Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16e23
(622 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 51 6e-07
09_06_0267 + 21938300-21938371,21938963-21939235,21940665-219412... 39 0.003
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875... 36 0.020
11_01_0211 - 1660249-1660352,1660504-1660547,1660893-1660934,166... 36 0.026
07_03_0968 - 23027940-23028149,23028800-23029002,23029610-230301... 36 0.034
04_04_1259 + 32171412-32171805,32173341-32174193,32174263-32174581 34 0.079
12_01_0209 - 1583401-1583498,1583879-1583922,1584285-1584373,158... 33 0.14
11_01_0208 - 1628020-1628117,1628282-1628325,1628790-1628878,162... 33 0.14
12_01_0210 - 1593732-1593823,1594730-1594773,1594895-1594983,159... 31 0.56
11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931 31 0.56
07_03_0898 - 22403337-22404950 31 0.74
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 31 0.97
02_05_1340 + 35797923-35799881 31 0.97
11_01_0209 - 1642473-1642579,1642783-1642826,1642935-1643023,164... 30 1.3
01_03_0126 + 12741397-12743022 30 1.3
02_02_0155 + 7272563-7272630,7272934-7273031,7273491-7274057,727... 30 1.7
01_06_0091 - 26363070-26363361,26363467-26363625,26363708-263638... 30 1.7
10_07_0098 - 12844631-12845074,12845329-12846570 29 2.3
05_03_0569 - 15568538-15570049 29 2.3
02_01_0094 - 667361-668962 29 2.3
02_01_0093 + 655420-657021 29 2.3
04_04_1680 + 35318330-35318693,35319789-35319877,35320082-353200... 29 3.0
04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072 29 3.0
11_01_0207 - 1620192-1620280,1620408-1620451,1620703-1620791,162... 28 6.9
07_03_0899 + 22421038-22422642 28 6.9
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 28 6.9
01_01_0525 - 3854508-3854924 27 9.1
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 51.2 bits (117), Expect = 6e-07
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = +3
Query: 255 GYGKFNLCLMLCSLPXXXXXXXXXXXXXYIFSRAQCDMNLSLLDMGTVTAMTYGGMISSA 434
G+GKF L ++ + ++ + + N+S + ++++ + GM+ A
Sbjct: 209 GFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENESLLSSVVFAGMLIGA 268
Query: 435 MVWGFLSDTLGRRQIMVWG-FFCSGLVELTAAMSQNFATLLVMRFASGFLFNG 590
WGF+SD GRR +++ F SG+ L +A S N++ LL +RF G G
Sbjct: 269 SGWGFVSDKYGRRICLLFSTLFASGMGFL-SAFSPNYSCLLALRFLVGIGVGG 320
>09_06_0267 +
21938300-21938371,21938963-21939235,21940665-21941202,
21941288-21941490,21941603-21941827
Length = 436
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +3
Query: 255 GYGKFNLCLMLCSLPXXXXXXXXXXXXXYIFSRAQCDMNLSLLDMGTVTAMTYGGMISSA 434
G+GKF ++ S ++ Q + LS +T++ + GM+ A
Sbjct: 42 GFGKFQAFVLAYSGMAKISEAMEMMLLSFVGQSVQAEWELSAQAESLITSVVFVGMLVGA 101
Query: 435 MVWGFLSDTLGRRQIMV 485
WG +SD GRRQ ++
Sbjct: 102 YSWGIVSDNYGRRQAVM 118
>04_04_1099 -
30886361-30886591,30886739-30886941,30887030-30887555,
30887751-30887988,30888592-30888695,30888784-30889059,
30889216-30889218
Length = 526
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/76 (21%), Positives = 35/76 (46%)
Frame = +3
Query: 252 TGYGKFNLCLMLCSLPXXXXXXXXXXXXXYIFSRAQCDMNLSLLDMGTVTAMTYGGMISS 431
+G+G++ + ++ + ++ Q + L+ +T++ + GM+
Sbjct: 19 SGFGRYQILILSYAGVGLIAEAMEMMLLSFVGPSVQLEWKLTSHQESMITSIVFVGMLIG 78
Query: 432 AMVWGFLSDTLGRRQI 479
A WG +SD GRRQ+
Sbjct: 79 AYTWGVVSDNYGRRQL 94
>11_01_0211 -
1660249-1660352,1660504-1660547,1660893-1660934,
1661010-1661098,1661181-1661225,1661501-1661545,
