Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16e11
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 262 1e-70
U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical p... 261 4e-70
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 111 6e-25
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 61 8e-10
U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 32 0.42
AC006723-5|AAK68424.1| 575|Caenorhabditis elegans Hypothetical ... 31 0.96
AF025456-1|AAB70959.3| 438|Caenorhabditis elegans Hypothetical ... 28 6.8
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 27 9.0
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 262 bits (643), Expect = 1e-70
Identities = 107/180 (59%), Positives = 151/180 (83%)
Frame = +1
Query: 121 QNLSSKEIFQLEDKYGCRNYAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHP 300
++L+S++IF E K+GC NY PLPVAL +GEG FVWDVEGKKY+DFL+AYSAVNQGHCHP
Sbjct: 17 RSLTSQQIFDREKKFGCHNYKPLPVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHP 76
Query: 301 RIIEALKKQADNLTLVSRAFYSDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKIARK 480
++++ +++QA LTL SRAFY++ LG+YE+Y+T+LF YD++LPMNTGVE ESA K+AR+
Sbjct: 77 KLLKVVQEQASTLTLTSRAFYNNVLGEYEEYVTKLFKYDKVLPMNTGVEACESAVKLARR 136
Query: 481 WGYEVKKIPEGQAKIIFAEGNFWGRTLSAVSSSSDPTCYQGFGPYMPGFILIPYNNIPAL 660
W Y+VK + + +A ++FAE NFWGR+++A+S+S+DP + FGP++PGF +PYNN+ A+
Sbjct: 137 WAYDVKGVKDNEAVVVFAENNFWGRSIAAISASTDPDSFARFGPFVPGFKTVPYNNLKAV 196
>U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical
protein C16A3.10c protein.
Length = 226
Score = 261 bits (639), Expect = 4e-70
Identities = 106/177 (59%), Positives = 149/177 (84%)
Frame = +1
Query: 121 QNLSSKEIFQLEDKYGCRNYAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHP 300
++L+S++IF E K+GC NY PLPVAL +GEG FVWDVEGKKY+DFL+AYSAVNQGHCHP
Sbjct: 17 RSLTSQQIFDREKKFGCHNYKPLPVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHP 76
Query: 301 RIIEALKKQADNLTLVSRAFYSDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKIARK 480
++++ +++QA LTL SRAFY++ LG+YE+Y+T+LF YD++LPMNTGVE ESA K+AR+
Sbjct: 77 KLLKVVQEQASTLTLTSRAFYNNVLGEYEEYVTKLFKYDKVLPMNTGVEACESAVKLARR 136
Query: 481 WGYEVKKIPEGQAKIIFAEGNFWGRTLSAVSSSSDPTCYQGFGPYMPGFILIPYNNI 651
W Y+VK + + +A ++FAE NFWGR+++A+S+S+DP + FGP++PGF +PYNN+
Sbjct: 137 WAYDVKGVKDNEAVVVFAENNFWGRSIAAISASTDPDSFARFGPFVPGFKTVPYNNL 193
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 111 bits (266), Expect = 6e-25
Identities = 44/64 (68%), Positives = 57/64 (89%)
Frame = +1
Query: 121 QNLSSKEIFQLEDKYGCRNYAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHP 300
++L+S++IF E K+GC NY PLPVAL +GEG FVWDVEGKKY+DFL+AYSAVNQGHCHP
Sbjct: 17 RSLTSQQIFDREKKFGCHNYKPLPVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHP 76
Query: 301 RIIE 312
++++
Sbjct: 77 KLLK 80
Score = 72.5 bits (170), Expect = 2e-13
Identities = 26/55 (47%), Positives = 43/55 (78%)
Frame = +1
Query: 496 KKIPEGQAKIIFAEGNFWGRTLSAVSSSSDPTCYQGFGPYMPGFILIPYNNIPAL 660
K + + +A ++FAE NFWGR+++A+S+S+DP + FGP++PGF +PYNN+ A+
Sbjct: 77 KLLKDNEAVVVFAENNFWGRSIAAISASTDPDSFARFGPFVPGFKTVPYNNLKAV 131
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Frame = +1
Query: 199 LCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSDQLG 378
+ +GE F++D GKKY DF V+ GHCHP+I AL +QA L + ++++ +
Sbjct: 25 ITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKINAALTEQAQKLWHTTSIYHTEPIY 84
Query: 379 KYEKYMTELF--GYDRLLPMNTGVEGGESACKIARKW 483
+Y + + F + + +N+G E + A +AR +
Sbjct: 85 EYAEKLLSKFPSKLNSVFFVNSGSEANDLALALARNY 121
>U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical
protein T01B11.2b protein.
Length = 160
Score = 55.6 bits (128), Expect = 3e-08
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +1
Query: 178 YAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRA 357
Y+ P + R +++D + K+ D +S V GHCHP+++EA+ KQ T R
Sbjct: 46 YSDDPFMVSRASMQYLYDEKSNKFLDCISNVQHV--GHCHPKVVEAISKQLATSTCNVR- 102
Query: 358 FYSDQLGK-YEKYMTELFGYDRLLPMNTGVEGGESACKIARKW 483
F S QL E+ ++ L G D +L N+G E + A ++AR +
Sbjct: 103 FVSTQLTDCAEQILSTLPGLDTVLFCNSGSEANDLALRLARDY 145
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 55.6 bits (128), Expect = 3e-08
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +1
Query: 178 YAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRA 357
Y+ P + R +++D + K+ D +S V GHCHP+++EA+ KQ T R
Sbjct: 46 YSDDPFMVSRASMQYLYDEKSNKFLDCISNVQHV--GHCHPKVVEAISKQLATSTCNVR- 102
Query: 358 FYSDQLGK-YEKYMTELFGYDRLLPMNTGVEGGESACKIARKW 483
F S QL E+ ++ L G D +L N+G E + A ++AR +
Sbjct: 103 FVSTQLTDCAEQILSTLPGLDTVLFCNSGSEANDLALRLARDY 145
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 206 RHKATGKGA*FLQPYLSSNWKISLDDKFCSAIILQ 102
R A+G G+ F+Q +L S W+ +L + C AI+ Q
Sbjct: 147 RSTASGSGSTFVQGFLDSQWRPNLTLEECKAIVKQ 181
>AC006723-5|AAK68424.1| 575|Caenorhabditis elegans Hypothetical
protein Y19D10B.5 protein.
Length = 575
Score = 30.7 bits (66), Expect = 0.96
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 575 DDTADRV-RPQKFPSAKIILAWPSGIFLTSYPHLRAILHALSPPSTPVFIGSRRSY 411
+D AD V RPQ FPS KI L W + L+ + LR + + S ST + + SY
Sbjct: 156 NDLADSVGRPQYFPSKKICLFW---VMLSWF--LRRLQYVESDESTLLLFANTMSY 206
>AF025456-1|AAB70959.3| 438|Caenorhabditis elegans Hypothetical
protein C46F9.4 protein.
Length = 438
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 226 WDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSDQ 372
W VE +K +FL+ Y Q C R IE + + L S YSDQ
Sbjct: 178 WRVEIRKLNEFLAIYLLCEQEICEERSIECVLE--FRLISASGKSYSDQ 224
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 349 SRAFYSDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKIAR 477
S+AFY G Y +Y+ E+ DR + + + A IA+
Sbjct: 116 SKAFYLKMKGDYYRYLAEVASEDRAAVVEKSQKAYQEALDIAK 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,439,466
Number of Sequences: 27780
Number of extensions: 365901
Number of successful extensions: 1028
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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