Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16e14
         (266 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99288-1|CAB16545.2|  339|Caenorhabditis elegans Hypothetical pr...    27   1.4  
L41807-1|AAA67369.1|  402|Caenorhabditis elegans fatty acid desa...    26   4.2  
AL132951-8|CAC44309.1|  402|Caenorhabditis elegans Hypothetical ...    26   4.2  
Z66565-3|CAA91479.1|  177|Caenorhabditis elegans Hypothetical pr...    25   5.6  
AF039053-3|AAC25880.2|  349|Caenorhabditis elegans Hypothetical ...    25   7.4  
Z71258-2|CAA95781.2|  668|Caenorhabditis elegans Hypothetical pr...    25   9.7  

>Z99288-1|CAB16545.2|  339|Caenorhabditis elegans Hypothetical
           protein ZK262.1 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 120 SCSGFCSDSFYGFRFNNHNFFCNYFWL 40
           SC  F + S  G   N  N FCN+FW+
Sbjct: 107 SCQ-FLTISIAGIFENRFNTFCNFFWV 132


>L41807-1|AAA67369.1|  402|Caenorhabditis elegans fatty acid
           desaturase protein.
          Length = 402

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 102 SDSFYGFRFN-NHNFFCNYFWLN 37
           SD+ YG++   N++FF  + W N
Sbjct: 353 SDTQYGYKSQVNYDFFARFLWFN 375


>AL132951-8|CAC44309.1|  402|Caenorhabditis elegans Hypothetical
           protein Y67H2A.8 protein.
          Length = 402

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 102 SDSFYGFRFN-NHNFFCNYFWLN 37
           SD+ YG++   N++FF  + W N
Sbjct: 353 SDTQYGYKSQVNYDFFARFLWFN 375


>Z66565-3|CAA91479.1|  177|Caenorhabditis elegans Hypothetical
           protein T04F8.3 protein.
          Length = 177

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 105 CSDSFYGFRFNNHNFFCNYFWLNSF 31
           CS   Y F F   +F  +YF+ NSF
Sbjct: 134 CSILEYNFFFLQFSFLSSYFYSNSF 158


>AF039053-3|AAC25880.2|  349|Caenorhabditis elegans Hypothetical
           protein C45H4.13 protein.
          Length = 349

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 90  YGFRFNNHNFFCNYFWLNSF 31
           YG+ +NN+ +  NY+  NS+
Sbjct: 311 YGYGYNNNYYSGNYYCCNSY 330


>Z71258-2|CAA95781.2|  668|Caenorhabditis elegans Hypothetical
           protein C01H6.2 protein.
          Length = 668

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 123 QSCSGFCSDSFYGFRFNNHNFFCNYF 46
           QS + FC   FYG R NN     +Y+
Sbjct: 469 QSFAVFCFSDFYGERENNKATIPDYY 494


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,798,420
Number of Sequences: 27780
Number of extensions: 53979
Number of successful extensions: 115
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 12,740,198
effective HSP length: 67
effective length of database: 10,878,938
effective search space used: 228457698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)