Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16f12
(624 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S95936-1|AAB22049.1| 698|Homo sapiens transferrin protein. 34 0.47
M12530-1|AAA61140.1| 698|Homo sapiens TF protein. 34 0.47
DQ923758-1|ABI97197.1| 698|Homo sapiens transferrin protein. 34 0.47
DQ525716-1|ABF47110.1| 698|Homo sapiens transferrin protein. 34 0.47
BC059367-1|AAH59367.1| 698|Homo sapiens transferrin protein. 34 0.47
AY308797-1|AAP45055.1| 698|Homo sapiens transferrin protein. 34 0.47
AF288144-1|AAK77664.1| 698|Homo sapiens transferin protein. 34 0.47
AK222755-1|BAD96475.1| 698|Homo sapiens transferrin variant pro... 32 1.9
M12154-1|AAA59992.1| 738|Homo sapiens melanotransferrin protein. 30 5.8
>S95936-1|AAB22049.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 33.9 bits (74), Expect = 0.47
Identities = 24/93 (25%), Positives = 35/93 (37%)
Frame = +1
Query: 265 DGSQATCSRVETRIDCALRLARGEADIGFFTXXXXXXXSQQQPNDNRVIATVRDVSRLET 444
DG C + + +DC +A EAD N V+A
Sbjct: 52 DGPSVACVKKASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQ 111
Query: 445 FSFEAVAVVPNNHTGGLDGLRGGRYCHPGFDQS 543
+ AVAVV + ++ LRG + CH G +S
Sbjct: 112 TFYYAVAVVKKDSGFQMNQLRGKKSCHTGLGRS 144
>M12530-1|AAA61140.1| 698|Homo sapiens TF protein.
Length = 698
Score = 33.9 bits (74), Expect = 0.47
Identities = 24/93 (25%), Positives = 35/93 (37%)
Frame = +1
Query: 265 DGSQATCSRVETRIDCALRLARGEADIGFFTXXXXXXXSQQQPNDNRVIATVRDVSRLET 444
DG C + + +DC +A EAD N V+A
Sbjct: 52 DGPSVACVKKASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQ 111
Query: 445 FSFEAVAVVPNNHTGGLDGLRGGRYCHPGFDQS 543
+ AVAVV + ++ LRG + CH G +S
Sbjct: 112 TFYYAVAVVKKDSGFQMNQLRGKKSCHTGLGRS 144
>DQ923758-1|ABI97197.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 33.9 bits (74), Expect = 0.47
Identities = 24/93 (25%), Positives = 35/93 (37%)
Frame = +1
Query: 265 DGSQATCSRVETRIDCALRLARGEADIGFFTXXXXXXXSQQQPNDNRVIATVRDVSRLET 444
DG C + + +DC +A EAD N V+A
Sbjct: 52 DGPSVACVKKASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQ 111
Query: 445 FSFEAVAVVPNNHTGGLDGLRGGRYCHPGFDQS 543
+ AVAVV + ++ LRG + CH G +S
Sbjct: 112 TFYYAVAVVKKDSGFQMNQLRGKKSCHTGLGRS 144
>DQ525716-1|ABF47110.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 33.9 bits (74), Expect = 0.47
Identities = 24/93 (25%), Positives = 35/93 (37%)
Frame = +1
Query: 265 DGSQATCSRVETRIDCALRLARGEADIGFFTXXXXXXXSQQQPNDNRVIATVRDVSRLET 444
DG C + + +DC +A EAD N V+A
Sbjct: 52 DGPSVACVKKASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQ 111
Query: 445 FSFEAVAVVPNNHTGGLDGLRGGRYCHPGFDQS 543
+ AVAVV + ++ LRG + CH G +S
Sbjct: 112 TFYYAVAVVKKDSGFQMNQLRGKKSCHTGLGRS 144
>BC059367-1|AAH59367.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 33.9 bits (74), Expect = 0.47
Identities = 24/93 (25%), Positives = 35/93 (37%)
Frame = +1
Query: 265 DGSQATCSRVETRIDCALRLARGEADIGFFTXXXXXXXSQQQPNDNRVIATVRDVSRLET 444
DG C + + +DC +A EAD N V+A
Sbjct: 52 DGPSVACVKKASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQ 111
Query: 445 FSFEAVAVVPNNHTGGLDGLRGGRYCHPGFDQS 543
+ AVAVV + ++ LRG + CH G +S
Sbjct: 112 TFYYAVAVVKKDSGFQMNQLRGKKSCHTGLGRS 144
>AY308797-1|AAP45055.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 33.9 bits (74), Expect = 0.47
Identities = 24/93 (25%), Positives = 35/93 (37%)
Frame = +1
Query: 265 DGSQATCSRVETRIDCALRLARGEADIGFFTXXXXXXXSQQQPNDNRVIATVRDVSRLET 444
DG C + + +DC +A EAD N V+A
Sbjct: 52 DGPSVACVKKASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQ 111
Query: 445 FSFEAVAVVPNNHTGGLDGLRGGRYCHPGFDQS 543
+ AVAVV + ++ LRG + CH G +S
Sbjct: 112 TFYYAVAVVKKDSGFQMNQLRGKKSCHTGLGRS 144
>AF288144-1|AAK77664.1| 698|Homo sapiens transferin protein.
Length = 698
Score = 33.9 bits (74), Expect = 0.47
Identities = 24/93 (25%), Positives = 35/93 (37%)
Frame = +1
Query: 265 DGSQATCSRVETRIDCALRLARGEADIGFFTXXXXXXXSQQQPNDNRVIATVRDVSRLET 444
DG C + + +DC +A EAD N V+A
Sbjct: 52 DGPSVACVKKASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQ 111
Query: 445 FSFEAVAVVPNNHTGGLDGLRGGRYCHPGFDQS 543
+ AVAVV + ++ LRG + CH G +S
Sbjct: 112 TFYYAVAVVKKDSGFQMNQLRGKKSCHTGLGRS 144
>AK222755-1|BAD96475.1| 698|Homo sapiens transferrin variant
protein.
Length = 698
Score = 31.9 bits (69), Expect = 1.9
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +1
Query: 265 DGSQATCSRVETRIDCALRLARGEADIGFFTXXXXXXXSQQQPNDNR--VIATVRDVSRL 438
DG C + + +DC +A EAD + PN+ + V
Sbjct: 52 DGPSVACVKKASYLDCIRAIAANEAD-AVTLDAGLVYDAYLAPNNLKPEVAEFYGSKEDP 110
Query: 439 ETFSFEAVAVVPNNHTGGLDGLRGGRYCHPGFDQS 543
+TF + AVAVV + ++ LRG + CH G +S
Sbjct: 111 QTFYY-AVAVVKKDSGFQMNQLRGKKSCHTGLGRS 144
>M12154-1|AAA59992.1| 738|Homo sapiens melanotransferrin protein.
Length = 738
Score = 30.3 bits (65), Expect = 5.8
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +1
Query: 448 SFEAVAVV--PNNHTGGLDGLRGGRYCHPGFDQSDLRWSPRVLKTLEEVAARTDRC 609
S+ VAVV ++H LD LRG R CH GF S W V ++ R C
Sbjct: 450 SYYVVAVVRRDSSHAFTLDELRGKRSCHAGFG-SPAGWDVPVGALIQRGFIRPKDC 504
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,204,608
Number of Sequences: 237096
Number of extensions: 2094836
Number of successful extensions: 8860
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8851
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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