Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16e05
(602 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0243 - 23858975-23860706,23861178-23861230,23861338-238615... 34 0.075
08_01_0054 - 367770-370166 33 0.13
01_06_1372 + 36726129-36728240 32 0.30
08_01_0074 + 530207-532603 31 0.53
01_06_1777 + 39818212-39819696 31 0.70
01_05_0680 - 24238840-24241242 31 0.70
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 30 1.2
02_04_0076 - 19486360-19488723 30 1.2
01_05_0271 + 20276965-20278674 30 1.2
08_01_0918 + 9043949-9045625 30 1.6
03_02_0050 + 5272471-5274861 30 1.6
01_01_1125 - 8920590-8924372 29 2.1
08_02_0478 + 17621678-17623768 29 2.8
03_05_1045 - 29914581-29914829,29914840-29916083,29919055-299191... 29 2.8
10_02_0094 - 5228472-5228703,5229040-5229133,5230627-5230675,523... 29 3.7
06_01_1000 - 7778907-7780721 29 3.7
01_07_0382 + 43188478-43190919 29 3.7
10_06_0154 - 11291630-11292106,11292192-11292457,11293027-112931... 28 5.0
07_03_1263 + 25279899-25279985,25280263-25282372,25282700-252827... 28 5.0
03_05_0213 - 22037268-22039496 28 5.0
01_06_1124 - 34679205-34680926,34681438-34682811 28 5.0
10_08_0494 - 18308105-18309490 28 6.5
02_05_1236 + 35141404-35142731,35142753-35143089,35143228-351433... 28 6.5
12_01_1023 + 10458092-10458397,10459126-10459254,10459335-104595... 27 8.7
10_06_0130 - 11055305-11055593,11055666-11055949,11057271-110573... 27 8.7
07_01_0795 - 6257985-6258149,6258276-6258380,6259196-6259328,626... 27 8.7
06_03_0123 - 16924074-16926089 27 8.7
>04_04_0243 -
23858975-23860706,23861178-23861230,23861338-23861538,
23861649-23861990,23862277-23862423,23862945-23863086,
23863876-23863959,23864772-23864779
Length = 902
Score = 34.3 bits (75), Expect = 0.075
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 460 YADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILIGACAD 600
Y +I + K R+ EA+ V + ML + +VKPE ++N LIG D
Sbjct: 558 YGTVISGWCKVGRVDEAVKVFD-EMLTKGEVKPEAVMYNALIGGYCD 603
>08_01_0054 - 367770-370166
Length = 798
Score = 33.5 bits (73), Expect = 0.13
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +1
Query: 328 DPDKF--GTLSGFKIQDEKLVDAGDIKEEEYTQNKPLPGKKLTTRQYADLIKQYIKHKRL 501
+PD F TL G+ ++ + ++A I + + G K + Y L+ Y L
Sbjct: 305 EPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKR-----GHKPNSATYGTLLHGYATEGSL 359
Query: 502 KEAIDVLEVRMLQEDKVKPENYIFNILIG 588
+ +L+ M+ + ++P++YIFNILIG
Sbjct: 360 VKMHHLLD--MMVRNGIQPDHYIFNILIG 386
>01_06_1372 + 36726129-36728240
Length = 703
Score = 32.3 bits (70), Expect = 0.30
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
Frame = +1
Query: 196 LRNIKTIHFIRRSFFSTSIIQNNQSKYPKHTEFRTEHNQLVYLDDPDKFGTLSGFKIQDE 375
LRN++T + + + F + ++ + + + D FGTL Q+
Sbjct: 365 LRNLRTYNIMIKGLFDSGMVDEAIELWD------LLEKDVACIPDTVTFGTLIHGLCQNG 418
Query: 376 KLVDAGDIKEEEYTQNKPLPGKKLTTRQYADLIKQYIKHKRLKEAIDVLEVRMLQEDKVK 555
A I EE GK+L Y+ +I RL +A+ V E + +D K
Sbjct: 419 FANKAFTIFEEARVS-----GKQLDVFSYSSMINGLCNVGRLVDAVKVYE--KMDKDGCK 471
Query: 556 PENYIFNILI-GAC 594
P ++I+N LI G C
Sbjct: 472 PNSHIYNALISGFC 485
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 460 YADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILIGAC 594
Y+ L+ K RL A+D+L+ + +V+P+ +N L+G C
Sbjct: 196 YSTLMCGLAKQDRLDHALDLLDE--MPRSRVQPDVVCYNALLGGC 238
>08_01_0074 + 530207-532603
Length = 798
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 436 GKKLTTRQYADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILIGACA 597
G K + Y L+ Y L + +L+V + + +P++YIFNILIGA A
Sbjct: 306 GHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMV--RNGTQPDHYIFNILIGAYA 357
>01_06_1777 + 39818212-39819696
Length = 494
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 346 TLSGFKIQDEKLVDAGDIKE-EEYTQNKPLPGKKLTTRQYADLIKQYIKHKRLKEAIDVL 522
T++ F++ L D G + E + + G K T Y I + RL EA+ VL
Sbjct: 293 TVASFEVMVIDLYDEGRLNEADNLFKEMGKKGFKPTIYMYEAKITSLCREGRLDEAVKVL 352
Query: 523 EVRMLQEDKVKPENYIFNILI-GAC 594
E + + D + P +N+L+ G C
