Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16d14
(585 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81789-1|CAA57388.1| 501|Homo sapiens splicing factor SF3a60 pr... 168 1e-41
U08815-1|AAA19625.1| 501|Homo sapiens SAP 61 protein. 168 1e-41
BC011523-1|AAH11523.1| 501|Homo sapiens splicing factor 3a, sub... 168 1e-41
BC002395-1|AAH02395.1| 501|Homo sapiens splicing factor 3a, sub... 168 1e-41
AL603790-5|CAH69930.1| 501|Homo sapiens splicing factor 3a, sub... 168 1e-41
AK222554-1|BAD96274.1| 501|Homo sapiens splicing factor 3a, sub... 168 1e-41
BC130564-1|AAI30565.1| 905|Homo sapiens KIAA1524 protein. 36 0.11
BC017659-1|AAH17659.1| 285|Homo sapiens KIAA1524 protein protein. 36 0.11
AK022912-1|BAB14305.1| 472|Homo sapiens protein ( Homo sapiens ... 36 0.11
AF334474-1|AAL11632.1| 905|Homo sapiens p90 autoantigen protein. 36 0.11
AB040957-1|BAA96048.1| 884|Homo sapiens KIAA1524 protein protein. 36 0.11
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 34 0.42
AL365436-3|CAI16590.1| 1203|Homo sapiens cingulin protein. 31 2.3
AF263462-1|AAF74498.1| 1203|Homo sapiens cingulin protein. 31 2.3
AB037740-1|BAA92557.1| 1208|Homo sapiens KIAA1319 protein protein. 31 2.3
DQ120669-1|ABB92450.1| 681|Homo sapiens rcCTAGE5 protein. 29 9.1
BC036527-1|AAH36527.1| 811|Homo sapiens CTAGEP protein protein. 29 9.1
>X81789-1|CAA57388.1| 501|Homo sapiens splicing factor SF3a60
protein.
Length = 501
Score = 168 bits (408), Expect = 1e-41
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +1
Query: 262 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 441
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 442 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 585
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSV
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSV 108
>U08815-1|AAA19625.1| 501|Homo sapiens SAP 61 protein.
Length = 501
Score = 168 bits (408), Expect = 1e-41
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +1
Query: 262 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 441
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 442 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 585
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSV
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSV 108
>BC011523-1|AAH11523.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 168 bits (408), Expect = 1e-41
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +1
Query: 262 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 441
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 442 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 585
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSV
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSV 108
>BC002395-1|AAH02395.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 168 bits (408), Expect = 1e-41
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +1
Query: 262 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 441
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 442 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 585
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSV
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSV 108
>AL603790-5|CAH69930.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 168 bits (408), Expect = 1e-41
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +1
Query: 262 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 441
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 442 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 585
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSV
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSV 108
>AK222554-1|BAD96274.1| 501|Homo sapiens splicing factor 3a,
subunit 3 variant protein.
Length = 501
Score = 168 bits (408), Expect = 1e-41
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +1
Query: 262 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 441
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 442 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 585
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSV
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSV 108
>BC130564-1|AAI30565.1| 905|Homo sapiens KIAA1524 protein.
Length = 905
Score = 35.9 bits (79), Expect = 0.11
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +1
Query: 259 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 438
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 758 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 817
Query: 439 LYEDKDGLRKEEISAL 486
L ++++ ++E I L
Sbjct: 818 LQKERED-KEETIDIL 832
>BC017659-1|AAH17659.1| 285|Homo sapiens KIAA1524 protein protein.
Length = 285
Score = 35.9 bits (79), Expect = 0.11
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +1
Query: 259 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 438
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 138 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 197
Query: 439 LYEDKDGLRKEEISAL 486
L ++++ ++E I L
Sbjct: 198 LQKERED-KEETIDIL 212
>AK022912-1|BAB14305.1| 472|Homo sapiens protein ( Homo sapiens
cDNA FLJ12850 fis, clone NT2RP2003394, weakly similar to
INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1. ).
Length = 472
Score = 35.9 bits (79), Expect = 0.11
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +1
Query: 259 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 438
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 325 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 384
Query: 439 LYEDKDGLRKEEISAL 486
L ++++ ++E I L
Sbjct: 385 LQKERED-KEETIDIL 399
>AF334474-1|AAL11632.1| 905|Homo sapiens p90 autoantigen protein.