1661574-1661681,1661765-1661850,1662253-1662340,
1662884-1663084,1663491-1663566,1663652-1663701,
1663783-1663845,1663924-1663977,1664093-1664195,
1664328-1664430,1664516-1664576,1664872-1664912,
1666605-1666761
Length = 519
Score = 35.9 bits (79), Expect = 0.026
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +3
Query: 390 GTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFA 569
G V A G ++ +WG +D +GR+ ++V+G F + +S + + RF
Sbjct: 84 GFVGASFMFGRCLTSTIWGIAADRIGRKPVVVFGIFAVVIFNTLFGLSFTYWMAIATRFL 143
Query: 570 SGFLFNGPFAVLISY 614
G L NG + +Y
Sbjct: 144 LGAL-NGLLGPIKAY 157
>07_03_0968 -
23027940-23028149,23028800-23029002,23029610-23030138,
23030342-23030579,23031121-23031168,23031199-23031494
Length = 507
Score = 35.5 bits (78), Expect = 0.034
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Frame = +3
Query: 255 GYGKFNLCLMLCSLPXXXXXXXXXXXXXYIFSRAQCDMNLSLLDMGTVTAMTYGGMISSA 434
G+G+F ++ + ++ + + +S G V+++ + GM+ A
Sbjct: 27 GFGRFQALVLAYACVGWVAEAMEVMLLSFVGPSVKAEWGVSGAAEGLVSSVVFAGMLIGA 86
Query: 435 MVWGFLSDTLGRRQIMVW------------GFF----CSGLVELTAAMSQNFATLLVMRF 566
+ G +SD GR ++ GF +G+ L +A S N+A+LLV+RF
Sbjct: 87 CLGGLISDRYGRSFLIATLQSKYIYFNFGIGFLSTAVVTGIFGLLSAFSPNYASLLVLRF 146
Query: 567 ASG 575
G
Sbjct: 147 VVG 149
>04_04_1259 + 32171412-32171805,32173341-32174193,32174263-32174581
Length = 521
Score = 34.3 bits (75), Expect = 0.079
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 387 MGTVTAMTYGGMISSAMVWGFLSDT-LGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMR 563
+G V A+ + G + A V+G LSD+ LGR+ + +G+ + AM+ N+ +R
Sbjct: 118 VGLVQAIFFAGCMIGAGVFGHLSDSFLGRKGSLQVVCVLNGVFGMLTAMAPNYWAYAALR 177
Query: 564 FASGF 578
+GF
Sbjct: 178 LLTGF 182
>12_01_0209 -
1583401-1583498,1583879-1583922,1584285-1584373,
1584911-1585018,1585158-1585243,1585385-1585472,
1585970-1586140,1586379-1586454,1586534-1586583,
1586692-1586754,1586839-1586892,1587038-1587140,
1587265-1587367,1587479-1587569,1587629-1587669,
1587801-1587879
Length = 447
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = +3
Query: 429 SAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPFAVLI 608
++++WG ++D +GR+ ++++ F ++ +S + + RF G L NG A +
Sbjct: 81 ASILWGMVADRIGRKPVIIFSIFAVIVLNTLFGLSVKYWMAVTTRFLLGAL-NGLLAPIK 139
Query: 609 SY 614
+Y
Sbjct: 140 AY 141
>11_01_0208 -
1628020-1628117,1628282-1628325,1628790-1628878,
1628986-1629030,1629397-1629504,1629650-1629735,
1629870-1629957,1630275-1630445,1630718-1630793,
1630877-1630926,1631035-1631097,1631201-1631254,
1631398-1631500,1631626-1631728,1632038-1632098,
1632186-1632226,1632375-1632453
Length = 452
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = +3
Query: 429 SAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPFAVLI 608
++++WG ++D +GR+ ++++ F ++ +S + + RF G L NG A +
Sbjct: 71 ASILWGMVADRIGRKPVIIFSIFAVIVLNTLFGLSVKYWMAVTTRFLLGAL-NGLLAPIK 129
Query: 609 SY 614
+Y
Sbjct: 130 AY 131
>12_01_0210 -
1593732-1593823,1594730-1594773,1594895-1594983,
1595076-1595120,1595457-1595564,1595647-1595732,
1595872-1595959,1596159-1596335,1596531-1596606,
1596709-1596758,1596834-1596896,1597152-1597254,
1597337-1597439,1597559-1597619,1598119-1598159,
1599790-1599961
Length = 465
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 417 GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPF 596
G +A+ WG ++D +GR+ ++V+ + +S + L RF G L NG
