Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16d08
         (389 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001550-1|AAN71305.1|  165|Drosophila melanogaster RE11282p pro...    77   6e-15
AE013599-2519|AAM68481.1|  155|Drosophila melanogaster CG30105-P...    77   6e-15
AY118572-1|AAM49941.1|  683|Drosophila melanogaster LD42771p pro...    27   6.6  
AF015270-1|AAL71891.1|  720|Drosophila melanogaster GMP syntheta...    27   6.6  
AE014298-3144|AAF50812.2|   94|Drosophila melanogaster CG14583-P...    27   8.7  

>BT001550-1|AAN71305.1|  165|Drosophila melanogaster RE11282p
           protein.
          Length = 165

 Score = 77.4 bits (182), Expect = 6e-15
 Identities = 31/78 (39%), Positives = 55/78 (70%)
 Frame = +2

Query: 83  LSATFRGHPLDGTQITFPEGYRAVLVTETKRPLTEDAERKFQVTGGFKNFTYWNWDKKPS 262
           L+   RG PL G ++  PEGY  +++ ET++P+++ ++RK ++TG F++FTYWN+DK PS
Sbjct: 64  LTNALRGFPLMGEKLKVPEGYCGLVLQETEKPISDTSDRKLRLTGVFQDFTYWNYDKVPS 123

Query: 263 KNDDLCKAMDWIEIAEAI 316
             D   +A+   ++A+A+
Sbjct: 124 NGDPYRQALPLPDVAQAL 141


>AE013599-2519|AAM68481.1|  155|Drosophila melanogaster CG30105-PA
           protein.
          Length = 155

 Score = 77.4 bits (182), Expect = 6e-15
 Identities = 31/78 (39%), Positives = 55/78 (70%)
 Frame = +2

Query: 83  LSATFRGHPLDGTQITFPEGYRAVLVTETKRPLTEDAERKFQVTGGFKNFTYWNWDKKPS 262
           L+   RG PL G ++  PEGY  +++ ET++P+++ ++RK ++TG F++FTYWN+DK PS
Sbjct: 54  LTNALRGFPLMGEKLKVPEGYCGLVLQETEKPISDTSDRKLRLTGVFQDFTYWNYDKVPS 113

Query: 263 KNDDLCKAMDWIEIAEAI 316
             D   +A+   ++A+A+
Sbjct: 114 NGDPYRQALPLPDVAQAL 131


>AY118572-1|AAM49941.1|  683|Drosophila melanogaster LD42771p
           protein.
          Length = 683

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = +1

Query: 1   E*YLNEDYKEKLICILSILFLKNKLKKT---IGNVSGASS 111
           E Y+ +DY E  + I  I+  KNKL+K    I  V+ A+S
Sbjct: 441 EAYMEKDYSETQVIIRVIVDYKNKLQKNHALINRVTAATS 480


>AF015270-1|AAL71891.1|  720|Drosophila melanogaster GMP synthetase
           protein.
          Length = 720

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = +1

Query: 1   E*YLNEDYKEKLICILSILFLKNKLKKT---IGNVSGASS 111
           E Y+ +DY E  + I  I+  KNKL+K    I  V+ A+S
Sbjct: 441 EAYMEKDYSETQVIIRVIVDYKNKLQKNHALINRVTAATS 480


>AE014298-3144|AAF50812.2|   94|Drosophila melanogaster CG14583-PA
           protein.
          Length = 94

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 192 ASSVKGLFVSVTKTAR*PSGNVICVPSRGCPRNVA 88
           A SV+G  ++++K  R   G  +C+ S G P  V+
Sbjct: 45  AQSVEGEMLTLSKITRSEMGAYMCIASNGVPPTVS 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,742,839
Number of Sequences: 53049
Number of extensions: 277408
Number of successful extensions: 748
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1086986940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)