Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16c10
         (687 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ496103-1|ABF47092.1|  459|Homo sapiens heme carrier protein 1 ...    40   0.006
BC010691-1|AAH10691.1|  431|Homo sapiens SLC46A1 protein protein.      40   0.006
AK054669-1|BAB70789.1|  459|Homo sapiens protein ( Homo sapiens ...    40   0.006
D78367-1|BAA11376.1|  494|Homo sapiens K12 keratin protein.            32   2.2  
AF137286-1|AAF61432.1|  494|Homo sapiens keratin 12 protein.           32   2.2  
AB007119-1|BAA25063.1|  494|Homo sapiens keratin 12 protein.           32   2.2  
BC107768-1|AAI07769.1|  406|Homo sapiens HIAT1 protein protein.        31   2.9  
BC064409-1|AAH64409.1|  375|Homo sapiens HIAT1 protein protein.        31   2.9  
AK096669-1|BAC04836.1|  372|Homo sapiens protein ( Homo sapiens ...    31   2.9  
AK057172-1|BAB71375.1|  490|Homo sapiens protein ( Homo sapiens ...    31   2.9  
AF427492-1|AAL25115.1|  490|Homo sapiens putative tetracycline t...    31   2.9  

>DQ496103-1|ABF47092.1|  459|Homo sapiens heme carrier protein 1
           protein.
          Length = 459

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
 Frame = +3

Query: 336 EIQQIISHIESWRTIIQTAIPTLLVIFMGAWSDRTGNRKICILLPIFGEFMVCVSNVLST 515
           E++ + SH   +  +    +       +GAWSD  G R + +L  + G  +  + +V   
Sbjct: 77  EVETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLASL-GLLLQALVSV--- 132

Query: 516 YFFYEIPVETTMF-LEAIFPAITGGWVLVYLGVFSYISDITDEKSRTFRVGLV 671
            F  ++ +    F L  I  A+ G +  +    F+ ++D++  +SRTFR+ L+
Sbjct: 133 -FVVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFRMALL 184


>BC010691-1|AAH10691.1|  431|Homo sapiens SLC46A1 protein protein.
          Length = 431

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
 Frame = +3

Query: 336 EIQQIISHIESWRTIIQTAIPTLLVIFMGAWSDRTGNRKICILLPIFGEFMVCVSNVLST 515
           E++ + SH   +  +    +       +GAWSD  G R + +L  + G  +  + +V   
Sbjct: 77  EVETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLASL-GLLLQALVSV--- 132

Query: 516 YFFYEIPVETTMF-LEAIFPAITGGWVLVYLGVFSYISDITDEKSRTFRVGLV 671
            F  ++ +    F L  I  A+ G +  +    F+ ++D++  +SRTFR+ L+
Sbjct: 133 -FVVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFRMALL 184


>AK054669-1|BAB70789.1|  459|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30107 fis, clone BNGH41000198, weakly similar to
           TETRACYCLINE RESISTANCE PROTEIN, CLASS E. ).
          Length = 459

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
 Frame = +3

Query: 336 EIQQIISHIESWRTIIQTAIPTLLVIFMGAWSDRTGNRKICILLPIFGEFMVCVSNVLST 515
           E++ + SH   +  +    +       +GAWSD  G R + +L  + G  +  + +V   
Sbjct: 77  EVETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLASL-GLLLQALVSV--- 132

Query: 516 YFFYEIPVETTMF-LEAIFPAITGGWVLVYLGVFSYISDITDEKSRTFRVGLV 671
            F  ++ +    F L  I  A+ G +  +    F+ ++D++  +SRTFR+ L+
Sbjct: 133 -FVVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFRMALL 184


>D78367-1|BAA11376.1|  494|Homo sapiens K12 keratin protein.
          Length = 494

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/50 (32%), Positives = 32/50 (64%)
 Frame = +3

Query: 219 RLAIQNLNLDKACRVKSQFGDVVCDALIERKGNYTTQEAEIQQIISHIES 368
           R A QNL ++   ++  +    + D+L E +G+Y  Q +++QQ+IS++E+
Sbjct: 349 RRAFQNLEIELQSQLAMKKS--LEDSLAEAEGDYCAQLSQVQQLISNLEA 396


>AF137286-1|AAF61432.1|  494|Homo sapiens keratin 12 protein.
          Length = 494

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/50 (32%), Positives = 32/50 (64%)
 Frame = +3

Query: 219 RLAIQNLNLDKACRVKSQFGDVVCDALIERKGNYTTQEAEIQQIISHIES 368
           R A QNL ++   ++  +    + D+L E +G+Y  Q +++QQ+IS++E+
Sbjct: 349 RRAFQNLEIELQSQLAMKKS--LEDSLAEAEGDYCAQLSQVQQLISNLEA 396


>AB007119-1|BAA25063.1|  494|Homo sapiens keratin 12 protein.
          Length = 494

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/50 (32%), Positives = 32/50 (64%)
 Frame = +3

Query: 219 RLAIQNLNLDKACRVKSQFGDVVCDALIERKGNYTTQEAEIQQIISHIES 368
           R A QNL ++   ++  +    + D+L E +G+Y  Q +++QQ+IS++E+
Sbjct: 349 RRAFQNLEIELQSQLAMKKS--LEDSLAEAEGDYCAQLSQVQQLISNLEA 396


>BC107768-1|AAI07769.1|  406|Homo sapiens HIAT1 protein protein.
          Length = 406

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +3

Query: 573 AITGGWVLVYLGVFSYISDITDEKSRTFRVGLVN 674
           +++G + + +  VF+Y++DIT E  R+   GLV+
Sbjct: 47  SVSGVFAVTFSVVFAYVADITQEHERSMAYGLVS 80


>BC064409-1|AAH64409.1|  375|Homo sapiens HIAT1 protein protein.
          Length = 375

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +3

Query: 573 AITGGWVLVYLGVFSYISDITDEKSRTFRVGLVN 674
           +++G + + +  VF+Y++DIT E  R+   GLV+
Sbjct: 16  SVSGVFAVTFSVVFAYVADITQEHERSMAYGLVS 49


>AK096669-1|BAC04836.1|  372|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39350 fis, clone PEBLM2000222, highly similar to
           Mouse mRNA for tetracycline transporter-like protein. ).
          Length = 372

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +3

Query: 573 AITGGWVLVYLGVFSYISDITDEKSRTFRVGLVN 674
           +++G + + +  VF+Y++DIT E  R+   GLV+
Sbjct: 13  SVSGVFAVTFSVVFAYVADITQEHERSMAYGLVS 46


>AK057172-1|BAB71375.1|  490|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32610 fis, clone STOMA2000055, highly similar to
           Mouse mRNA for tetracycline transporter-like protein. ).
          Length = 490

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +3

Query: 573 AITGGWVLVYLGVFSYISDITDEKSRTFRVGLVN 674
           +++G + + +  VF+Y++DIT E  R+   GLV+
Sbjct: 131 SVSGVFAVTFSMVFAYVADITQEHERSMAYGLVS 164


>AF427492-1|AAL25115.1|  490|Homo sapiens putative tetracycline
           transporter-like protein protein.
          Length = 490

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +3

Query: 573 AITGGWVLVYLGVFSYISDITDEKSRTFRVGLVN 674
           +++G + + +  VF+Y++DIT E  R+   GLV+
Sbjct: 131 SVSGVFAVTFSVVFAYVADITQEHERSMAYGLVS 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,176,144
Number of Sequences: 237096
Number of extensions: 2162258
Number of successful extensions: 4458
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4454
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)