Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16c06
         (605 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D78367-1|BAA11376.1|  494|Homo sapiens K12 keratin protein.            32   1.8  
AF137286-1|AAF61432.1|  494|Homo sapiens keratin 12 protein.           32   1.8  
AB007119-1|BAA25063.1|  494|Homo sapiens keratin 12 protein.           32   1.8  

>D78367-1|BAA11376.1|  494|Homo sapiens K12 keratin protein.
          Length = 494

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 16/50 (32%), Positives = 32/50 (64%)
 Frame = +3

Query: 219 RLAIQNLNLDKACRVKSQFGDVVCDALIERKGNYTTQEAEIQQIISHIES 368
           R A QNL ++   ++  +    + D+L E +G+Y  Q +++QQ+IS++E+
Sbjct: 349 RRAFQNLEIELQSQLAMKKS--LEDSLAEAEGDYCAQLSQVQQLISNLEA 396


>AF137286-1|AAF61432.1|  494|Homo sapiens keratin 12 protein.
          Length = 494

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 16/50 (32%), Positives = 32/50 (64%)
 Frame = +3

Query: 219 RLAIQNLNLDKACRVKSQFGDVVCDALIERKGNYTTQEAEIQQIISHIES 368
           R A QNL ++   ++  +    + D+L E +G+Y  Q +++QQ+IS++E+
Sbjct: 349 RRAFQNLEIELQSQLAMKKS--LEDSLAEAEGDYCAQLSQVQQLISNLEA 396


>AB007119-1|BAA25063.1|  494|Homo sapiens keratin 12 protein.
          Length = 494

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 16/50 (32%), Positives = 32/50 (64%)
 Frame = +3

Query: 219 RLAIQNLNLDKACRVKSQFGDVVCDALIERKGNYTTQEAEIQQIISHIES 368
           R A QNL ++   ++  +    + D+L E +G+Y  Q +++QQ+IS++E+
Sbjct: 349 RRAFQNLEIELQSQLAMKKS--LEDSLAEAEGDYCAQLSQVQQLISNLEA 396


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,658,479
Number of Sequences: 237096
Number of extensions: 1889328
Number of successful extensions: 4177
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4176
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)