Sbjct: 98 GRSFAAIFWGVVADRIGRKPVIVFSILSVVIFNTLFGLSTKYWMALTTRFVLGAL-NGLL 156
Query: 597 A 599
A
Sbjct: 157 A 157
>11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931
Length = 478
Score = 31.5 bits (68), Expect = 0.56
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 363 DMNLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVW--GFFCSGLVELTAAMSQ 536
DM LS ++ + M++S + G+ +DTLGRR +V F +G L ++
Sbjct: 61 DMGLSDAEIEVLAGSMNVFMLASILAAGWAADTLGRRGTIVLANAFLMAG--ALAMSLGA 118
Query: 537 NFATLLVMRFAS 572
+A L+ RF +
Sbjct: 119 TYAALMAARFVT 130
>07_03_0898 - 22403337-22404950
Length = 537
Score = 31.1 bits (67), Expect = 0.74
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 411 YGGMISSAMVWGFLSDT-LGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGF 578
+ G ++ + L+DT LGRR+++V + + A S N +RF SGF
Sbjct: 127 FAGNLAGGFLLTTLADTHLGRRKMLVLSLATMSVAGVLTAFSPNVWVYAALRFVSGF 183
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 30.7 bits (66), Expect = 0.97
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 342 IFSRAQCDMNLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWG---FFCSGLV 512
++ + + ++ L G + AM+ G G ++D+ GRR +++ +F SGLV
Sbjct: 30 LYIKKEFNLQSEPLIEGLIVAMSLIGATIITTFSGAVADSFGRRPMLIASAVLYFVSGLV 89
Query: 513 ELTAAMSQNFATLLVMRFASGF 578
L A N LL+ R GF
Sbjct: 90 MLWA---PNVYVLLLARLIDGF 108
>02_05_1340 + 35797923-35799881
Length = 652
Score = 30.7 bits (66), Expect = 0.97
Identities = 22/77 (28%), Positives = 31/77 (40%)
Frame = +3
Query: 390 GTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFA 569
G V A + G G LSD+ GRR +++ L L S N LL+ R
Sbjct: 47 GLVVATSLIGATIVTTFSGPLSDSRGRRPMLIASALLYSLAGLLMLWSPNVPILLLARLV 106
Query: 570 SGFLFNGPFAVLISYIA 620
GF ++ YI+
Sbjct: 107 DGFAIGLAVTLVPVYIS 123
>11_01_0209 -
1642473-1642579,1642783-1642826,1642935-1643023,
1643114-1643158,1643484-1643591,1643691-1643776,
1643917-1644004,1644211-1644387,1644720-1644795,
1644898-1644947,1645030-1645092,1645332-1645434,
1645513-1645615,1645731-1645791,1646268-1646308,
1646792-1646825
Length = 424
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 417 GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPF 596
G +A+ WG ++D +GR+ ++++ + +S + L RF G L NG
Sbjct: 52 GRSFAAIFWGVVADRIGRKPVIMFSILSVVIFNTLFGLSTKYWMALTTRFVLGAL-NGLL 110
Query: 597 A 599
A
Sbjct: 111 A 111
>01_03_0126 + 12741397-12743022
Length = 541
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 411 YGGMISSAMVWGFLSDT-LGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGF 578
+ G ++ + L+DT LGRR++++ + A S N +RF SGF
Sbjct: 133 FAGNLAGGFLLATLADTHLGRRKMLLLSLVTMSVAAALTAFSPNVWVYSALRFVSGF 189
>02_02_0155 +
7272563-7272630,7272934-7273031,7273491-7274057,
7275121-7276085,7276201-7276388,7276497-7276938
Length = 775
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +3
Query: 390 GTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFA 569
G + AM+ G G +SD +GRR +++ L L S N LL+ R
Sbjct: 75 GLIVAMSLIGATIITTFSGPVSDWIGRRPMLILSSILYFLSSLIMLWSPNVYVLLLARLI 134
Query: 570 SGF 578
GF
Sbjct: 135 DGF 137
>01_06_0091 -
26363070-26363361,26363467-26363625,26363708-26363880,
26366639-26366810,26366912-26367294
Length = 392
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 36 PHHRLGAPSPAGSRTCAMAVGQDAGAARPAEEIP 137
P H GA GSR+CA AG+A PA +P
Sbjct: 292 PTHYNGADWGEGSRSCAQQTQPVAGSAYPAGPVP 325
>10_07_0098 - 12844631-12845074,12845329-12846570
Length = 561
