Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16d08
(389 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC023588-1|AAH23588.1| 164|Homo sapiens ribonuclease H2, subuni... 37 0.020
AK024627-1|BAB14937.1| 163|Homo sapiens protein ( Homo sapiens ... 37 0.020
AF346606-1|AAO49177.1| 164|Homo sapiens AYP1 protein. 37 0.020
AF346605-1|AAO49176.1| 164|Homo sapiens AYP1 protein. 37 0.020
AF312034-1|AAL87739.1| 164|Homo sapiens RNase H1 small subunit ... 37 0.020
X83864-1|CAA58744.1| 378|Homo sapiens G-protein coupled recepto... 31 1.3
BC069579-1|AAH69579.1| 378|Homo sapiens endothelial differentia... 31 1.3
BC060827-1|AAH60827.1| 378|Homo sapiens endothelial differentia... 31 1.3
AY322540-1|AAP84353.1| 378|Homo sapiens endothelial differentia... 31 1.3
AL772202-5|CAI16743.1| 378|Homo sapiens endothelial differentia... 31 1.3
AF022139-1|AAC51906.1| 378|Homo sapiens lysosphingolipid recept... 31 1.3
DQ926256-1|ABK81475.1| 138|Homo sapiens immunoglobulin heavy ch... 29 7.1
BC018757-1|AAH18757.1| 406|Homo sapiens chromosome 1 open readi... 29 7.1
BC011575-1|AAH11575.1| 415|Homo sapiens C1orf85 protein protein. 29 7.1
AY358450-1|AAQ88815.1| 406|Homo sapiens RGSV2553 protein. 29 7.1
AL589685-7|CAI14165.1| 183|Homo sapiens chromosome 1 open readi... 29 7.1
AL589685-6|CAI14164.1| 406|Homo sapiens chromosome 1 open readi... 29 7.1
AK075349-1|BAC11561.1| 406|Homo sapiens protein ( Homo sapiens ... 29 7.1
AF062220-1|AAC18256.1| 140|Homo sapiens immunoglobulin heavy ch... 29 7.1
Y08259-1|CAA69587.1| 125|Homo sapiens IgM variable region protein. 28 9.3
BC036340-1|AAH36340.1| 392|Homo sapiens C1orf85 protein protein. 28 9.3
AF103203-1|AAD30763.1| 106|Homo sapiens immunoglobulin heavy ch... 28 9.3
>BC023588-1|AAH23588.1| 164|Homo sapiens ribonuclease H2, subunit C
protein.
Length = 164
Score = 37.1 bits (82), Expect = 0.020
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 21/100 (21%)
Frame = +2
Query: 83 LSATFRGHPLDGTQITFPEGYRA-VLVTETKR--------------------PLTEDAER 199
L +FRG L G ++ P G V+VTE K+ PL D +R
Sbjct: 59 LEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKKVSMGKPDPLRDSGTDDQEEEPLERDFDR 118
Query: 200 KFQVTGGFKNFTYWNWDKKPSKNDDLCKAMDWIEIAEAIH 319
T F FT W + P + + A+ W +A AIH
Sbjct: 119 FIGATANFSRFTLWGLETIPGPDAKVRGALTWPSLAAAIH 158
>AK024627-1|BAB14937.1| 163|Homo sapiens protein ( Homo sapiens
cDNA: FLJ20974 fis, clone ADSU01596. ).
Length = 163
Score = 37.1 bits (82), Expect = 0.020
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 20/99 (20%)
Frame = +2
Query: 83 LSATFRGHPLDGTQITFPEGYRA-VLVTETK-------------------RPLTEDAERK 202
L +FRG L G ++ P G V+VTE K PL D +R
Sbjct: 59 LEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKVSMGKPDPLRDSGTDDQEEEPLERDFDRF 118
Query: 203 FQVTGGFKNFTYWNWDKKPSKNDDLCKAMDWIEIAEAIH 319
T F FT W + P + + A+ W +A AIH
Sbjct: 119 IGATANFSRFTLWGLETIPGPDAKVRGALTWPSLAAAIH 157
>AF346606-1|AAO49177.1| 164|Homo sapiens AYP1 protein.
