Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16c18
(618 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC054031-1|AAH54031.1| 130|Homo sapiens mitochondrial ribosomal... 91 3e-18
BC047445-1|AAH47445.2| 130|Homo sapiens mitochondrial ribosomal... 91 3e-18
BC037405-1|AAH37405.1| 142|Homo sapiens MRPS17 protein protein. 91 3e-18
AB049950-1|BAB41003.1| 130|Homo sapiens mitochondrial ribosomal... 91 3e-18
AC004973-1|AAC62432.1| 391|Homo sapiens WUGSC:H_DJ1139I01.1 pro... 90 7e-18
BC146758-1|AAI46759.1| 1266|Homo sapiens TBC1 domain family, mem... 33 1.1
AK127020-1|BAC86789.1| 1015|Homo sapiens protein ( Homo sapiens ... 33 1.1
AB020689-1|BAA74905.2| 1291|Homo sapiens KIAA0882 protein protein. 33 1.1
AL138742-2|CAO03537.1| 1403|Homo sapiens KIAA1009 protein. 31 3.3
AL138742-1|CAI22698.2| 1327|Homo sapiens KIAA1009 protein. 31 3.3
AB023226-1|BAA76853.2| 1345|Homo sapiens KIAA1009 protein protein. 31 3.3
BC041560-1|AAH41560.1| 859|Homo sapiens ABCC4 protein protein. 31 4.3
AY207008-1|AAO37649.1| 1325|Homo sapiens ATP-binding cassette tr... 31 4.3
AY081219-1|AAL88745.1| 1325|Homo sapiens multidrug resistance-as... 31 4.3
AL356257-1|CAI16722.1| 1325|Homo sapiens ATP-binding cassette, s... 31 4.3
AL157818-1|CAC36037.2| 1325|Homo sapiens ATP-binding cassette, s... 31 4.3
AL139381-1|CAI16589.1| 1325|Homo sapiens ATP-binding cassette, s... 31 4.3
AF541977-1|AAN17334.1| 1278|Homo sapiens ATP-binding cassette pr... 31 4.3
AF071203-1|AAC27077.1| 893|Homo sapiens ABC transporter MOAT-B ... 31 4.3
AF071202-1|AAC27076.1| 1325|Homo sapiens ABC transporter MOAT-B ... 31 4.3
AB208973-1|BAD92210.1| 776|Homo sapiens ABCC4 protein variant p... 31 4.3
>BC054031-1|AAH54031.1| 130|Homo sapiens mitochondrial ribosomal
protein S17 protein.
Length = 130
Score = 91.1 bits (216), Expect = 3e-18
Identities = 42/95 (44%), Positives = 59/95 (62%)
Frame = +1
Query: 139 LLGQCVPTVKQNAAKIRVKRLELDENLLMYFRKEEFYYCHDSEKICKTGDIVLIQALPEK 318
++G+ + T Q AK+RV RL LD LL YF K + Y+ HD+ + C GDIVL++ALP
Sbjct: 13 IVGKVIGTKMQKTAKVRVTRLVLDPYLLKYFNKRKTYFAHDALQQCTVGDIVLLRALPVP 72
Query: 319 LTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKE 423
K + HE+ E+V+ G + DPVTGK + Y E
Sbjct: 73 RAKHVKHELAEIVFKVGKVIDPVTGKPCAGTTYLE 107
>BC047445-1|AAH47445.2| 130|Homo sapiens mitochondrial ribosomal
protein S17 protein.
Length = 130
Score = 91.1 bits (216), Expect = 3e-18
Identities = 42/95 (44%), Positives = 59/95 (62%)
Frame = +1
Query: 139 LLGQCVPTVKQNAAKIRVKRLELDENLLMYFRKEEFYYCHDSEKICKTGDIVLIQALPEK 318
++G+ + T Q AK+RV RL LD LL YF K + Y+ HD+ + C GDIVL++ALP
Sbjct: 13 IVGKVIGTKMQKTAKVRVTRLVLDPYLLKYFNKRKTYFAHDALQQCTVGDIVLLRALPVP 72
Query: 319 LTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKE 423
K + HE+ E+V+ G + DPVTGK + Y E
Sbjct: 73 RAKHVKHELAEIVFKVGKVIDPVTGKPCAGTTYLE 107
>BC037405-1|AAH37405.1| 142|Homo sapiens MRPS17 protein protein.
