Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16e11
(662 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 206 9e-54
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 78 5e-15
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 73 2e-13
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 50 1e-06
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 50 2e-06
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 48 5e-06
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 46 4e-05
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 45 5e-05
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 32 0.47
09_02_0548 - 10467342-10468810,10470309-10471632 29 2.5
07_03_1263 + 25279899-25279985,25280263-25282372,25282700-252827... 29 3.3
03_04_0206 - 18493178-18495310 29 3.3
06_01_0522 + 3787054-3788004,3788094-3788422,3788640-3788796 28 5.8
05_07_0028 + 27153663-27153932,27154966-27155175,27156220-271564... 28 5.8
06_03_0998 - 26742608-26742802,26743137-26743325,26743600-267436... 28 7.6
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 206 bits (504), Expect = 9e-54
Identities = 91/178 (51%), Positives = 125/178 (70%)
Frame = +1
Query: 127 LSSKEIFQLEDKYGCRNYAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRI 306
L+S+E+ ++E + NY P+PV +GEG + D EG KY DFLSAYSAVNQGHCHP++
Sbjct: 37 LTSEELMRMERERSAHNYHPIPVVFSKGEGSHILDPEGNKYIDFLSAYSAVNQGHCHPKV 96
Query: 307 IEALKKQADNLTLVSRAFYSDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKIARKWG 486
+ ALK+QA+ LTL SRAFY+D+ + +Y+T +FGY+ +LPMNTG EG E+A K+ RKWG
Sbjct: 97 LRALKEQAERLTLSSRAFYNDKFPIFAEYLTSMFGYEMMLPMNTGAEGVETAIKLVRKWG 156
Query: 487 YEVKKIPEGQAKIIFAEGNFWGRTLSAVSSSSDPTCYQGFGPYMPGFILIPYNNIPAL 660
YE KKIP+ +A I+ G F GRTL +S S D +GFGP +PG + + + + L
Sbjct: 157 YEKKKIPKNEALIVSCCGCFHGRTLGVISMSCDNDATRGFGPLVPGHLKVDFGDTDGL 214
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 78.2 bits (184), Expect = 5e-15
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Frame = +1
Query: 118 EQNLSSKEIFQLEDKYGCRNYAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCH 297
E + +S+ + + E +Y Y V L G G ++D +G++Y D + + GH
Sbjct: 58 ELSAASRAVVEDEARYIVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHAD 117
Query: 298 PRIIEALKKQADNLTLVSRAFYSDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKIAR 477
P + A+ QA L S Y+ K + E DR+ NTG E E+A K AR
Sbjct: 118 PDWVAAVSAQAATLVHASNVQYTVPQVALAKRLVEASFADRVFFANTGTEANEAAIKFAR 177
Query: 478 KWGYEVKKIPEGQAKIIFAE--GNFWGRTLSAVSSSSDPTCYQGFGPYMPGFILIPYNNI 651
K+ + P+G A F F GRT+ +++ +S + F P MPG Y N+
Sbjct: 178 KFQRVAR--PDGDAPTEFMSFTNCFHGRTMGSLALTSKVQYREPFAPVMPGATFAEYGNL 235
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 73.3 bits (172), Expect = 2e-13
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 9/187 (4%)
Frame = +1
Query: 118 EQNLSSKEIFQLEDKYGCRNYAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCH 297
E + +S+ + + E +Y Y V L G G ++D +G++Y D + + GH
Sbjct: 62 ELSAASRAVVEDEARYIVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHAD 121
Query: 298 PRIIEALKKQADNLTLVSRAFYSDQLGKYEKY-------MTELFGYDRLLPMNTGVEGGE 456
P + A+ QA L S Y+ E+ + E DR+ NTG E E
Sbjct: 122 PDWVAAVSAQAATLVHASNVQYTVPQASLERVTPTAHHRLVEASFADRVFFANTGTEANE 181
Query: 457 SACKIARKWGYEVKKIPEGQAKIIFAE--GNFWGRTLSAVSSSSDPTCYQGFGPYMPGFI 630
+A K ARK Y+ P+G A F F GRT+ +++ +S + F P MPG
Sbjct: 182 AAIKFARK--YQRVARPDGDAPTEFMSFTNCFHGRTMGSLALTSKVQYREPFAPVMPGAT 239
Query: 631 LIPYNNI 651
Y N+
Sbjct: 240 FAEYGNL 246
>04_04_1143 +
31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 50.4 bits (115), Expect = 1e-06
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 6/154 (3%)
Frame = +1
Query: 190 PVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFY-- 363
P+ + R EG +V+D++GKKY D L+ G PR+++A +Q L +F+
Sbjct: 511 PLVIERSEGSYVYDIDGKKYLDSLAGLWCTALGGSEPRLVKAATEQLHKLPFY-HSFWNR 569
Query: 364 ----SDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIF 531
S L K M ++ N+G E +S K+ W Y + K I
Sbjct: 570 TTKPSLDLAKELLSMFTAREMGKVFFTNSGSEANDSQVKLV--WYYNNALGRPDKKKFIA 627
Query: 532 AEGNFWGRTLSAVSSSSDPTCYQGFGPYMPGFIL 633
++ G TL + S S P +Q F P F+L
Sbjct: 628 RSKSYHGSTLISASLSGLPALHQKFDLPAP-FVL 660
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 214 GVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNL 339
G +V+D +G KY D L+ G PR+++A Q + L
Sbjct: 57 GSYVYDSKGNKYLDTLAGLWCTALGGSEPRLVKAATDQLNKL 98
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 49.6 bits (113), Expect = 2e-06
