Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16d14
         (585 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66524-1|CAA91420.2|  500|Caenorhabditis elegans Hypothetical pr...   111   3e-25
AL023828-29|CAA19454.2|  483|Caenorhabditis elegans Hypothetical...    31   0.60 
Z98866-21|CAD56612.1|  743|Caenorhabditis elegans Hypothetical p...    31   0.80 
Z98866-20|CAB11567.1|  734|Caenorhabditis elegans Hypothetical p...    31   0.80 
AC006713-4|AAK68404.1|  321|Caenorhabditis elegans Hypothetical ...    31   0.80 
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos...    29   3.2  
Z70208-6|CAA94138.1|  183|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z48006-3|CAB62803.1|  449|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z48006-2|CAA88050.1|  495|Caenorhabditis elegans Hypothetical pr...    28   4.2  
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical...    28   5.6  
Z77664-1|CAB01216.2|  900|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U70858-5|AAB09179.2|  294|Caenorhabditis elegans Serpentine rece...    27   9.8  
AC024790-1|AAK84609.1|  315|Caenorhabditis elegans Hypothetical ...    27   9.8  

>Z66524-1|CAA91420.2|  500|Caenorhabditis elegans Hypothetical
           protein T13H5.4 protein.
          Length = 500

 Score =  111 bits (268), Expect = 3e-25
 Identities = 49/108 (45%), Positives = 76/108 (70%)
 Frame = +1

Query: 262 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 441
           M++ LE  R+ HEERER +D  VKE + +K  H+  +N++ R+K   DRY   S  L + 
Sbjct: 1   MDSCLETIRNLHEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKF 60

Query: 442 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 585
           Y+D+DG +  E+ ++SGP+EF EFYSRLK IK+ HR++P+E++ P++V
Sbjct: 61  YKDEDGSKSMEMDSVSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTV 108


>AL023828-29|CAA19454.2|  483|Caenorhabditis elegans Hypothetical
           protein Y17G7B.9 protein.
          Length = 483

 Score = 31.1 bits (67), Expect = 0.60
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
 Frame = +1

Query: 256 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRE--TINADHRLKNLHDRYIEASIR 429
           +K ET+ E  +SYH+ + R   +  K+++ +K   RE  T+N   R KN      + +I 
Sbjct: 340 VKDETLSEAMQSYHDLKMR-FKSKTKDVVKQKDAQREGQTMNMLERFKNRLGASNQKAIL 398

Query: 430 LKELYEDKDGLRKEE 474
             +  E K+ + + E
Sbjct: 399 FDKKIEIKEPILRNE 413


>Z98866-21|CAD56612.1|  743|Caenorhabditis elegans Hypothetical
           protein Y49E10.23b protein.
          Length = 743

 Score = 30.7 bits (66), Expect = 0.80
 Identities = 23/83 (27%), Positives = 40/83 (48%)
 Frame = +1

Query: 280 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDG 459
           Q +   ++ E+T+  +  EI  +K  H E  + ++R+K    R    S  L E  +  D 
Sbjct: 195 QSQENLDDLEKTVQNLKVEI--EKLKH-ERFDFENRMKIAEKRVESLSSNLSESKQQGDM 251

Query: 460 LRKEEISALSGPHEFQEFYSRLK 528
           LRK+ I A    H  Q++  +L+
Sbjct: 252 LRKQLIQAKDDKHIIQQYEVKLQ 274


>Z98866-20|CAB11567.1|  734|Caenorhabditis elegans Hypothetical
           protein Y49E10.23a protein.
          Length = 734

 Score = 30.7 bits (66), Expect = 0.80
 Identities = 23/83 (27%), Positives = 40/83 (48%)
 Frame = +1

Query: 280 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDG 459
           Q +   ++ E+T+  +  EI  +K  H E  + ++R+K    R    S  L E  +  D 
Sbjct: 195 QSQENLDDLEKTVQNLKVEI--EKLKH-ERFDFENRMKIAEKRVESLSSNLSESKQQGDM 251

Query: 460 LRKEEISALSGPHEFQEFYSRLK 528
           LRK+ I A    H  Q++  +L+
Sbjct: 252 LRKQLIQAKDDKHIIQQYEVKLQ 274


>AC006713-4|AAK68404.1|  321|Caenorhabditis elegans Hypothetical
           protein Y119D3A.1 protein.
          Length = 321

 Score = 30.7 bits (66), Expect = 0.80
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 376 ADHRLKNLHDRYIEASIRL-KELYEDKDGLRKEEISALSGPHEFQEFYSR 522
           A +    L+   +E S +L   LYED +    EE++  SG  EF++FY +
Sbjct: 109 AKNNATELYFSSLEKSNKLGASLYEDSENAGAEEMNISSGTIEFKDFYHK 158


>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
            protein 1 protein.
          Length = 1963

