Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16c18
         (618 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              23   1.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.2  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   5.5  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   7.3  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   7.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.6  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   9.6  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 313 EKLTKLITHEIKEVVYPFGDITDPVTGKKVSK 408
           E+ TKL + ++  +V    DIT+  + KK SK
Sbjct: 86  ERTTKLDSEQVNRLVNNCKDITESNSCKKSSK 117


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 142 LGQCVPTVKQNAA 180
           LG C P VKQ AA
Sbjct: 13  LGVCAPNVKQRAA 25


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
          precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 87 FLMIRFAVFLYFENI 43
          F++I + +FLYF ++
Sbjct: 16 FILINYFIFLYFNSL 30


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +1

Query: 394 KKVSKEQYKEDIERQTELYGRLKSTFNYNKAPPRGWQDGKKDFTSK 531
           ++ S+++Y    ER+ + Y   +    Y +      QD  +  TSK
Sbjct: 32  ERTSRKRYSRSREREQKSYKNEREYRKYRETSKERSQDRTERETSK 77


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +1

Query: 394 KKVSKEQYKEDIERQTELYGRLKSTFNYNKAPPRGWQDGKKDFTSK 531
           ++ S+++Y    ER+ + Y   +    Y +      QD  +  TSK
Sbjct: 32  ERTSRKRYSRSREREQKSYKNEREYRKYRETSKERSQDRTERETSK 77


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -2

Query: 347 FISWVINLVSFSGNAWIRTMSPVLHIFSESW 255
           F  W   L S +     RTM P  H+   SW
Sbjct: 446 FEQWKSILESGTTTLQTRTMHPYDHLVWNSW 476


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 475 YNKAPPRGWQDGKKDFTSKPTYTKFHVFDEN 567
           YN A     +     F   P YTK+ + DE+
Sbjct: 213 YNNADDSFQRLTSSTFVYDPRYTKYTINDES 243


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,845
Number of Sequences: 438
Number of extensions: 3984
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)