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Frame = +1
Query: 190 PVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSD 369
P+ + R EG +V+D+ GKKY D L+ + G PR+I+A Q + L +F++
Sbjct: 122 PLVIDRSEGSYVYDINGKKYIDALAGLWSTALGGNEPRLIKAATDQLNKLPFY-HSFWNR 180
Query: 370 QLGKYEKYMTELFG------YDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIF 531
E+ ++ N+G E +S K+ W Y + K I
Sbjct: 181 TTKPSLDLANEILSMFTAREMGKIFFTNSGSEANDSQVKLV--WYYNNALGRPNKKKFIA 238
Query: 532 AEGNFWGRTLSAVSSSSDPTCYQGFGPYMPGFIL 633
++ G TL + S S P +Q F P F+L
Sbjct: 239 RSKSYHGSTLVSASLSGLPALHQKFDLPAP-FVL 271
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Frame = +1
Query: 178 YAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRA 357
Y P+ + G+ +++D GK+Y D V+ GHCHP I+ A+ +Q L +
Sbjct: 84 YYQKPLNIVEGKMQYLYDENGKRYLDCFGGIVTVSCGHCHPDIVNAVVEQTKLLQHTTTI 143
Query: 358 FYSDQLGKY-EKYMTELFGYDRLLP-MNTGVEGGESACKIARKWGYEVKKI 504
+ + + ++ E +++ G +++ +N+G E E A +AR + + I
Sbjct: 144 YLNQPIVEFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLYSGNLNMI 194
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +1
Query: 190 PVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSD 369
P+ + G+ +++D G++Y D + + V GHCHP ++ A+ QA L + + +
Sbjct: 64 PLNIVEGKMQYLFDERGRRYLDAFAGIATVCCGHCHPDVVGAIAAQAGRLQHSTVLYLNH 123
Query: 370 QLGKYEKYMTELFGYDRLLPM--NTGVEGGESACKIAR 477
+ + + + D + N+G E E A +AR
Sbjct: 124 AIADFAEALASKMPGDLKVVFFTNSGTEANELAIMMAR 161
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +1
Query: 220 FVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSDQLGKYEKYMT 399
+++D +G++Y D + V GHCHP ++EA+ QA + + + + + + + +
Sbjct: 99 YLFDEDGRRYLDAFGGIATVCCGHCHPDVVEAMVNQAKRIQHSTVLYLNHAIADFAEALA 158
Query: 400 ELFGYDRLLPM--NTGVEGGESACKIAR 477
D + N+G E E A IAR
Sbjct: 159 AKMPGDLKVVFFTNSGTEANELALMIAR 186
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +1
Query: 190 PVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHC----HPRIIEALKK 324
P+ +G +WDV+G +Y D++ ++ GH + +IE LKK
Sbjct: 86 PIVFDSVKGSRMWDVDGNEYIDYVGSWGPAIIGHADDTVNAALIETLKK 134
>09_02_0548 - 10467342-10468810,10470309-10471632
Length = 930
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3
Query: 507 RYLLDFVPPFTCYLACTFTS 448
RYLL+++ P + LACTFTS
Sbjct: 700 RYLLNYILPLSETLACTFTS 719
>07_03_1263 +
25279899-25279985,25280263-25282372,25282700-25282793,
25283178-25283314,25283419-25283454,25283602-25283642,
25284036-25284125,25284229-25284284,25284947-25285030,
25285072-25285150
Length = 937
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +2
Query: 50 RLKQQRRHNSTVPYRNNFVKLWLNKICH---LKKFSSWKTNMVVEITLPCLLLYAEVKEC 220
RL + T+P + L +N +CH L + + NM++E P ++Y + C
Sbjct: 584 RLYHKMLDEGTMPNIFTYTSL-INGLCHDDRLPEMTPLLKNMILEGLTPDRIMYTSLIAC 642
Query: 221 SCGMSKEKSIM 253
C S K M
Sbjct: 643 YCKRSNMKKAM 653
>03_04_0206 - 18493178-18495310
Length = 710
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -1
Query: 590 VGSDDDDTADRVRPQKFPSAKIILAWPSGIFLTSYPHLRAILHALSPPSTPVF 432
V +DDDD PQK+ K+ +P LT P L+ I S P+ P F
Sbjct: 447 VANDDDDMKPADLPQKWLDYKVEFHFPEPTLLTP-PLLQLIEVGFSYPNRPDF 498
>06_01_0522 + 3787054-3788004,3788094-3788422,3788640-3788796
Length = 478
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 548 QKFPSAKIILAWPSGIF-LTSYPHLRAILHALSPPSTPVFIGSRRSY 411
+K + K++LA S + LT+Y + A + ++PP P + S R+Y
Sbjct: 137 EKDMATKLLLARGSSLIDLTTYNSIAAAKNIIAPPPPPRTLKSERAY 183
>05_07_0028 +
27153663-27153932,27154966-27155175,27156220-27156414,
27156491-27156840,27157198-27157423,27157524-27157692,
27158145-27158990,27159647-27159818,27159934-27160052,
27160117-27160155,27161033-27161157,27161250-27161309,
27161471-27161542,27161980-27162114
Length = 995
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 82 RTIP*QFCKIMAEQNLSSKEIFQLEDKYGC 171
+TI FC ++ N+ K+ DKYGC
Sbjct: 237 KTISHDFCSPCSKSNVRCKDAIDQTDKYGC 266
>06_03_0998 -
26742608-26742802,26743137-26743325,26743600-26743657,
26743990-26744056,26744368-26746504
Length = 881
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 113 WLNKICHLKKFSSWKTNMVVEITLPCLLLYAEVKECS 223
WL+ C + F KT + + C L AE EC+
Sbjct: 556 WLDFFCCCRNFKMVKTVVSYHLRFSCFLTLAEKHECT 592
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,279,824
Number of Sequences: 37544
Number of extensions: 419284
Number of successful extensions: 1164
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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