Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16e03
(608 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 36 0.004
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 34 0.019
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 33 0.043
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 32 0.075
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 32 0.075
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 31 0.17
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 31 0.17
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 29 0.53
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 29 0.70
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.70
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 28 0.93
SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr 3|||... 28 1.2
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 27 2.1
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 27 2.1
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 2.8
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.8
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 26 3.7
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 3.7
SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.7
SPAC3H1.03 |mug151||transcriptional regulator, HCNGP-like |Schiz... 26 5.0
SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase |Schi... 25 6.5
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 25 6.5
SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces p... 25 8.7
SPAC12G12.02 ||SPAC630.01c|rRNA processing protein, unnamed|Schi... 25 8.7
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 25 8.7
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 36.3 bits (80), Expect = 0.004
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 251 QLRIALEQLKNTREKYDILLQESEQNEEEML-SVISKNTDLKKQLSQLFIEHSEALEINQ 427
QL+ E++ NT+E D+ ++E EE++ S+ + T+L++Q H E L+ Q
Sbjct: 607 QLKSLREEIDNTKEALDLSVKERSIQEEKLNESLKTSKTNLEEQTQLAEKYHEELLDNQQ 666
Query: 428 KLQD 439
KL D
Sbjct: 667 KLYD 670
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 33.9 bits (74), Expect = 0.019
Identities = 30/125 (24%), Positives = 59/125 (47%)
Frame = +2
Query: 227 IKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHS 406
+ S Q D+QL+ ++ KY++ Q++ ++E E ++ N L + L E +
Sbjct: 817 LSSTQNDKQLKKRDAEIIEL--KYELKKQQNSKSEVER-DLVETNNSLTAVENLLTTERA 873
Query: 407 EALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISGLRSELYKLKEQQPQ 586
AL+ + L+ T + D F ++ + L+ + A + L SEL + K + +
Sbjct: 874 IALDKEEILRRTQERLANIEDSFSETKQQNENLQRESASLKQINNELESELLE-KTSKVE 932
Query: 587 SLYSE 601
+L SE
Sbjct: 933 TLLSE 937
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 32.7 bits (71), Expect = 0.043
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 239 QVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLF--IEHSEA 412
Q +E++ ++ ++L E +QN+E+ +++ L+ Q SQL IE S+
Sbjct: 262 QREERIERIKAEITELNHSLELLRVEKQQNDEDYTNIMKSKVALELQSSQLSRQIEFSKK 321
Query: 413 LEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISGLRSELYKLKEQQPQSL 592
E + KL S+ S++ + +I + ++EADD L + LK Q+ QSL
Sbjct: 322 DE-SSKLNILSELESKISEKENELSEILPKYNAIVSEADD----LNKRIMLLKNQK-QSL 375
