Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16d06
(328 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF288812-1|AAG10199.1| 566|Caenorhabditis elegans synembryn pro... 31 0.26
AC084158-34|AAK68564.1| 566|Caenorhabditis elegans Resistance t... 31 0.26
Z68333-1|CAA92725.1| 405|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical pr... 27 3.2
AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical ... 27 3.2
AF106583-12|AAD03133.1| 432|Caenorhabditis elegans Hypothetical... 27 3.2
AF016677-2|AAB66146.1| 292|Caenorhabditis elegans Hypothetical ... 27 4.2
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 26 5.6
U28993-3|AAT81196.1| 635|Caenorhabditis elegans Hypothetical pr... 26 5.6
U28993-2|AAK31497.1| 720|Caenorhabditis elegans Hypothetical pr... 26 5.6
AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical... 26 7.4
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical... 26 7.4
Z68298-7|CAA92604.1| 447|Caenorhabditis elegans Hypothetical pr... 25 9.7
>AF288812-1|AAG10199.1| 566|Caenorhabditis elegans synembryn
protein.
Length = 566
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -1
Query: 220 FCHFTADVKGI-HRNTSRTLEINR 152
FCHF DVK I H+N ++T +I R
Sbjct: 236 FCHFHGDVKAIDHKNAAKTCQILR 259
>AC084158-34|AAK68564.1| 566|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 8, isoform a
protein.
Length = 566
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -1
Query: 220 FCHFTADVKGI-HRNTSRTLEINR 152
FCHF DVK I H+N ++T +I R
Sbjct: 236 FCHFHGDVKAIDHKNAAKTCQILR 259
>Z68333-1|CAA92725.1| 405|Caenorhabditis elegans Hypothetical
protein C05C12.1 protein.
Length = 405
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 277 KREKKNHKNLGNTAKYTSPFCHFTADV 197
+ EKK +L T KYTSP H AD+
Sbjct: 197 RTEKKKVHSLVGTPKYTSPKAHAMADL 223
>Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical
protein ZC247.1 protein.
Length = 4404
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 295 IPPKTNKREKKNHKNLGNTAKYTSPF--CHFTAD 200
IPPKT + E+ H+ L +T +TS +TAD
Sbjct: 212 IPPKTYQTERIEHEVLESTRDFTSEMTESQYTAD 245
>Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical
protein ZC247.1 protein.
Length = 4404
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 295 IPPKTNKREKKNHKNLGNTAKYTSPF--CHFTAD 200
IPPKT + E+ H+ L +T +TS +TAD
Sbjct: 212 IPPKTYQTERIEHEVLESTRDFTSEMTESQYTAD 245
>AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical
protein ZC247.1 protein.
Length = 4404
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 295 IPPKTNKREKKNHKNLGNTAKYTSPF--CHFTAD 200
IPPKT + E+ H+ L +T +TS +TAD
Sbjct: 212 IPPKTYQTERIEHEVLESTRDFTSEMTESQYTAD 245
>AF106583-12|AAD03133.1| 432|Caenorhabditis elegans Hypothetical
protein F23C8.11 protein.
Length = 432
Score = 27.1 bits (57), Expect = 3.2
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 80 TRQMSNLKXYEHQLITRPHVPCPL 9
+R M+NL+ Y + + T+ PCP+
Sbjct: 371 SRAMANLRTYHYDVTTKKIEPCPM 394
>AF016677-2|AAB66146.1| 292|Caenorhabditis elegans Hypothetical
protein ZK1240.5 protein.
Length = 292
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Frame = -1
Query: 256 KNLGNTAKYTSPFCHFTAD-----VKGIHRNTSRTLEINRKYTD 140
KNL N + PFC + +K +H+N S I K TD
Sbjct: 34 KNLLNNGRIVCPFCREPTEIPGNTIKSLHKNFSLIQMIQTKTTD 77
>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
protein C05C10.2b protein.
Length = 1553
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 244 NTAKYTSPFCHFTADVKGIHRNTSRTLEIN 155
N +KY CH +V G HR R LEIN
Sbjct: 587 NKSKYILIACHM--NVHGYHRGDLRFLEIN 614
>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
protein C05C10.2a protein.
Length = 1551
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 244 NTAKYTSPFCHFTADVKGIHRNTSRTLEIN 155
N +KY CH +V G HR R LEIN
Sbjct: 587 NKSKYILIACHM--NVHGYHRGDLRFLEIN 614
>U28993-3|AAT81196.1| 635|Caenorhabditis elegans Hypothetical
protein F22D3.2b protein.
Length = 635
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 328 VTTLVVF-GSCGIPPKTNKREKKNHKNLGNTAKYT 227
+ L+ F G C + KTN + ++ + GN K+T
Sbjct: 53 IVPLIKFDGECVVKEKTNTEDGTSYPHYGNCTKFT 87
>U28993-2|AAK31497.1| 720|Caenorhabditis elegans Hypothetical
protein F22D3.2a protein.
Length = 720
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 328 VTTLVVF-GSCGIPPKTNKREKKNHKNLGNTAKYT 227
+ L+ F G C + KTN + ++ + GN K+T
Sbjct: 53 IVPLIKFDGECVVKEKTNTEDGTSYPHYGNCTKFT 87
>AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical
protein W02D3.10b protein.
Length = 946
Score = 25.8 bits (54), Expect = 7.4
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -3
Query: 299 WDTSENEQKRKEKPQKLRQH 240
W+ SE+E+K K + +K+ +H
Sbjct: 313 WEISEDEEKEKMEQRKISEH 332
>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
protein W02D3.10a protein.
Length = 1437
Score = 25.8 bits (54), Expect = 7.4
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -3
Query: 299 WDTSENEQKRKEKPQKLRQH 240
W+ SE+E+K K + +K+ +H
Sbjct: 313 WEISEDEEKEKMEQRKISEH 332
>Z68298-7|CAA92604.1| 447|Caenorhabditis elegans Hypothetical
protein F44D12.8 protein.
Length = 447
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 292 PPKTNKREKKNHKNLGNTAKYTS 224
PPKT R+KKN N +A+ T+
Sbjct: 104 PPKTTVRKKKNQVNQSLSAENTN 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,738,173
Number of Sequences: 27780
Number of extensions: 86484
Number of successful extensions: 366
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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