Length = 142
Score = 91.1 bits (216), Expect = 3e-18
Identities = 42/95 (44%), Positives = 59/95 (62%)
Frame = +1
Query: 139 LLGQCVPTVKQNAAKIRVKRLELDENLLMYFRKEEFYYCHDSEKICKTGDIVLIQALPEK 318
++G+ + T Q AK+RV RL LD LL YF K + Y+ HD+ + C GDIVL++ALP
Sbjct: 25 IVGKVIGTKMQKTAKVRVTRLVLDPYLLKYFNKRKTYFAHDALQQCTVGDIVLLRALPVP 84
Query: 319 LTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKE 423
K + HE+ E+V+ G + DPVTGK + Y E
Sbjct: 85 RAKHVKHELAEIVFKVGKVIDPVTGKPCAGTTYLE 119
>AB049950-1|BAB41003.1| 130|Homo sapiens mitochondrial ribosomal
protein S17 protein.
Length = 130
Score = 91.1 bits (216), Expect = 3e-18
Identities = 42/95 (44%), Positives = 59/95 (62%)
Frame = +1
Query: 139 LLGQCVPTVKQNAAKIRVKRLELDENLLMYFRKEEFYYCHDSEKICKTGDIVLIQALPEK 318
++G+ + T Q AK+RV RL LD LL YF K + Y+ HD+ + C GDIVL++ALP
Sbjct: 13 IVGKVIGTKMQKTAKVRVTRLVLDPYLLKYFNKRKTYFAHDALQQCTVGDIVLLRALPVP 72
Query: 319 LTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKE 423
K + HE+ E+V+ G + DPVTGK + Y E
Sbjct: 73 RAKHVKHELAEIVFKVGKVIDPVTGKPCAGTTYLE 107
>AC004973-1|AAC62432.1| 391|Homo sapiens WUGSC:H_DJ1139I01.1
protein.
Length = 391
Score = 89.8 bits (213), Expect = 7e-18
Identities = 41/95 (43%), Positives = 61/95 (64%)
Frame = +1
Query: 139 LLGQCVPTVKQNAAKIRVKRLELDENLLMYFRKEEFYYCHDSEKICKTGDIVLIQALPEK 318
++G+ T Q AK+RV RL LD +LL Y+ K++ Y+ H++ + C GDIVL++ALP
Sbjct: 13 IMGKVTGTKMQKTAKVRVIRLVLDPHLLKYYNKQKTYFAHNALQQCTIGDIVLLKALPVP 72
Query: 319 LTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKE 423
TK + HE+ E+V+ G + DPVTGK + Y E
Sbjct: 73 RTKHVKHELAEIVFKVGKLVDPVTGKPCAGTTYLE 107
>BC146758-1|AAI46759.1| 1266|Homo sapiens TBC1 domain family, member
9 (with GRAM domain) protein.
Length = 1266
Score = 32.7 bits (71), Expect = 1.1
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Frame = +1
Query: 94 QEMSRNVADAARKFLLLGQCVPTVKQNAAKIRVKRL--ELDENLLMYFRKEEFYYCHDSE 267
Q + + AD R+F L G VPT Q + +R E + L F KE+ + H +E
Sbjct: 436 QRSTSSDADGERQFNLNGNSVPTATQTLMTMYRRRSPEEFNPKLAKEFLKEQAWKIHFAE 495
Query: 268 ---KIC-----KTGDIVLIQALPE----KLTKLITHEIKE-VVYP--FGDITDPVTGK-K 399
IC KT ++VL + +PE +L L++ I E +P + D+ + GK
Sbjct: 496 YGQGICMYRTEKTRELVL-KGIPESMRGELWLLLSGAINEKATHPGYYEDLVEKSMGKYN 554
Query: 400 VSKEQYKEDIER 435
++ E+ + D+ R
Sbjct: 555 LATEEIERDLHR 566
>AK127020-1|BAC86789.1| 1015|Homo sapiens protein ( Homo sapiens
cDNA FLJ45076 fis, clone BRAWH3027574, weakly similar
to Homo sapiens vascular Rab-GAP/TBC-containing (VRP).