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.9 bits (69), Expect = 0.075
Identities = 28/128 (21%), Positives = 58/128 (45%)
Frame = +2
Query: 221 RSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIE 400
R + ++QLR + ++L + E+YD+L E + E E+ + +K+ L +
Sbjct: 55 RIVTEVNYEQQLRNSEKKLLQSNERYDLLEDERKLLENEL-------SQIKEYLREKSSS 107
Query: 401 HSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISGLRSELYKLKEQQ 580
+ L L+ Q D+ +LK TA+L++ L++ + + + + LK+
Sbjct: 108 YDTVLHDCSSLKSVNEALKQAQDQ---NLKQTAQLQNLLSDKEKEVEKKITIIKDLKDAL 164
Query: 581 PQSLYSEL 604
S + L
Sbjct: 165 ASSTHQVL 172
Score = 26.2 bits (55), Expect = 3.7
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +2
Query: 269 EQLKNTREKYDILLQESEQNEEEMLSVI-SKNTDLKKQLSQLFIEHSEALEINQKLQDTI 445
++LK + L +Q+ M + I S N + + + +S LE++ L+
Sbjct: 796 DKLKADLSNLESKLSSLQQDNFHMKAQIESSNQEYTATVDSM---NSRILELSNDLRVAN 852
Query: 446 NTFSQCSDEFCDSLKITAELRHKLAEADDCISGLRSELYKLKE 574
+ S+CSD D ++T + L E + L+S + +LK+
Sbjct: 853 SKLSECSD---DVRRLTLQNSFDLREHQTLVLQLQSNITELKQ 892
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.9 bits (69), Expect = 0.075
Identities = 26/121 (21%), Positives = 58/121 (47%)
Frame = +2
Query: 218 TRSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFI 397
T SIK+ ++++ LR + LK++R + Q EEEM+ + N + QL+
Sbjct: 340 TLSIKNEKLEKLLRNTIGSLKDSRTS-------NSQLEEEMVELKESNRTIHSQLTDAES 392
Query: 398 EHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISGLRSELYKLKEQ 577
+ S + N+ L+ +I+ + + K+ ++ +L EA ++ +L ++ +
Sbjct: 393 KLSSFEQENKSLKGSIDEY---QNNLSSKDKMVKQVSSQLEEARSSLAHATGKLAEINSE 449
Query: 578 Q 580
+
Sbjct: 450 R 450
Score = 29.9 bits (64), Expect = 0.30
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Frame = +2
Query: 248 EQLRIALEQ-LKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEIN 424
E L I+LE+ L N R+K LL + E + KN+ L +++ + +S + +
Sbjct: 1417 ESLIISLEESLSNQRQKESSLLDAKNELEHMLDDTSRKNSSLMEKIESI---NSSLDDKS 1473
Query: 425 QKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISGLRSELYKLKEQ 577
+L + +SL + ++ +L EA + I S + +L +
Sbjct: 1474 FELASAVEKLGALQKLHSESLSLMENIKSQLQEAKEKIQVDESTIQELDHE 1524
Score = 28.7 bits (61), Expect = 0.70
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Frame = +2
Query: 236 RQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEAL 415
++++ + +QLK+T K L E E++ ++ +N DL+ +L +L E +++L
Sbjct: 619 QELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKL-EESNKSL 677
Query: 416 EINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEAD---DCISGLRSELYKLKEQQPQ 586
Q+ D++ Q E D K LR EA + I L+ + ++ E Q
Sbjct: 678 IKKQEDVDSLEKNIQTLKE--DLRKSEEALRFSKLEAKNLREVIDNLKGK-HETLEAQRN 734
Query: 587 SLYSEL 604
L+S L
Sbjct: 735 DLHSSL 740
Score = 28.7 bits (61), Expect = 0.70
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
Frame = +2
Query: 266 LEQLKNTREKYDILLQESEQ---------NEEEMLSVISKNTDLK--KQLSQLFIEHSEA 412
L QL + YD L QES Q E+++L ++ ++ K +L IE S++
Sbjct: 884 LTQLAELSKNYDSLEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLKIEESKS 943
Query: 413 LEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISGLRSELYKLKEQ 577
++ +KL S +E + ++ KL E S L +++ LK +
Sbjct: 944 SDLGKKLTARQEEISNLKEENMSQSQAITSVKSKLDETLSKSSKLEADIEHLKNK 998
