Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16e05
(602 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr... 29 1.9
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro... 29 1.9
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 3.4
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 3.4
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 3.4
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 3.4
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 3.4
AC006605-8|AAK85439.2| 741|Caenorhabditis elegans Ligase protei... 28 4.5
>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical protein
F33C8.1b protein.
Length = 1234
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 571 IYNF--PVSLYLPVAFSPPIHQ*LLLIFYALCIV 476
+YNF PV + + A SPPI+ L + +A C +
Sbjct: 1117 VYNFNTPVQIVVSFAQSPPINWVLFFVIFAACFI 1150
>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical protein
F33C8.1a protein.
Length = 1271
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 571 IYNF--PVSLYLPVAFSPPIHQ*LLLIFYALCIV 476
+YNF PV + + A SPPI+ L + +A C +
Sbjct: 1154 VYNFNTPVQIVVSFAQSPPINWVLFFVIFAACFI 1187
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical
protein F48E3.3 protein.
Length = 1493
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Frame = +1
Query: 316 VYLDDPDKFGTLSGFKIQD------EKLVDAGDIKE----EEYTQNKPLPGKKLTTRQYA 465
V L + D+ L +++QD +K+V+AG EEY+QN P + L +
Sbjct: 269 VNLKESDELTPLKRWELQDLSYQAAQKIVNAGPADAIGTLEEYSQNFPTHARALAKTSVS 328
Query: 466 DLI-KQYIKHKRLKEAIDV 519
DL+ K+ ++++++ E +
Sbjct: 329 DLLRKEVLQNRKMLEKASI 347
>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin protein.
Length = 1329
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 571 IYNF--PVSLYLPVAFSPPIHQ*LLLIFYALCIV 476
+YNF PV + + A SPPI+ L + +A C +
Sbjct: 1154 VYNFNTPVQIVVSFAQSPPINWVLFFVIFAACFI 1187
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 334 DKFGTLSGFKIQDEKLVDAGDIKEEEYTQNKPLPGKKLTTR-QYADLIKQYI-KHKRLKE 507
DK ++ GFK EK+V EE+ K L K +Y DL+ + + ++L +
Sbjct: 2935 DKKPSVDGFKAMIEKIVAEASSDEEK----KALGNKNAQIEDRYKDLLNSAVDRQRKLLD 2990
Query: 508 AIDVLEVRMLQEDKVKPENYI 570
A+D+ E LQE + ++++
Sbjct: 2991 AVDLAE--RLQEVTIPLDSWL 3009
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 334 DKFGTLSGFKIQDEKLVDAGDIKEEEYTQNKPLPGKKLTTR-QYADLIKQYI-KHKRLKE 507
DK ++ GFK EK+V EE+ K L K +Y DL+ + + ++L +
Sbjct: 2935 DKKPSVDGFKAMIEKIVAEASSDEEK----KALGNKNAQIEDRYKDLLNSAVDRQRKLLD 2990
Query: 508 AIDVLEVRMLQEDKVKPENYI 570
A+D+ E LQE + ++++
Sbjct: 2991 AVDLAE--RLQEVTIPLDSWL 3009
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 334 DKFGTLSGFKIQDEKLVDAGDIKEEEYTQNKPLPGKKLTTR-QYADLIKQYI-KHKRLKE 507
DK ++ GFK EK+V EE+ K L K +Y DL+ + + ++L +
Sbjct: 2390 DKKPSVDGFKAMIEKIVAEASSDEEK----KALGNKNAQIEDRYKDLLNSAVDRQRKLLD 2445
Query: 508 AIDVLEVRMLQEDKVKPENYI 570
A+D+ E LQE + ++++
Sbjct: 2446 AVDLAE--RLQEVTIPLDSWL 2464
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 334 DKFGTLSGFKIQDEKLVDAGDIKEEEYTQNKPLPGKKLTTR-QYADLIKQYI-KHKRLKE 507
DK ++ GFK EK+V EE+ K L K +Y DL+ + + ++L +
Sbjct: 2935 DKKPSVDGFKAMIEKIVAEASSDEEK----KALGNKNAQIEDRYKDLLNSAVDRQRKLLD 2990