Sbjct: 353 EEELPKNDLI-PTVTTYNLLMRGLC 376
>01_05_0680 - 24238840-24241242
Length = 800
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 379 LVDAGDIKEEEYTQNKPLP-GKKLTTRQYADLIKQYIKHKRLKEAIDVLEVRMLQEDKVK 555
LV G ++E + +++ L GKK++ L+ Y + +++A+D+ E + D +
Sbjct: 257 LVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETL--RDGLV 314
Query: 556 PENYIFNILIGACAD 600
P + + +LI C +
Sbjct: 315 PTDVTYTVLIRGCTE 329
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +1
Query: 457 QYADLIKQYIKHKRLKEAIDVLEVRMLQEDKVK----PENYIFNILIGACAD 600
Q A ++ K +RLKE ID+ + ++ ED++K P++ ++L C D
Sbjct: 267 QGASMVTTSTKRERLKENIDIFDWQLSDEDRLKISQIPQHKTVSVLSILCPD 318
>02_04_0076 - 19486360-19488723
Length = 787
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 469 LIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILIGACA 597
L+ Y H EA+D+L +RM+ E ++P+ ++F++ + ACA
Sbjct: 75 LMSGYATHGPASEALDLL-LRMV-EWPLRPDAFVFSVALRACA 115
>01_05_0271 + 20276965-20278674
Length = 569
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 430 LPGKKLTTRQYADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILIGAC 594
+P K L Y +I H +AI+VL+ + DK+KP++ F+ L+ AC
Sbjct: 382 MPDKNLV--MYNTVISNLGSHGFAMKAIEVLDEMV--SDKLKPDSVTFSALLAAC 432
>08_01_0918 + 9043949-9045625
Length = 558
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 436 GKKLTTRQYADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILIGAC 594
G K Y+ L+ Y L E D+L+ ++ + ++P+ ++F+ILI AC
Sbjct: 341 GLKPNVITYSTLLHGYATKGALVEMRDLLD--LMVRNGIQPDRHVFSILICAC 391
>03_02_0050 + 5272471-5274861
Length = 796
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +1
Query: 460 YADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILIGA 591
Y LIK + +RLKEAID ++ L E + P+ +NI+I A
Sbjct: 527 YNTLIKGLCRMERLKEAID--KLNELVEKGLVPDETTYNIIIHA 568
>01_01_1125 - 8920590-8924372
Length = 1260
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 460 YADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILI 585
Y LI + K RL +A + VR L++ V + Y+++ILI
Sbjct: 482 YTSLIGGFCKRNRLDDAFSI--VRKLEQTGVVVDEYVYSILI 521
>08_02_0478 + 17621678-17623768
Length = 696
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 526 VRMLQEDKVKPENYIFNILIGACAD 600
VRM+QE V P+ Y F +I +C++
Sbjct: 284 VRMMQESGVHPDMYSFTSIISSCSE 308
>03_05_1045 -
29914581-29914829,29914840-29916083,29919055-29919199,
29919727-29919792,29919882-29920108,29920204-29920310,
29920428-29920502,29920600-29920688,29920768-29920848,
29921631-29921702,29922056-29922178
Length = 825
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 460 YADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILIGACA 597
+ ++ + H R +EA+ L+ RM +ED V+P+ + ACA
Sbjct: 616 WGTMVGAFAVHGRAEEAVSCLD-RMAREDGVRPDGVAVLGALSACA 660
>10_02_0094 -
5228472-5228703,5229040-5229133,5230627-5230675,
5231229-5231321,5231404-5231635,5232416-5232506,
5232693-5232784,5232862-5232970,5233331-5233430,
5233614-5233754,5233846-5234010,5234088-5234279,
5234409-5234537,5234619-5234734,5234821-5234965,
5235039-5235102,5235241-5235463,5235584-5236244,
5236909-5237250
Length = 1089
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 532 MLQEDKVKPENYIFNILIGACAD 600
++ KVKP+ +FN LI AC +
Sbjct: 556 IMSSKKVKPDRVVFNALISACGE 578
>06_01_1000 - 7778907-7780721
Length = 604
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 460 YADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILI 585
+ L+ Y K ++ EA+ +L R + E + P N I+N LI
Sbjct: 461 FGTLVHGYCKVGKIDEALRIL--RSMDESGIHPNNVIYNTLI 500
>01_07_0382 + 43188478-43190919
Length = 813
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 454 RQYADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILIGACA 597
R Y DLI+ Y A + R + +V P NY F + AC+
Sbjct: 89 RTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACS 136
>10_06_0154 -
11291630-11292106,11292192-11292457,11293027-11293131,
11293210-11293234,11293349-11293465,11293528-11294041,
11295524-11295578,11295980-11296060,11296129-11296219,