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 30.7 bits (66), Expect = 0.17
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 278 KNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEA 412
K TR+ Y+ Q++ + EE++ +++K LKK + L E SEA
Sbjct: 425 KKTRQSYE---QQTVKIEEQLKFLLNKEKKLKKSIEALSFEKSEA 466
Score = 25.8 bits (54), Expect = 5.0
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = -2
Query: 442 RILQLLIDLKSFTVFNEELRQLFFKVS 362
RILQL DLKS NE R L K+S
Sbjct: 873 RILQLKSDLKSIRNNNERKRNLQNKIS 899
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 30.7 bits (66), Expect = 0.17
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Frame = +2
Query: 266 LEQLKNTREKYDILLQESEQNEEEML---SVISKNTDLKKQLSQLFIEHSEALEINQKLQ 436
LEQLK T + D L +E+E+N++ + S + K+ D K L++ ++ L +
Sbjct: 651 LEQLKMTEAEVDSLRKENEENKQVIALKESELVKSNDNKLLLNEQIESLNDQLSQLKTEM 710
Query: 437 DTINTFSQCSDEFCDSLK-----ITAELRHKLAEADDCISGLRSELYKLKEQQPQ 586
+++ T + ++ +LK L KL E + +S S +++E+ Q
Sbjct: 711 ESVTTSKESLADYLSNLKERHNDELDSLNKKLREFEGILSSNSSLKSEIEERNNQ 765
Score = 29.5 bits (63), Expect = 0.40
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +2
Query: 290 EKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQDTINTFSQCSD 469
EK++ ++E+E++ + K TD QLS+ + + + QK T+ + +
Sbjct: 581 EKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNKAK 640
Query: 470 EFCDSLKITAELRHKLAEADDCISGLRSE 556
E DS T+ L +L + + LR E
Sbjct: 641 E--DSTSKTSNLLEQLKMTEAEVDSLRKE 667
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 29.1 bits (62), Expect = 0.53
Identities = 31/112 (27%), Positives = 53/112 (47%)
Frame = +2
Query: 230 KSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSE 409
K +++ EQ R Q ++ D+L + + ++E + KNTD+KK L + IE
Sbjct: 372 KLKELHEQNRRLQRQKSLATQEIDLLRENLKSYDDEEAILSEKNTDMKK-LER--IEGLV 428
Query: 410 ALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISGLRSELYK 565
L KL+ S DE D +++ + R + E D +G +ELY+
Sbjct: 429 KLVDEYKLKLESMPVSLDVDETSD--EVSLQKRRRKNEHKD--AGYVTELYR 476
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 28.7 bits (61), Expect = 0.70
Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +2
Query: 224 SIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEH 403
++K+R + + L+ +N Y LQE E + S + ++ KQ+ +++ +H
Sbjct: 495 AMKARDILMTEKKTLKLAENKEHDYIGKLQEREHALTKYESSLKAELEVYKQIKEIYGKH 554
Query: 404 S-EALEINQKLQDTINTFSQCSDEFCDSLKITAE 502
S E L ++ LQ +Q ++ +S++ + E
Sbjct: 555 SVEVLTEDKHLQVKQTKLTQKLEDLIESVQKSGE 588
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.7 bits (61), Expect = 0.70
Identities = 23/106 (21%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Frame = +2
Query: 272 QLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLS-QLFIEHSEALEINQK---LQD 439
QL ++ +L++S EE++ S+ D+ + L Q+ + +E + +N L+D
Sbjct: 1137 QLSERIKEISEMLEQSIATEEKLRRKNSELCDIIEALKYQIQDQETEIISLNADNLDLKD 1196
Query: 440 TINTFSQCSDEFCDSLKITAELRHKLAEADDCISGLRSELYKLKEQ 577
T + + +F D I + HK+++ + + R ++ LK++
Sbjct: 1197 TNGVLEKNASDFIDFQGIKSRYEHKISDLLNQLQKERCKVGLLKQK 1242
Score = 27.5 bits (58), Expect = 1.6
Identities = 27/111 (24%), Positives = 49/111 (44%)
Frame = +2
Query: 242 VDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEI 421
