 FRGGMLWGRPWDSMRGGHRQHPHPLLVAPAVLRW 61
>AK057259-1|BAB71399.1| 188|Homo sapiens protein ( Homo sapiens
cDNA FLJ32697 fis, clone TESTI2000372. ).
Length = 188
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 506 FRATQSWSRRWAAVAGGSRCCPWALLLGAPTLFW 405
FR W R W ++ GG R P LL+ L W
Sbjct: 28 FRGGMLWGRPWDSMRGGHRQHPHPLLVAPAVLRW 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,819,463
Number of Sequences: 237096
Number of extensions: 2678215
Number of successful extensions: 9632
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9617
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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