Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16e11
(662 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 210 2e-55
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 97 3e-21
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 55 1e-08
SPCC417.11c |||glutamate-1-semialdehyde 2,1-aminomutaseaminotran... 50 4e-07
SPBC1773.03c |||aminotransferase class-III, unknown specificty|S... 38 0.001
SPBC1604.03c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 1.8
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 27 1.8
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 26 4.2
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 26 4.2
SPAC1786.01c ||SPAC31G5.20c|triacylglycerol lipase|Schizosacchar... 25 9.7
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 25 9.7
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 210 bits (512), Expect = 2e-55
Identities = 91/170 (53%), Positives = 121/170 (71%)
Frame = +1
Query: 112 MAEQNLSSKEIFQLEDKYGCRNYAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGH 291
+ S+++I LE++Y NY PLPV + +G VWD EG++Y DFLSAYSAVNQGH
Sbjct: 6 LLHNTFSTEQIEVLENEYAAHNYHPLPVCFSKAKGAKVWDPEGREYLDFLSAYSAVNQGH 65
Query: 292 CHPRIIEALKKQADNLTLVSRAFYSDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKI 471
CHP+IIEAL +QA +TL SRAFY+D+ G + KY+TE FGY+ ++PMNTG E E+ACK+
Sbjct: 66 CHPKIIEALVEQAQRVTLSSRAFYNDKFGPFAKYITEYFGYEMVIPMNTGAEAVETACKL 125
Query: 472 ARKWGYEVKKIPEGQAKIIFAEGNFWGRTLSAVSSSSDPTCYQGFGPYMP 621
AR WGY+ KKIP +A I+ NF GRT+ +S S+DP +GPY+P
Sbjct: 126 ARLWGYKAKKIPTDEAIILSCVDNFHGRTMGIISMSTDPDARDNYGPYLP 175
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 96.7 bits (230), Expect = 3e-21
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 7/164 (4%)
Frame = +1
Query: 178 YAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRA 357
YA PV +GEG +++D EG+KY DF S + + GH HP + Q L S
Sbjct: 51 YARYPVVAAKGEGSYLFDKEGRKYIDFTSGVAVTSLGHAHPEVARLAADQCSKLVHSSNL 110
Query: 358 FYSDQLGKYEKYMTE-------LFGYDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQ 516
FY++ + + + G ++ N G E E+A K ARK +E K EG+
Sbjct: 111 FYNEPAIELSNVINNSLAKNSGIAGPTKIFFANCGTEANETALKFARKAAFE--KYGEGK 168
Query: 517 AKIIFAEGNFWGRTLSAVSSSSDPTCYQGFGPYMPGFILIPYNN 648
++I++ +F GR+L ++S +++P +GF P +P + YN+
Sbjct: 169 SQIVYFNNSFHGRSLGSLSITANPKYKRGFQPLLPDVVQAVYND 212
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 54.8 bits (126), Expect = 1e-08
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 2/155 (1%)
Frame = +1
Query: 190 PVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSD 369
P + R +G V+D + DF S + GH HP I ++K L + F S
Sbjct: 33 PKIIVRAKGCCVYDEQDNAILDFTSGQMSAILGHSHPDITACIEKNLPKLVHLFSGFLSP 92
Query: 370 QLGKYEKYMTELF--GYDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIFAEGN 543
+ + +++L G D+ L ++TG E E+A ++A+ + + + + A +
Sbjct: 93 PVVQLATELSDLLPDGLDKTLFLSTGGEANEAALRMAKVYTNKYECV---------AFSS 143
Query: 544 FWGRTLSAVSSSSDPTCYQGFGPYMPGFILIPYNN 648
W +S + +G+GP +PG IP N
Sbjct: 144 SWHGVTGGAASLTFAAARRGYGPALPGSYTIPEPN 178
>SPCC417.11c |||glutamate-1-semialdehyde
2,1-aminomutaseaminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 435
Score = 49.6 bits (113), Expect = 4e-07