Length = 164
Score = 37.1 bits (82), Expect = 0.020
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 21/100 (21%)
Frame = +2
Query: 83 LSATFRGHPLDGTQITFPEGYRA-VLVTETKR--------------------PLTEDAER 199
L +FRG L G ++ P G V+VTE K+ PL D +R
Sbjct: 59 LEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKKVSMGKPDPLRDSGTDDQEEEPLERDFDR 118
Query: 200 KFQVTGGFKNFTYWNWDKKPSKNDDLCKAMDWIEIAEAIH 319
T F FT W + P + + A+ W +A AIH
Sbjct: 119 FIGATANFSRFTLWGLETIPGPDAKVRGALTWPSLAAAIH 158
>AF346605-1|AAO49176.1| 164|Homo sapiens AYP1 protein.
Length = 164
Score = 37.1 bits (82), Expect = 0.020
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 21/100 (21%)
Frame = +2
Query: 83 LSATFRGHPLDGTQITFPEGYRA-VLVTETKR--------------------PLTEDAER 199
L +FRG L G ++ P G V+VTE K+ PL D +R
Sbjct: 59 LEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKKVSMGKPDPLRDSGTDDQEEEPLERDFDR 118
Query: 200 KFQVTGGFKNFTYWNWDKKPSKNDDLCKAMDWIEIAEAIH 319
T F FT W + P + + A+ W +A AIH
Sbjct: 119 FIGATANFSRFTLWGLETIPGPDAKVRGALTWPSLAAAIH 158
>AF312034-1|AAL87739.1| 164|Homo sapiens RNase H1 small subunit
protein.
Length = 164
Score = 37.1 bits (82), Expect = 0.020
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 21/100 (21%)
Frame = +2
Query: 83 LSATFRGHPLDGTQITFPEGYRA-VLVTETKR--------------------PLTEDAER 199
L +FRG L G ++ P G V+VTE K+ PL D +R
Sbjct: 59 LEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKKVSMGKPDPLRDSGTDDQEEEPLERDFDR 118
Query: 200 KFQVTGGFKNFTYWNWDKKPSKNDDLCKAMDWIEIAEAIH 319
T F FT W + P + + A+ W +A AIH
Sbjct: 119 FIGATANFSRFTLWGLETIPGPDAKVRGALTWPSLAAAIH 158
>X83864-1|CAA58744.1| 378|Homo sapiens G-protein coupled receptor
(putative) protein.
Length = 378
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 216 GASRTSRIGIGIRNHRRTMIYVKPWTGSRLRKRYMAIDECSFIAF 350
GAS S + I I H TMI ++P+ ++ + ++ I C IAF
Sbjct: 123 GASTCSLLAIAIERHL-TMIKMRPYDANKRHRVFLLIGMCWLIAF 166
>BC069579-1|AAH69579.1| 378|Homo sapiens endothelial
differentiation, sphingolipid G-protein-coupled
receptor, 3 protein.
Length = 378
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 216 GASRTSRIGIGIRNHRRTMIYVKPWTGSRLRKRYMAIDECSFIAF 350
GAS S + I I H TMI ++P+ ++ + ++ I C IAF
Sbjct: 123 GASTCSLLAIAIERHL-TMIKMRPYDANKRHRVFLLIGMCWLIAF 166
>BC060827-1|AAH60827.1| 378|Homo sapiens endothelial
differentiation, sphingolipid G-protein-coupled
receptor, 3 protein.
Length = 378
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 216 GASRTSRIGIGIRNHRRTMIYVKPWTGSRLRKRYMAIDECSFIAF 350
GAS S + I I H TMI ++P+ ++ + ++ I C IAF
Sbjct: 123 GASTCSLLAIAIERHL-TMIKMRPYDANKRHRVFLLIGMCWLIAF 166
>AY322540-1|AAP84353.1| 378|Homo sapiens endothelial
differentiation sphingolipid G-protein-coupled receptor
3 protein.
Length = 378
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 216 GASRTSRIGIGIRNHRRTMIYVKPWTGSRLRKRYMAIDECSFIAF 350
GAS S + I I H TMI ++P+ ++ + ++ I C IAF
Sbjct: 123 GASTCSLLAIAIERHL-TMIKMRPYDANKRHRVFLLIGMCWLIAF 166
>AL772202-5|CAI16743.1| 378|Homo sapiens endothelial
differentiation, sphingolipid G-protein-coupled
receptor, 3 protein.
Length = 378
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 216 GASRTSRIGIGIRNHRRTMIYVKPWTGSRLRKRYMAIDECSFIAF 350
GAS S + I I H TMI ++P+ ++ + ++ I C IAF
Sbjct: 123 GASTCSLLAIAIERHL-TMIKMRPYDANKRHRVFLLIGMCWLIAF 166
>AF022139-1|AAC51906.1| 378|Homo sapiens lysosphingolipid receptor
protein.