Query: 508 AIDVLEVRMLQEDKVKPENYI 570
A+D+ E LQE + ++++
Sbjct: 2991 AVDLAE--RLQEVTIPLDSWL 3009
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 334 DKFGTLSGFKIQDEKLVDAGDIKEEEYTQNKPLPGKKLTTR-QYADLIKQYI-KHKRLKE 507
DK ++ GFK EK+V EE+ K L K +Y DL+ + + ++L +
Sbjct: 2935 DKKPSVDGFKAMIEKIVAEASSDEEK----KALGNKNAQIEDRYKDLLNSAVDRQRKLLD 2990
Query: 508 AIDVLEVRMLQEDKVKPENYI 570
A+D+ E LQE + ++++
Sbjct: 2991 AVDLAE--RLQEVTIPLDSWL 3009
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 334 DKFGTLSGFKIQDEKLVDAGDIKEEEYTQNKPLPGKKLTTR-QYADLIKQYI-KHKRLKE 507
DK ++ GFK EK+V EE+ K L K +Y DL+ + + ++L +
Sbjct: 2390 DKKPSVDGFKAMIEKIVAEASSDEEK----KALGNKNAQIEDRYKDLLNSAVDRQRKLLD 2445
Query: 508 AIDVLEVRMLQEDKVKPENYI 570
A+D+ E LQE + ++++
Sbjct: 2446 AVDLAE--RLQEVTIPLDSWL 2464
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 334 DKFGTLSGFKIQDEKLVDAGDIKEEEYTQNKPLPGKKLTTR-QYADLIKQYI-KHKRLKE 507
DK ++ GFK EK+V EE+ K L K +Y DL+ + + ++L +
Sbjct: 2935 DKKPSVDGFKAMIEKIVAEASSDEEK----KALGNKNAQIEDRYKDLLNSAVDRQRKLLD 2990
Query: 508 AIDVLEVRMLQEDKVKPENYI 570
A+D+ E LQE + ++++
Sbjct: 2991 AVDLAE--RLQEVTIPLDSWL 3009
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 334 DKFGTLSGFKIQDEKLVDAGDIKEEEYTQNKPLPGKKLTTR-QYADLIKQYI-KHKRLKE 507
DK ++ GFK EK+V EE+ K L K +Y DL+ + + ++L +
Sbjct: 2935 DKKPSVDGFKAMIEKIVAEASSDEEK----KALGNKNAQIEDRYKDLLNSAVDRQRKLLD 2990
Query: 508 AIDVLEVRMLQEDKVKPENYI 570
A+D+ E LQE + ++++
Sbjct: 2991 AVDLAE--RLQEVTIPLDSWL 3009
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 334 DKFGTLSGFKIQDEKLVDAGDIKEEEYTQNKPLPGKKLTTR-QYADLIKQYI-KHKRLKE 507
DK ++ GFK EK+V EE+ K L K +Y DL+ + + ++L +
Sbjct: 2390 DKKPSVDGFKAMIEKIVAEASSDEEK----KALGNKNAQIEDRYKDLLNSAVDRQRKLLD 2445
Query: 508 AIDVLEVRMLQEDKVKPENYI 570
A+D+ E LQE + ++++
Sbjct: 2446 AVDLAE--RLQEVTIPLDSWL 2464
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 334 DKFGTLSGFKIQDEKLVDAGDIKEEEYTQNKPLPGKKLTTR-QYADLIKQYI-KHKRLKE 507
DK ++ GFK EK+V EE+ K L K +Y DL+ + + ++L +
Sbjct: 2935 DKKPSVDGFKAMIEKIVAEASSDEEK----KALGNKNAQIEDRYKDLLNSAVDRQRKLLD 2990
Query: 508 AIDVLEVRMLQEDKVKPENYI 570
A+D+ E LQE + ++++
Sbjct: 2991 AVDLAE--RLQEVTIPLDSWL 3009
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 334 DKFGTLSGFKIQDEKLVDAGDIKEEEYTQNKPLPGKKLTTR-QYADLIKQYI-KHKRLKE 507
DK ++ GFK EK+V EE+ K L K +Y DL+ + + ++L +
Sbjct: 2935 DKKPSVDGFKAMIEKIVAEASSDEEK----KALGNKNAQIEDRYKDLLNSAVDRQRKLLD 2990
Query: 508 AIDVLEVRMLQEDKVKPENYI 570
A+D+ E LQE + ++++
Sbjct: 2991 AVDLAE--RLQEVTIPLDSWL 3009
>AC006605-8|AAK85439.2| 741|Caenorhabditis elegans Ligase protein 4
protein.
Length = 741
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 361 KIQDEKLVDAGDIKEEEYTQNKP--LPGKKLTTRQYADLIKQYIKHKRLKEAIDVLEVRM 534
K+Q+ KL D D EE+ KP L +++T + +K +L+ ++ +EV +
Sbjct: 590 KVQECKLGDNVDSDEEDSEDKKPDTLKVERITRKAIHQSAPVRLKRAKLESSLTGIEVAV 649
Query: 535 LQ 540
LQ
Sbjct: 650 LQ 651
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,061,787
Number of Sequences: 27780
Number of extensions: 234247
Number of successful extensions: 588
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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