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 3/159 (1%)
Frame = +1
Query: 181 APLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAF 360
AP P+ + G G + DV+G +Y DFL+ +A GH +P I +AL + D + +
Sbjct: 49 APFPIFIEAGYGSKLRDVDGHEYTDFLNELTAGIYGHSNPVIKKALMQGFDEIGISLGGT 108
Query: 361 YSDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIFAEG 540
+ +L E + +++ N+G E +A ARK+ G+ +I G
Sbjct: 109 TTCELNYAEALKSRFLSIEKIRFCNSGTEANITAIIAARKF--------TGKRAVIAMHG 160
Query: 541 NFWGRTLSAVSSSSDPTCYQGFGPY---MPGFILIPYNN 648
+ G LS G PY FIL YNN
Sbjct: 161 GYHGGPLSFA---------HGISPYNMDSQDFILCEYNN 190
>SPBC1773.03c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 37.9 bits (84), Expect = 0.001
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 3/131 (2%)
Frame = +1
Query: 190 PVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLV-SRAFYS 366
P + R EGV+++ +G + D + GH + +I+A+ KQ++ + + S F +
Sbjct: 28 PPTVVRAEGVYLYLEDGTRIMDATGGAAVACLGHGNKEVIDAMHKQSEKVCYIHSMGFSN 87
Query: 367 DQLGKYEKYMTELFG--YDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIFAEG 540
+ K + + R N+G E E+ K+ ++ V + + + II +
Sbjct: 88 EPADKLANLLVSEHPDVFARAYFANSGSEAVETCLKLILQYWQLVGE--KQRCHIIARKQ 145
Query: 541 NFWGRTLSAVS 573
+ G TL A+S
Sbjct: 146 GYHGNTLFALS 156
>SPBC1604.03c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 330
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 85 TIP*QFCKIMAEQNLSSKEIFQLEDKYGCRNYAPLPVALCRGEGVFVWDVEGKKYYDFLS 264
T+P FC I+ ++ +S KE+ + ++ +N P P ++ ++ KK DFL
Sbjct: 180 TLPSVFCTIVDDEGISLKELLYIIEESLLKNAIPDPFSVSTYTLKSAFEHLVKK--DFLK 237
Query: 265 AYSA 276
Y+A
Sbjct: 238 YYTA 241
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 235 EGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSR 354
E Y + + AY +VN G I+E LK++ L +V+R
Sbjct: 1180 EPSTYENMVRAYLSVNDGRKAMEIVEQLKRKRYPLPVVNR 1219
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 26.2 bits (55), Expect = 4.2
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 244 KYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSDQLGKYEKYMTELFGYDRL 423
++ D L Y N HP IEAL+K + Y + K +KY+T L GY L
Sbjct: 111 RFKDHLPFYE--NYIRNHPLAIEALQKSTAPRQTGLKLNY---VSKLDKYVTPLDGYSHL 165
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -1
Query: 494 TSYPHLRAILHALSPPSTPVFIGSRRSYPNN 402
T+ P+L ++H+ S ++PVFI + RS +N
Sbjct: 7 TNTPNLPNLIHSESITNSPVFIPNLRSKSDN 37
>SPAC1786.01c ||SPAC31G5.20c|triacylglycerol
lipase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 120 FSHNFTKLLRYGTVLLCLRCCFNLTVRHRGVSTSKINQRL 1
FSHN YG LCL + + H GV + +NQ L
Sbjct: 242 FSHN------YGRTALCLSGGASFAIYHTGVLRALLNQDL 275
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 25.0 bits (52), Expect = 9.7
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 467 LHALSPPSTPVFIGSRRSYPNNSVIYFSYLPS*SE*NALDTSVKLSA 327
L A S PVF+ S+R Y +NS I + S N D + + SA
Sbjct: 40 LRAHSTFKEPVFLLSQRQYSHNSKILTELINSVKRPNKPDQNEEKSA 86
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,950,970
Number of Sequences: 5004
Number of extensions: 64369
Number of successful extensions: 194
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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