Length = 378
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 216 GASRTSRIGIGIRNHRRTMIYVKPWTGSRLRKRYMAIDECSFIAF 350
GAS S + I I H TMI ++P+ ++ + ++ I C IAF
Sbjct: 123 GASTCSLLAIAIERHL-TMIKMRPYDANKRHRVFLLIGMCWLIAF 166
>DQ926256-1|ABK81475.1| 138|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 138
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 182 TEDAERKFQVTGGFKNFTYWNWDKKPSKNDDLCKAMDWI 298
+ED V+GGF + YW+W ++P K ++WI
Sbjct: 15 SEDLSLTCTVSGGFISSYYWSWIRQPPG-----KGLEWI 48
>BC018757-1|AAH18757.1| 406|Homo sapiens chromosome 1 open reading
frame 85 protein.
Length = 406
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 83 LSATFRGHPLDGTQITFPEG---YRAVLVTETKRP 178
LSATF+GHP++ TF G +R + + RP
Sbjct: 169 LSATFQGHPMNDPTRTFANGSLAFRVQAFSRSSRP 203
>BC011575-1|AAH11575.1| 415|Homo sapiens C1orf85 protein protein.
Length = 415
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 83 LSATFRGHPLDGTQITFPEG---YRAVLVTETKRP 178
LSATF+GHP++ TF G +R + + RP
Sbjct: 178 LSATFQGHPMNDPTRTFANGSLAFRVQAFSRSSRP 212
>AY358450-1|AAQ88815.1| 406|Homo sapiens RGSV2553 protein.
Length = 406
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 83 LSATFRGHPLDGTQITFPEG---YRAVLVTETKRP 178
LSATF+GHP++ TF G +R + + RP
Sbjct: 169 LSATFQGHPMNDPTRTFANGSLAFRVQAFSRSSRP 203
>AL589685-7|CAI14165.1| 183|Homo sapiens chromosome 1 open reading
frame 85 protein.
Length = 183
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 83 LSATFRGHPLDGTQITFPEG---YRAVLVTETKRP 178
LSATF+GHP++ TF G +R + + RP
Sbjct: 83 LSATFQGHPMNDPTRTFANGSLAFRVQAFSRSSRP 117
>AL589685-6|CAI14164.1| 406|Homo sapiens chromosome 1 open reading
frame 85 protein.
Length = 406
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 83 LSATFRGHPLDGTQITFPEG---YRAVLVTETKRP 178
LSATF+GHP++ TF G +R + + RP
Sbjct: 169 LSATFQGHPMNDPTRTFANGSLAFRVQAFSRSSRP 203
>AK075349-1|BAC11561.1| 406|Homo sapiens protein ( Homo sapiens
cDNA PSEC0030 fis, clone NT2RP1000567, highly similar to
Kidney predominant protein NCU-G1. ).
Length = 406
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 83 LSATFRGHPLDGTQITFPEG---YRAVLVTETKRP 178
LSATF+GHP++ TF G +R + + RP
Sbjct: 169 LSATFQGHPMNDPTRTFANGSLAFRVQAFSRSSRP 203
>AF062220-1|AAC18256.1| 140|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 140
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 209 VTGGFKNFTYWNWDKKPSKNDDLCKAMDWI 298
V+GGF + YW+W ++P+ K +DWI
Sbjct: 43 VSGGFISGYYWSWIRQPAG-----KGLDWI 67
>Y08259-1|CAA69587.1| 125|Homo sapiens IgM variable region protein.
Length = 125
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 209 VTGGFKNFTYWNWDKKPSKNDDLCKAMDWI 298
V+GG N YWNW ++P K ++WI
Sbjct: 24 VSGGSMNSFYWNWVRQPPG-----KGLEWI 48
>BC036340-1|AAH36340.1| 392|Homo sapiens C1orf85 protein protein.
Length = 392
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 83 LSATFRGHPLDGTQITFPEGYRAVLVTETKR 175
LSATF+GHP++ TF G A V R
Sbjct: 155 LSATFQGHPMNDPTRTFANGSLAFRVQAFSR 185
>AF103203-1|AAD30763.1| 106|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 106
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 209 VTGGFKNFTYWNWDKKPSKNDDLCKAMDWI 298
V+GG N YWNW ++P+ K ++WI
Sbjct: 2 VSGGSINTYYWNWIRQPAG-----KGLEWI 26
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,481,553
Number of Sequences: 237096
Number of extensions: 902007
Number of successful extensions: 2227
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2227
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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