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Frame = +3
Query: 348 SRAQCDMNLSLLDMGTVTAMTYGGMIS------SAMVWGFLSDTL 464
+RA C MNL+L + + +T GG+I+ S+ ++G SDT+
Sbjct: 140 TRATCPMNLALAVVAELDDLTVGGLINGYGIEGSSHLYGLFSDTV 184
>05_03_0569 - 15568538-15570049
Length = 503
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 428 VRDGVGLPVGHARPAPDHGVGLLLLRPGRAHGRHEPELRHALSHEVR 568
V++ VG VG+A P + LLL G RH+P R A + R
Sbjct: 99 VQENVGWGVGYAIPTAGLALSLLLFYVGTPFYRHKPVRRGAAAGPAR 145
>02_01_0094 - 667361-668962
Length = 533
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +3
Query: 363 DMNLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNF 542
++NL+ D+G + G I S + G + D LG R + + ++ +
Sbjct: 93 NLNLTKADIGNAGVASVSGSIFSRLAMGAICDMLGPRYGCAFLIMLAAPTVFCMSLIDSA 152
Query: 543 ATLLVMRFASGF 578
A + +RF GF
Sbjct: 153 AGYIAVRFLIGF 164
>02_01_0093 + 655420-657021
Length = 533
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +3
Query: 363 DMNLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNF 542
++NL+ D+G + G I S + G + D LG R + + ++ +
Sbjct: 93 NLNLTKADIGNAGVASVSGSIFSRLAMGAICDMLGPRYGCAFLIMLAAPTVFCMSLIDSA 152
Query: 543 ATLLVMRFASGF 578
A + +RF GF
Sbjct: 153 AGYIAVRFLIGF 164
>04_04_1680 +
35318330-35318693,35319789-35319877,35320082-35320087,
35320638-35321300
Length = 373
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 172 EDKPVTLYRWSWGISSAGRAAPASCPTAIAQVRLPAG 62
E++ + YR SW S + R P C T++ +R G
Sbjct: 96 EEEQIRNYRTSWDSSLSSRYGPFQCTTSVPAMRYTHG 132
>04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072
Length = 414
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 562 LMTKSVAKFWLMAAVSSTRPEQKKPHTMIWRRPSVSDRKPHTIADDII 419
L V K W AA+++ P P M W SD+ PH + D++
Sbjct: 51 LAVADVCKSWCCAAIAAGVPRSCTPWLMSW-----SDKPPHELEYDVL 93
>11_01_0207 -
1620192-1620280,1620408-1620451,1620703-1620791,
1620870-1620914,1621441-1621548,1621638-1621723,
1622202-1622289,1622403-1622576,1623084-1623159,
1623256-1623305,1623392-1623454,1623689-1623791,
1623871-1623973,1624679-1624739,1624864-1624904,
1625076-1625154
Length = 432
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +3
Query: 417 GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPF 596
G +++ WG ++D +GR+ I+ + + +S + + RF G L NG
Sbjct: 67 GRCFASLFWGVVADRIGRKPIIKFSILSVVIFNTLFGLSVKYWMAIATRFLLGAL-NGML 125
Query: 597 A 599
A
Sbjct: 126 A 126
>07_03_0899 + 22421038-22422642
Length = 534
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 411 YGGMISSAMVWGFLSDTL-GRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGF 578
+ G ++ + L+DTL GRR+++V + + S N +RF GF
Sbjct: 135 FAGNLAGGFLLTTLADTLLGRRKMLVLSLVTMSVAGVLTVFSPNVWVYAALRFVCGF 191
>07_03_0797 +
21575948-21576042,21576140-21576902,21577134-21577327,
21577667-21577700,21578421-21578485,21579032-21579524
Length = 547
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 508 RPEQKKPHTMIWRRPSVSDRKPHTIA 431
+PEQ++P WR+P V KP +A
Sbjct: 453 KPEQQRPEPETWRKP-VEPPKPEVVA 477
>01_01_0525 - 3854508-3854924
Length = 138
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 57 PSPAGSRTCAMAVGQDAGAAR 119
PSPA +R C A AGAAR
Sbjct: 13 PSPAAARPCVAASASAAGAAR 33
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,822,358
Number of Sequences: 37544
Number of extensions: 287009
Number of successful extensions: 1328
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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