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +1

Query: 274  LEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDK 453
            +E  R   E+ E+   A  K +L K    +   N + RL  L D Y +  ++ K L E+K
Sbjct: 948  METVRDLEEQLEQEEQARQKLLLDKTNVDQRLRNLEERLVELQDAY-DKLLKEKRLLEEK 1006

Query: 454  -DGL 462
             +GL
Sbjct: 1007 VEGL 1010


>Z70208-6|CAA94138.1|  183|Caenorhabditis elegans Hypothetical
           protein F54B11.6 protein.
          Length = 183

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
 Frame = +1

Query: 292 YHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRL---KELYEDKDGL 462
           YH+ RE+++ A+ +++      H+E +    R++   D  ++  I L   KE  E K   
Sbjct: 48  YHDSREKSLVALTEKL------HQEFMEDQERVR--RDLLVQFKIELDQTKEELEKKHAE 99

Query: 463 R-KEEISALSGPHEFQEFYSRLKQ 531
             KEEI  LS  H+ +   ++ KQ
Sbjct: 100 NLKEEIEKLSEKHQRELAVAKKKQ 123


>Z48006-3|CAB62803.1|  449|Caenorhabditis elegans Hypothetical
           protein F19C6.2b protein.
          Length = 449

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
 Frame = +1

Query: 301 ERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEIS 480
           ER   +   ++E +  KT  R+    + RL N HDR     + +  +  D D      ++
Sbjct: 146 ERPDILSLAIREFV--KTDERKIKELEKRLANEHDR-----VMIHTIINDTDWKEVTAVA 198

Query: 481 ALSGPHEF--QEFYSRLKQIKEFHRKHPNEISVPMS 582
            +  P +         L    E H   PN + VP+S
Sbjct: 199 DIESPTDIVSHRVSLALLAFDEKHSSIPNGVDVPVS 234


>Z48006-2|CAA88050.1|  495|Caenorhabditis elegans Hypothetical
           protein F19C6.2a protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
 Frame = +1

Query: 301 ERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEIS 480
           ER   +   ++E +  KT  R+    + RL N HDR     + +  +  D D      ++
Sbjct: 192 ERPDILSLAIREFV--KTDERKIKELEKRLANEHDR-----VMIHTIINDTDWKEVTAVA 244

Query: 481 ALSGPHEF--QEFYSRLKQIKEFHRKHPNEISVPMS 582
            +  P +         L    E H   PN + VP+S
Sbjct: 245 DIESPTDIVSHRVSLALLAFDEKHSSIPNGVDVPVS 280


>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
           protein Y26D4A.9 protein.
          Length = 1435

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
 Frame = +1

Query: 259 KMETILEQQRS--YHEERERTMDAM--VKEILHKKTGHRETIN----ADHRLKNLHDRYI 414
           K++T LEQ++   Y    E+  +A   VK ++  ++ + + +N    A+  L  + ++Y 
Sbjct: 657 KVKTELEQEKGIDYQSILEKIKEAREEVKNVI--RSDYTDCLNKVRKAEDTLAKIENKYK 714

Query: 415 EASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEI 567
           + S  +K+  ++KD + K +        EFQ+     ++  E  +K   E+
Sbjct: 715 KESEEVKKTGKNKDKVEKTKEEVEKAKEEFQKVKEEFQKEVEKVKKVEKEL 765


>Z77664-1|CAB01216.2|  900|Caenorhabditis elegans Hypothetical
           protein F53H10.2 protein.
          Length = 900

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 241 QFL*PLKMETILEQQRSYHEERERTMDAMVKEILHKKTGH 360
           + L P+KMET    Q+        T  +++K+ LHKK+ H
Sbjct: 237 EMLSPIKMETTDPSQQIASPSFLMTSTSLLKQHLHKKSHH 276


>Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical
           protein F33H2.5 protein.
          Length = 2144

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 139 IFCMLPYIFSHNLNFKIINH 198
           I+C++P  F  N+ FK+ NH
Sbjct: 844 IWCLIPASFPENVTFKLKNH 863


>U70858-5|AAB09179.2|  294|Caenorhabditis elegans Serpentine
           receptor, class x protein34 protein.
          Length = 294

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +1

Query: 160 IFSHNLNFKIINHYFNIIVFYKVIDIKQFL*PLKMETILEQQRSY 294
           I   N+   I+N   ++I   KVI +KQF    ++      Q SY
Sbjct: 171 ILGKNIILSIVNVILHVITMIKVITLKQFKARTQVSRSYSLQESY 215


>AC024790-1|AAK84609.1|  315|Caenorhabditis elegans Hypothetical
           protein Y47D7A.3 protein.
          Length = 315

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 388 LKNLHDRYIEASIRLKELYEDKDGLRKEEISAL 486
           L N  DRYI+  I +    E +  LR  EIS +
Sbjct: 220 LSNARDRYIQCMINVSSCSEVQSALRLAEISLI 252


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,872,090
Number of Sequences: 27780
Number of extensions: 223074
Number of successful extensions: 719
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)