Length = 905
Score = 35.9 bits (79), Expect = 0.11
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +1
Query: 259 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 438
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 758 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 817
Query: 439 LYEDKDGLRKEEISAL 486
L ++++ ++E I L
Sbjct: 818 LQKERED-KEETIDIL 832
>AB040957-1|BAA96048.1| 884|Homo sapiens KIAA1524 protein protein.
Length = 884
Score = 35.9 bits (79), Expect = 0.11
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +1
Query: 259 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 438
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 737 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 796
Query: 439 LYEDKDGLRKEEISAL 486
L ++++ ++E I L
Sbjct: 797 LQKERED-KEETIDIL 811
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 33.9 bits (74), Expect = 0.42
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +1
Query: 277 EQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYI---EASIRLKE--- 438
E+Q +ER+R +E+LH++ G R+ + + RL+ +R E +RL+E
Sbjct: 1307 EEQPLLRQERDRKFRE--EELLHQEQG-RKFLEEEQRLREERERKFLKEEQQLRLEEREQ 1363
Query: 439 LYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRK 552
L +D+D +EE LS ++F +Q++ R+
Sbjct: 1364 LRQDRDRKFREEEQQLSRQERDRKFREEEQQVRRQERE 1401
>AL365436-3|CAI16590.1| 1203|Homo sapiens cingulin protein.
Length = 1203
Score = 31.5 bits (68), Expect = 2.3
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +1
Query: 256 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLK 435
L+ + L Q+R EERE+T+ L +K +I + ++++D+ + S+R+K
Sbjct: 1050 LESQNQLLQERLQAEEREKTVLQSTNRKLERKV-KELSIQIEDERQHVNDQKDQLSLRVK 1108
Query: 436 ELYEDKDGLRKEEISALSG 492
L D +EEI L G
Sbjct: 1109 ALKRQVDE-AEEEIERLDG 1126
>AF263462-1|AAF74498.1| 1203|Homo sapiens cingulin protein.
Length = 1203
Score = 31.5 bits (68), Expect = 2.3
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +1
Query: 256 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLK 435
L+ + L Q+R EERE+T+ L +K +I + ++++D+ + S+R+K
Sbjct: 1050 LESQNQLLQERLQAEEREKTVLQSTNRKLERKV-KELSIQIEDERQHVNDQKDQLSLRVK 1108
Query: 436 ELYEDKDGLRKEEISALSG 492
L D +EEI L G
Sbjct: 1109 ALKRQVDE-AEEEIERLDG 1126
>AB037740-1|BAA92557.1| 1208|Homo sapiens KIAA1319 protein protein.
Length = 1208
Score = 31.5 bits (68), Expect = 2.3
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +1
Query: 256 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLK 435
L+ + L Q+R EERE+T+ L +K +I + ++++D+ + S+R+K
Sbjct: 1055 LESQNQLLQERLQAEEREKTVLQSTNRKLERKV-KELSIQIEDERQHVNDQKDQLSLRVK 1113
Query: 436 ELYEDKDGLRKEEISALSG 492
L D +EEI L G
Sbjct: 1114 ALKRQVDE-AEEEIERLDG 1131
>DQ120669-1|ABB92450.1| 681|Homo sapiens rcCTAGE5 protein.
Length = 681
Score = 29.5 bits (63), Expect = 9.1
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 259 KMETILEQQRSYHEERERTMDAMVKEIL-HKKTGHRETINADHRLKNLHDRYIEASIRLK 435
++ET ++ + EE ERT+ ++I+ H+K H + A +NL+D E + +
Sbjct: 396 ELETYRQRAKDLEEELERTIHYYQRQIISHEKKAHHNWLAAWAAERNLNDLRKENAHNRQ 455
Query: 436 ELYE 447
+L E
Sbjct: 456 KLAE 459
>BC036527-1|AAH36527.1| 811|Homo sapiens CTAGEP protein protein.
Length = 811
Score = 29.5 bits (63), Expect = 9.1
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 259 KMETILEQQRSYHEERERTMDAMVKEIL-HKKTGHRETINADHRLKNLHDRYIEASIRLK 435
++ET ++ + EE ERT+ ++I+ H+K H + A +NL+D E + +
Sbjct: 425 ELETYRQRAKDLEEELERTIHYYQRQIISHEKKAHHNWLAAWAAERNLNDLRKENAHNRQ 484
Query: 436 ELYE 447
+L E
Sbjct: 485 KLAE 488
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,520,339
Number of Sequences: 237096
Number of extensions: 1218719
Number of successful extensions: 2944
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2944
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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