).
Length = 1015
Score = 32.7 bits (71), Expect = 1.1
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Frame = +1
Query: 94 QEMSRNVADAARKFLLLGQCVPTVKQNAAKIRVKRL--ELDENLLMYFRKEEFYYCHDSE 267
Q + + AD R+F L G VPT Q + +R E + L F KE+ + H +E
Sbjct: 283 QRSTSSDADGERQFNLNGNSVPTATQTLMTMYRRRSPEEFNPKLAKEFLKEQAWKIHFAE 342
Query: 268 ---KIC-----KTGDIVLIQALPE----KLTKLITHEIKE-VVYP--FGDITDPVTGK-K 399
IC KT ++VL + +PE +L L++ I E +P + D+ + GK
Sbjct: 343 YGQGICMYRTEKTRELVL-KGIPESMRGELWLLLSGAINEKATHPGYYEDLVEKSMGKYN 401
Query: 400 VSKEQYKEDIER 435
++ E+ + D+ R
Sbjct: 402 LATEEIERDLHR 413
>AB020689-1|BAA74905.2| 1291|Homo sapiens KIAA0882 protein protein.
Length = 1291
Score = 32.7 bits (71), Expect = 1.1
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Frame = +1
Query: 94 QEMSRNVADAARKFLLLGQCVPTVKQNAAKIRVKRL--ELDENLLMYFRKEEFYYCHDSE 267
Q + + AD R+F L G VPT Q + +R E + L F KE+ + H +E
Sbjct: 461 QRSTSSDADGERQFNLNGNSVPTATQTLMTMYRRRSPEEFNPKLAKEFLKEQAWKIHFAE 520
Query: 268 ---KIC-----KTGDIVLIQALPE----KLTKLITHEIKE-VVYP--FGDITDPVTGK-K 399
IC KT ++VL + +PE +L L++ I E +P + D+ + GK
Sbjct: 521 YGQGICMYRTEKTRELVL-KGIPESMRGELWLLLSGAINEKATHPGYYEDLVEKSMGKYN 579
Query: 400 VSKEQYKEDIER 435
++ E+ + D+ R
Sbjct: 580 LATEEIERDLHR 591
>AL138742-2|CAO03537.1| 1403|Homo sapiens KIAA1009 protein.
Length = 1403
Score = 31.1 bits (67), Expect = 3.3
Identities = 31/97 (31%), Positives = 47/97 (48%)
Frame = +1
Query: 163 VKQNAAKIRVKRLELDENLLMYFRKEEFYYCHDSEKICKTGDIVLIQALPEKLTKLITHE 342
++Q A K EL EN L +K++ + E D ++QA KL+
Sbjct: 633 IEQIKATFSEKEKEL-ENKLEELKKQQ-----EKELFKLNQDNYILQA---KLSSFEETN 683
Query: 343 IKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYG 453
K+ FG+ DPVTG+K+ K+ KE E++T L G
Sbjct: 684 KKQRWLHFGEAADPVTGEKL-KQIQKEIQEQETLLQG 719
>AL138742-1|CAI22698.2| 1327|Homo sapiens KIAA1009 protein.
Length = 1327
Score = 31.1 bits (67), Expect = 3.3
Identities = 31/97 (31%), Positives = 47/97 (48%)
Frame = +1
Query: 163 VKQNAAKIRVKRLELDENLLMYFRKEEFYYCHDSEKICKTGDIVLIQALPEKLTKLITHE 342
++Q A K EL EN L +K++ + E D ++QA KL+
Sbjct: 557 IEQIKATFSEKEKEL-ENKLEELKKQQ-----EKELFKLNQDNYILQA---KLSSFEETN 607
Query: 343 IKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYG 453
K+ FG+ DPVTG+K+ K+ KE E++T L G
Sbjct: 608 KKQRWLHFGEAADPVTGEKL-KQIQKEIQEQETLLQG 643
>AB023226-1|BAA76853.2| 1345|Homo sapiens KIAA1009 protein protein.
