Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16f17
         (523 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069556-1|AAL39701.2|  306|Drosophila melanogaster LD28566p pro...    30   1.7  
AE014298-1044|AAN09211.1| 1220|Drosophila melanogaster CG32719-P...    28   8.8  
AE014134-2704|AAF53525.2|  292|Drosophila melanogaster CG4278-PA...    28   8.8  

>AY069556-1|AAL39701.2|  306|Drosophila melanogaster LD28566p
           protein.
          Length = 306

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +2

Query: 404 KHRTACLERLSTYNGKKIILATKQLKDWFVNKWCE 508
           K R   L R++T++G+K+    K+L+++    W E
Sbjct: 10  KGRQGMLRRMNTFSGQKLAAVVKELENFAPTSWAE 44


>AE014298-1044|AAN09211.1| 1220|Drosophila melanogaster CG32719-PA
            protein.
          Length = 1220

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -3

Query: 479  LTVLWL----ILFFFHCRLKVFPNTQFCVCILTKLQIHPNK 369
            L  LWL    IL F+ C     PN  +C+C++  L   PN+
Sbjct: 1024 LEELWLTDRMILLFYPCSYP--PNQIYCICVIALLAKMPNE 1062


>AE014134-2704|AAF53525.2|  292|Drosophila melanogaster CG4278-PA
           protein.
          Length = 292

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +2

Query: 422 LERLSTYNGKKIILATKQLKDWFVNKWCE 508
           L R++T++G+K+    K+L+++    W E
Sbjct: 2   LRRMNTFSGQKLAAVVKELENFAPTSWAE 30


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,186,926
Number of Sequences: 53049
Number of extensions: 366789
Number of successful extensions: 622
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)