BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16e21
(348 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029819-1|AAH29819.1| 483|Homo sapiens dual oxidase maturation... 28 7.0
CR533511-1|CAG38542.1| 344|Homo sapiens ZDHHC4 protein. 28 9.3
BC001239-1|AAH01239.1| 344|Homo sapiens ZDHHC4 protein protein. 28 9.3
AY359090-1|AAQ89448.1| 344|Homo sapiens ZDHHC4 protein. 28 9.3
AK223532-1|BAD97252.1| 344|Homo sapiens zinc finger, DHHC domai... 28 9.3
AK001341-1|BAA91636.1| 344|Homo sapiens protein ( Homo sapiens ... 28 9.3
AF201931-1|AAF86867.1| 344|Homo sapiens DC1 protein. 28 9.3
>BC029819-1|AAH29819.1| 483|Homo sapiens dual oxidase maturation
factor 1 protein.
Length = 483
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +3
Query: 33 RGRRCCNIWHWGSVD-SISGSRARF-QLSGNSGRKHSRC 143
RGR +W WGS + G RA +L NSG K C
Sbjct: 411 RGRGTGRLWRWGSKERRACGVRAMLPRLVSNSGLKRPSC 449
>CR533511-1|CAG38542.1| 344|Homo sapiens ZDHHC4 protein.
Length = 344
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 129 KHSRCCTSILRKFSGRQHCVTVDCCCHGSPH 221
K+ RC T LRK + +HC + C H H
Sbjct: 147 KNVRCSTCDLRKPARSKHCSVCNWCVHRFDH 177
>BC001239-1|AAH01239.1| 344|Homo sapiens ZDHHC4 protein protein.
Length = 344
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 129 KHSRCCTSILRKFSGRQHCVTVDCCCHGSPH 221
K+ RC T LRK + +HC + C H H
Sbjct: 147 KNVRCSTCDLRKPARSKHCSVCNWCVHRFDH 177
>AY359090-1|AAQ89448.1| 344|Homo sapiens ZDHHC4 protein.
Length = 344
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 129 KHSRCCTSILRKFSGRQHCVTVDCCCHGSPH 221
K+ RC T LRK + +HC + C H H
Sbjct: 147 KNVRCSTCDLRKPARSKHCSVCNWCVHRFDH 177
>AK223532-1|BAD97252.1| 344|Homo sapiens zinc finger, DHHC domain
containing 4 variant protein.
Length = 344
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 129 KHSRCCTSILRKFSGRQHCVTVDCCCHGSPH 221
K+ RC T LRK + +HC + C H H
Sbjct: 147 KNVRCSTCDLRKPARSKHCSVCNWCVHRFDH 177
>AK001341-1|BAA91636.1| 344|Homo sapiens protein ( Homo sapiens
cDNA FLJ10479 fis, clone NT2RP2000120. ).
Length = 344
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 129 KHSRCCTSILRKFSGRQHCVTVDCCCHGSPH 221
K+ RC T LRK + +HC + C H H
Sbjct: 147 KNVRCSTCDLRKPARSKHCSVCNWCVHRFDH 177
>AF201931-1|AAF86867.1| 344|Homo sapiens DC1 protein.
Length = 344
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 129 KHSRCCTSILRKFSGRQHCVTVDCCCHGSPH 221
K+ RC T LRK + +HC + C H H
Sbjct: 147 KNVRCSTCDLRKPARSKHCSVCNWCVHRFDH 177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,877,010
Number of Sequences: 237096
Number of extensions: 1040847
Number of successful extensions: 1691
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1691
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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