11296321-11296417,11297465-11297529,11297950-11298108,
11298208-11298455,11300667-11300835
Length = 822
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +1
Query: 373 EKLVDAGDIKEEEYTQNKPLPGKKLTTRQYADLIKQYIKHKRLKEAIDVLEVRMLQEDK 549
+K+ + G I EE Y + ++ +QY +L + +R KE + +++ + + + K
Sbjct: 645 DKMKNEGVISEESYMNPQAQSTERYKIKQYEELNLEIAMRERDKEEVSIVDKKCIGKKK 703
>07_03_1263 +
25279899-25279985,25280263-25282372,25282700-25282793,
25283178-25283314,25283419-25283454,25283602-25283642,
25284036-25284125,25284229-25284284,25284947-25285030,
25285072-25285150
Length = 937
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 460 YADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILI 585
Y LI + +H+ LKEA+ + E ++ ++K+ P IL+
Sbjct: 461 YTSLIYAFCRHRYLKEALGLFE--LMLDNKINPNIITCTILV 500
>03_05_0213 - 22037268-22039496
Length = 742
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 469 LIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILIGA 591
LI RL+EA+D+ R + V P+ Y FNILI A
Sbjct: 362 LIAALCTGNRLEEALDL--ARQVTVKGVSPDVYTFNILINA 400
>01_06_1124 - 34679205-34680926,34681438-34682811
Length = 1031
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +1
Query: 430 LPGKKLTTRQYADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILIGACA 597
+P K L + ++ +I Y + +A+++ R +Q KVKP+ + ++ +CA
Sbjct: 745 IPKKDLIS--WSSMISGYSQANHFSDALEIF--RQMQRAKVKPDAIVIASVVSSCA 796
>10_08_0494 - 18308105-18309490
Length = 461
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +1
Query: 436 GKKLTTRQYADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILIGACA 597
G K Y L++ Y L E D+L++ + + ++P +++FNILI A A
Sbjct: 327 GLKPDITTYCTLLQGYATKGALVEMHDLLDLMVW--NGIQPNHHVFNILICAYA 378
>02_05_1236 +
35141404-35142731,35142753-35143089,35143228-35143305,
35143395-35143703,35144449-35144572,35144620-35144789
Length = 781
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 451 TRQYADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILIGACAD 600
T + LI Y+ +A +V R++ + ++P+ + LIGACA+
Sbjct: 163 TVSFNTLISSYVHSCCSSDAFEVF--RIMVDSGLRPDGWTVTALIGACAE 210
>12_01_1023 +
10458092-10458397,10459126-10459254,10459335-10459553,
10459649-10459987,10460095-10460199,10460697-10460807,
10461438-10461688,10462023-10462146,10462440-10462716,
10463212-10463357,10463449-10463598,10463678-10463910,
10464246-10464375,10464406-10464510,10464636-10464914
Length = 967
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 283 HTEFRTEHNQLVYLD-DPDKFGTLSGFKIQDEKLVD--AGDIKEEEYTQNKPLPGKKLTT 453
H + NQ+ D DP+K S ++ Q ++++ +KE E +N + ++
Sbjct: 490 HLSYNMLLNQIRCEDGDPEKLLRHSFYQFQADRVLPDLEKQVKELELERNSMIIEEEENL 549
Query: 454 RQYADLIKQYIKHKR 498
+ Y DL++QY K+
Sbjct: 550 KSYYDLLQQYKNLKK 564
>10_06_0130 -
11055305-11055593,11055666-11055949,11057271-11057398,
11058522-11058606,11058917-11060872
Length = 913
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 430 LPGKKLTTRQYADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILI 585
L G L Y LIK K + ++ +LE + E +KP N +NILI
Sbjct: 514 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE--MAEKGIKPNNVSYNILI 563
>07_01_0795 -
6257985-6258149,6258276-6258380,6259196-6259328,
6260225-6260289,6260569-6261642,6262328-6262433,
6262872-6263044,6263352-6263765
Length = 744
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 436 GKKLTTRQYADLIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILI 585
G L T Y IK Y+ ++A+++ ++E VKP+ +NILI
Sbjct: 513 GIDLNTVAYNSGIKSYLSFGDYEKALELYT--SMRESNVKPDAVTYNILI 560
>06_03_0123 - 16924074-16926089
Length = 671
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 469 LIKQYIKHKRLKEAIDVLEVRMLQEDKVKPENYIFNILIGACA 597
LI + +H AI + + M+QE+ V P++Y F L+ +C+
Sbjct: 482 LITSFSQHGNEVAAIQLFD--MMQEEMVCPDDYTFVGLLSSCS 522
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,514,082
Number of Sequences: 37544
Number of extensions: 216649
Number of successful extensions: 561
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -