Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16d15
         (629 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.80 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.80 
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   3.2  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   3.2  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    23   3.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.3  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   7.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.5  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 192 YDISFDTDIHTVFG 233
           YDIS  TD+H +FG
Sbjct: 84  YDISNYTDVHPIFG 97


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 192 YDISFDTDIHTVFG 233
           YDIS  TD+H +FG
Sbjct: 84  YDISNYTDVHPIFG 97


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 237 NARKQYGYQYRKIYRNLVATELSQLP 160
           N    Y   Y+K+Y+N +   + Q+P
Sbjct: 104 NYNNNYNNNYKKLYKNYI-INIEQIP 128


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 237 NARKQYGYQYRKIYRNLVATELSQLP 160
           N    Y   Y+K+Y+N +   + Q+P
Sbjct: 104 NYNNNYNNNYKKLYKNYI-INIEQIP 128


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 237 NARKQYGYQYRKIYRNLVATELSQLP 160
           N +K Y   YRK+Y N+   E   +P
Sbjct: 95  NYKKLYCNNYRKLYYNINYIEQIPIP 120


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 265 GAVQYRCKVPECEVSPPEFDTDFWGVWALPESGGRCDRLR 384
           G  ++RC+V     + P F T +     LP +G + + LR
Sbjct: 346 GNAEFRCEVSTHPQAGPHFITWYKDGRQLPGTGRQSELLR 385


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 265 GAVQYRCKVPECEVSPPEFDTDFWGVWALPESGGRCDRLR 384
           G  ++RC+V     + P F T +     LP +G + + LR
Sbjct: 346 GNAEFRCEVSTHPQAGPHFITWYKDGRQLPGTGRQSELLR 385


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 385 PVGGGCGPGSFHANETLT 438
           P G  CGPG+  A   L+
Sbjct: 151 PTGSSCGPGAAAAAALLS 168


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 130 SNELDMDAVWGELGQFGR 183
           SN  D+D V+G L  F R
Sbjct: 87  SNFTDVDPVYGTLADFDR 104



 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 192 YDISFDTDIHTVFGHL 239
           YDIS  TD+  V+G L
Sbjct: 84  YDISNFTDVDPVYGTL 99


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 70  DVKRVLDLCDVAVTMSRSTRSNEL 141
           DVK  L++ D+A+  S++T   ++
Sbjct: 782 DVKTTLNISDIALYPSQTTHGYDI 805


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,112
Number of Sequences: 438
Number of extensions: 4574
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)