Length = 1345
Score = 31.1 bits (67), Expect = 3.3
Identities = 31/97 (31%), Positives = 47/97 (48%)
Frame = +1
Query: 163 VKQNAAKIRVKRLELDENLLMYFRKEEFYYCHDSEKICKTGDIVLIQALPEKLTKLITHE 342
++Q A K EL EN L +K++ + E D ++QA KL+
Sbjct: 575 IEQIKATFSEKEKEL-ENKLEELKKQQ-----EKELFKLNQDNYILQA---KLSSFEETN 625
Query: 343 IKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYG 453
K+ FG+ DPVTG+K+ K+ KE E++T L G
Sbjct: 626 KKQRWLHFGEAADPVTGEKL-KQIQKEIQEQETLLQG 661
>BC041560-1|AAH41560.1| 859|Homo sapiens ABCC4 protein protein.
Length = 859
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 286 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYGRLKS 465
++ + Q L EK+T L+TH++ + + I GK V K Y E ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 466 TFNYNKAPP 492
++ PP
Sbjct: 634 DNEESEQPP 642
>AY207008-1|AAO37649.1| 1325|Homo sapiens ATP-binding cassette
transporter C4 protein.
Length = 1325
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 286 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYGRLKS 465
++ + Q L EK+T L+TH++ + + I GK V K Y E ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 466 TFNYNKAPP 492
++ PP
Sbjct: 634 DNEESEQPP 642
>AY081219-1|AAL88745.1| 1325|Homo sapiens multidrug
resistance-associated protein protein.
Length = 1325
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 286 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYGRLKS 465
++ + Q L EK+T L+TH++ + + I GK V K Y E ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 466 TFNYNKAPP 492
++ PP
Sbjct: 634 DNEESEQPP 642
>AL356257-1|CAI16722.1| 1325|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 4 protein.
Length = 1325
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 286 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYGRLKS 465
++ + Q L EK+T L+TH++ + + I GK V K Y E ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 466 TFNYNKAPP 492
++ PP
Sbjct: 634 DNEESEQPP 642
>AL157818-1|CAC36037.2| 1325|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 4 protein.
Length = 1325
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 286 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYGRLKS 465
++ + Q L EK+T L+TH++ + + I GK V K Y E ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 466 TFNYNKAPP 492
++ PP
Sbjct: 634 DNEESEQPP 642
>AL139381-1|CAI16589.1| 1325|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 4 protein.
Length = 1325
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 286 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYGRLKS 465
++ + Q L EK+T L+TH++ + + I GK V K Y E ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 466 TFNYNKAPP 492
++ PP
Sbjct: 634 DNEESEQPP 642
>AF541977-1|AAN17334.1| 1278|Homo sapiens ATP-binding cassette
protein C4 splice variant A protein.
Length = 1278
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 286 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYGRLKS 465
++ + Q L EK+T L+TH++ + + I GK V K Y E ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 466 TFNYNKAPP 492
++ PP
Sbjct: 634 DNEESEQPP 642
>AF071203-1|AAC27077.1| 893|Homo sapiens ABC transporter MOAT-B
isoform protein.
Length = 893
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 286 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYGRLKS 465
++ + Q L EK+T L+TH++ + + I GK V K Y E ++ + LK
Sbjct: 165 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 223
Query: 466 TFNYNKAPP 492
++ PP
Sbjct: 224 DNEESEQPP 232
>AF071202-1|AAC27076.1| 1325|Homo sapiens ABC transporter MOAT-B
protein.
Length = 1325
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 286 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYGRLKS 465
++ + Q L EK+T L+TH++ + + I GK V K Y E ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 466 TFNYNKAPP 492
++ PP
Sbjct: 634 DNEESEQPP 642
>AB208973-1|BAD92210.1| 776|Homo sapiens ABCC4 protein variant
protein.
Length = 776
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 286 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYGRLKS 465
++ + Q L EK+T L+TH++ + + I GK V K Y E ++ + LK
Sbjct: 492 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 550
Query: 466 TFNYNKAPP 492
++ PP
Sbjct: 551 DNEESEQPP 559
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,746,344
Number of Sequences: 237096
Number of extensions: 1870371
Number of successful extensions: 3583
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3583
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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