V E+L Q+ EKY+ L E + EE++ +K T++ LS L + L
Sbjct: 900 VHERLSSLENQVTIADEKYEFLYAEKQSIEEDL---ANKQTEI-SYLSDLSSTLEKKLSS 955
Query: 422 NQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISGLRSELYKLKE 574
+K + TI+ S+ + D L I A+ +H + + + ++E
Sbjct: 956 IKKDEQTIS--SKYKELEKDYLNIMADYQHSSQHLSNLEKAINEKNLNIRE 1004
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 28.3 bits (60), Expect = 0.93
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +2
Query: 212 MMTRSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQL 391
+ T+ K+++ + +L E L+N R KY+ L+E E ++ + + +L Q+
Sbjct: 153 LSTKIQKAKKEESKLE---EDLRNARAKYEESLEEFEDRMVQLKELEPDRVENVVRLLQM 209
Query: 392 FIE-HSEALEINQKLQDTINTFSQCSD 469
I H ++L++ + L+ +N FS+ D
Sbjct: 210 QIRFHQKSLDLLKGLE--MNGFSKKRD 234
>SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 319
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 269 EQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKL-QDTI 445
+QL+ ++ D+LLQE E E + D+ + S++ + S +KL D +
Sbjct: 215 QQLQELEQENDVLLQEFEHTMERLRDTGKSLADITRLQSEISAQLSIQSSAAEKLYDDAL 274
Query: 446 NTFSQCS 466
N S
Sbjct: 275 NVMDSLS 281
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 27.1 bits (57), Expect = 2.1
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Frame = +2
Query: 230 KSRQVDE---QLRIALEQLKNTREKYDILLQESEQNEE----EMLSVISKNTDLKKQLSQ 388
K + +DE +L A + L + + I E+EQ E + L+ ++ D+KK+L +
Sbjct: 75 KEKPLDEKVKELENANKTLSDLVRRIQIQRDEAEQKAEIYNRDALNTKQEHLDIKKRLEK 134
Query: 389 LFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISGLRSEL 559
+ E N+ LQD + E D +K EL K + + SEL
Sbjct: 135 SDETVCKLKEENENLQDMLRNVGNELVESRDEIK---ELIEKQKVQKESVKSHESEL 188
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 27.1 bits (57), Expect = 2.1
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Frame = +2
Query: 221 RSIKSRQVDE-QLRIALEQLKNTREKYDILLQESEQNEEEMLS-------VISKNTDLKK 376
+S+K +Q D+ Q ++LKN E Y L +++E ++ +S + ++NT L K
Sbjct: 68 QSMKKQQKDKLQQENKDQELKNIEESYKKLEEKTEHLSDDNVSLEKRVEYLETENTKLVK 127
Query: 377 QLSQLFIEHSEALEINQKLQDTINTFSQCSDE 472
L+ L +SE L++ +K+ + Q + E
Sbjct: 128 TLNSL---NSEFLQLLRKIAINVKEGRQLTTE 156
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 2.8
Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = +2
Query: 248 EQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQ 427
EQ ++AL + + E+ Q ++++ E L + ++ KK + A E
Sbjct: 110 EQRQVALREAREAEEELQRARQYNDRSTSEALELEAR---AKKAAQDAELASERAREAQS 166
Query: 428 KLQDTINTFSQCSDEFCDSLKIT---AELRHKLAEADDCISGLRSEL 559
++ + + + + E + AEL+H+LA+A+ + S+L
Sbjct: 167 SIERSASLREKQAREEAERAATALREAELKHRLAQANADVDVANSKL 213
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.6 bits (56), Expect = 2.8
Identities = 17/73 (23%), Positives = 31/73 (42%)
Frame = +2
Query: 299 DILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQDTINTFSQCSDEFC 478
+ + +E E ++ + + T+ + E E INQ LQD I+ Q + +F
Sbjct: 678 EAIRKELENSKYQQQLSTDRLTNANNDVEAFKKEAKELRSINQNLQDIISRQDQRASKFA 737
Query: 479 DSLKITAELRHKL 517
+ L L +L
Sbjct: 738 EELLHVNSLAERL 750
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 26.2 bits (55), Expect = 3.7
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +2
