Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16f03
         (648 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0784 - 19610370-19611548,19611830-19611919,19612001-196120...    28   5.6  
10_01_0332 - 3635909-3635912,3635947-3636003,3636004-3636053,363...    28   7.4  
12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,709...    27   9.7  
08_01_0064 + 444888-444959,445073-445277,445736-445901,446029-44...    27   9.7  
06_02_0324 + 14414422-14414541,14415271-14415347,14415807-144159...    27   9.7  

>04_03_0784 -
           19610370-19611548,19611830-19611919,19612001-19612076,
           19612917-19613134,19613333-19613548,19613974-19614159,
           19614242-19614364,19614456-19614571,19615126-19615588
          Length = 888

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +1

Query: 118 GLRNYYPKIIKLK*STPEMAPRGAFDNQY--DDYSPDSAANVLDESGEQV 261
           GLR  Y    KL+ +   +        QY  D + PD A +++DE+G +V
Sbjct: 411 GLRERYELHHKLRYTDDSLIAAAQLSYQYISDRFLPDKAIDLIDEAGSRV 460


>10_01_0332 -
           3635909-3635912,3635947-3636003,3636004-3636053,
           3637887-3637945,3638054-3638114,3638938-3640479
          Length = 590

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 319 TVSPTLRTGKIFSTCCFINFIQNIN 393
           TVS  L+TG+++   CF+ F+++ N
Sbjct: 545 TVSENLQTGEVYLKECFVYFLKSCN 569


>12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,
            7097150-7097367,7097502-7097717,7097922-7098107,
            7098181-7098303,7098399-7098514,7099254-7099832,
            7101485-7101517,7102485-7103679,7103732-7103797,
            7104843-7104905,7105328-7105411
          Length = 1407

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +1

Query: 118  GLRNYYPKIIKLK*STPEMAPRGAFDNQY--DDYSPDSAANVLDESGEQV 261
            GLR  Y    KL+ +   +        QY  D + PD A +++DE+G +V
Sbjct: 930  GLRERYEIHHKLRYTDDALISAAKLSYQYISDRFLPDKAIDLIDEAGSRV 979


>08_01_0064 +
           444888-444959,445073-445277,445736-445901,446029-446251,
           446982-447058,447370-447557,447845-447942,448202-448335,
           448421-448555,448832-448960,449263-449632,449897-450018,
           450155-450274,450396-450626,450706-450894,450978-451089,
           451193-451438
          Length = 938

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/57 (26%), Positives = 25/57 (43%)
 Frame = +1

Query: 124 RNYYPKIIKLK*STPEMAPRGAFDNQYDDYSPDSAANVLDESGEQVSKYIDLNSFFY 294
           R Y+  +  L  + PE          +  ++   +ANVL   G   S+ +DL  F+Y
Sbjct: 356 REYFNAVGYLNQNVPEEKKLRFIHWDFHKFAKSKSANVLGVLGGVASEALDLTGFYY 412


>06_02_0324 +
           14414422-14414541,14415271-14415347,14415807-14415994,
           14416276-14416373,14416633-14416766,14416852-14416953,
           14417931-14418038,14418335-14418465,14420068-14420142,
           14420439-14420518,14421229-14421320,14422333-14422634,
           14422717-14422856
          Length = 548

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/57 (26%), Positives = 25/57 (43%)
 Frame = +1

Query: 124 RNYYPKIIKLK*STPEMAPRGAFDNQYDDYSPDSAANVLDESGEQVSKYIDLNSFFY 294
           R Y+  +  L  + PE          +  ++   +ANVL   G   S+ +DL  F+Y
Sbjct: 174 REYFNAVGYLNQNVPEEKKLRFIHWDFHKFAKSKSANVLGVLGGGASEALDLTGFYY 230


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,485,655
Number of Sequences: 37544
Number of extensions: 270480
Number of successful extensions: 487
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)