Query: 233 SRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEA 412
+ ++ + LR AL++ K YD L +EE ++ S+ +L KQ+++ + E
Sbjct: 151 TEEMSKTLR-ALKEEKKMYFNYDNFLSSQTVHEENTAALDSEIDELMKQINEKEEKIEEI 209
Query: 413 LEINQKLQDTINTFSQ 460
+ KLQ + +
Sbjct: 210 SDETDKLQKLLRELDE 225
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 3.7
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 335 EMLSVISKN-TDLKKQLSQLFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRH 511
+ +SV+ + TD+K +L E EA+ QKL + S +++ LK ++ L++
Sbjct: 663 DKISVLQRQLTDVKDELDVSEEEREEAIVAGQKLSASFELMS--NEKQALELKYSS-LKN 719
Query: 512 KLAEADDCISGLRSELYKLKEQ 577
+L A + + EL +L ++
Sbjct: 720 ELINAQNLLDRREEELSELSKK 741
>SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 261
Score = 26.2 bits (55), Expect = 3.7
Identities = 25/110 (22%), Positives = 53/110 (48%)
Frame = +2
Query: 275 LKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQDTINTF 454
L+N +E+ + L+E E+ ++ N L ++ L + E N+K +N+F
Sbjct: 22 LQNLKEETENQLKELEKKRSQLHKEEQINLQLVYAINDLRSKTKELKAENEKEDTFLNSF 81
Query: 455 SQCSDEFCDSLKITAELRHKLAEADDCISGLRSELYKLKEQQPQSLYSEL 604
+ S + + KI +LR + + ++ + ++ K E+Q +S S+L
Sbjct: 82 N-ASGDLTANKKI--QLREQSRKLEESLLSYHKKV-KEMEKQHRSASSKL 127
>SPAC3H1.03 |mug151||transcriptional regulator, HCNGP-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 146
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 320 EQNEEEMLSVISKNTDLKKQLSQLF--IEHSEALEINQKLQDTINTF 454
+ EEE S++++N D+K + + I +S E++ +L+ I F
Sbjct: 7 DSEEEEQTSLVNENNDIKGRSEEPHWKIPNSPKAEVDTELEKKIKQF 53
>SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 466
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +2
Query: 308 LQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQDTINTFSQCSDEFCDSL 487
L E+++N +L V + +Q+++LFI+H+ I + D+ + + D
Sbjct: 387 LTEADRNAARVLFVHRNVPGVLRQVNELFIDHN----IKSQFSDSRGDIAYLVADISDCT 442
Query: 488 KITAELRHKLAEADDC 535
+ E H+ E+ C
Sbjct: 443 PGSLEALHQKLESLPC 458
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 266 LEQLKNTREKYDILLQESEQNEEEMLSV 349
LE L+N E + + E+ EEE++S+
Sbjct: 519 LESLRNNTEWISSVAENGEKTEEELISI 546
>SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 723
Score = 25.0 bits (52), Expect = 8.7
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 233 SRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEA 412
S D++ RI+ +L N RE +I Q ++Q+ E L +S + D EA
Sbjct: 596 SSSSDDEQRIS--EL-NDRELDEIDWQAADQDVENALKDLSDDNDFDTGSISASQSQPEA 652
Query: 413 LEINQKLQ 436
LE+N ++
Sbjct: 653 LEVNTPIK 660
>SPAC12G12.02 ||SPAC630.01c|rRNA processing protein,
unnamed|Schizosaccharomyces pombe|chr 1|||Manual
Length = 183
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 193 KICKENLRSCRSDYPQITKYYTLTK 119
K C++++R C+ D I +Y LTK
Sbjct: 96 KQCEKSMRKCQIDLMYIKEYPPLTK 120
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 439 ILQLLIDLKSFTVFNEELRQLFFKVSILRDD*QHL 335
++ L + S T+F EL FFKV ++ D H+
Sbjct: 532 VVNLTLSSFSNTMFENELPDSFFKVEDVKVDIHHI 566
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,947,853
Number of Sequences: 5004
Number of extensions: 34089
Number of successful extensions: 166
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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