Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16c01
         (573 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR541820-1|CAG46619.1|  286|Homo sapiens RNASEH1 protein.              35   0.23 
BT019670-1|AAV38476.1|  286|Homo sapiens ribonuclease H1 protein.      35   0.23 
BC002973-1|AAH02973.1|  286|Homo sapiens ribonuclease H1 protein.      35   0.23 
AJ224117-1|CAA11835.1|  286|Homo sapiens RNase HII protein.            35   0.23 
AF048995-1|AAC78564.1|  286|Homo sapiens ribonuclease H1 protein.      35   0.23 
AF048994-1|AAC78563.1|  286|Homo sapiens ribonuclease H1 protein.      35   0.23 
AF039652-1|AAC09261.1|  286|Homo sapiens ribonuclease H type II ...    35   0.23 
AC108488-1|AAX82026.1|  286|Homo sapiens unknown protein.              35   0.23 
U59752-1|AAB17532.1|  266|Homo sapiens protein ( Human Sec7p-lik...    32   1.2  
AJ309825-1|CAC32844.1|  153|Homo sapiens immunoglobulin G heavy ...    32   1.2  
X99753-1|CAA68084.1|  399|Homo sapiens Arno protein (ARF exchang...    31   3.8  
U70728-1|AAB09591.1|  400|Homo sapiens cytohesin-2 protein.            31   3.8  
BC038713-1|AAH38713.1|  400|Homo sapiens pleckstrin homology, Se...    31   3.8  
BC004361-1|AAH04361.1|  400|Homo sapiens pleckstrin homology, Se...    31   3.8  

>CR541820-1|CAG46619.1|  286|Homo sapiens RNASEH1 protein.
          Length = 286

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 484 KNVNIAFMWVPSHRGITGNEKADKAARE 401
           + ++I +M VP H G  GNE+AD+ ARE
Sbjct: 252 QGMDIQWMHVPGHSGFIGNEEADRLARE 279


>BT019670-1|AAV38476.1|  286|Homo sapiens ribonuclease H1 protein.
          Length = 286

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 484 KNVNIAFMWVPSHRGITGNEKADKAARE 401
           + ++I +M VP H G  GNE+AD+ ARE
Sbjct: 252 QGMDIQWMHVPGHSGFIGNEEADRLARE 279


>BC002973-1|AAH02973.1|  286|Homo sapiens ribonuclease H1 protein.
          Length = 286

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 484 KNVNIAFMWVPSHRGITGNEKADKAARE 401
           + ++I +M VP H G  GNE+AD+ ARE
Sbjct: 252 QGMDIQWMHVPGHSGFIGNEEADRLARE 279


>AJ224117-1|CAA11835.1|  286|Homo sapiens RNase HII protein.
          Length = 286

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 484 KNVNIAFMWVPSHRGITGNEKADKAARE 401
           + ++I +M VP H G  GNE+AD+ ARE
Sbjct: 252 QGMDIQWMHVPGHSGFIGNEEADRLARE 279


>AF048995-1|AAC78564.1|  286|Homo sapiens ribonuclease H1 protein.
          Length = 286

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 484 KNVNIAFMWVPSHRGITGNEKADKAARE 401
           + ++I +M VP H G  GNE+AD+ ARE
Sbjct: 252 QGMDIQWMHVPGHSGFIGNEEADRLARE 279


>AF048994-1|AAC78563.1|  286|Homo sapiens ribonuclease H1 protein.
          Length = 286

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 484 KNVNIAFMWVPSHRGITGNEKADKAARE 401
           + ++I +M VP H G  GNE+AD+ ARE
Sbjct: 252 QGMDIQWMHVPGHSGFIGNEEADRLARE 279


>AF039652-1|AAC09261.1|  286|Homo sapiens ribonuclease H type II
           protein.
          Length = 286

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 484 KNVNIAFMWVPSHRGITGNEKADKAARE 401
           + ++I +M VP H G  GNE+AD+ ARE
Sbjct: 252 QGMDIQWMHVPGHSGFIGNEEADRLARE 279


>AC108488-1|AAX82026.1|  286|Homo sapiens unknown protein.
          Length = 286

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -3

Query: 484 KNVNIAFMWVPSHRGITGNEKADKAARE 401
           + ++I +M VP H G  GNE+AD+ ARE
Sbjct: 252 QGMDIQWMHVPGHSGFIGNEEADRLARE 279


>U59752-1|AAB17532.1|  266|Homo sapiens protein ( Human Sec7p-like
           protein mRNA, partial cds. ).
          Length = 266

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 289 QENKGKWYGSIQDNLPVKPWYEKLKTSESRVFI 191
           QE K +W  SIQ  + V P+YE L   E R+ +
Sbjct: 227 QEEKDEWIKSIQSAVSVDPFYEILTAREKRISV 259


>AJ309825-1|CAC32844.1|  153|Homo sapiens immunoglobulin G heavy
           chain variable region protein.
          Length = 153

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +2

Query: 104 YTLAI*NNAKSC*V*RRSIMAKSQSVYCCDENSTFTSFQFFIPW 235
           +T++  N  KS  +   S+ A+  +VY C  +ST TS  +F PW
Sbjct: 84  FTISRDNGKKSLYLKMNSLRAEDTAVYYCARDSTGTSVGWFDPW 127


>X99753-1|CAA68084.1|  399|Homo sapiens Arno protein (ARF exchange
           factor) protein.
          Length = 399

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 289 QENKGKWYGSIQDNLPVKPWYEKLKTSESRVFI 191
           QE K +W  SIQ  + V P+YE L   + R+ +
Sbjct: 360 QEEKDEWIKSIQAAVSVDPFYEMLAARKKRISV 392


>U70728-1|AAB09591.1|  400|Homo sapiens cytohesin-2 protein.
          Length = 400

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 289 QENKGKWYGSIQDNLPVKPWYEKLKTSESRVFI 191
           QE K +W  SIQ  + V P+YE L   + R+ +
Sbjct: 361 QEEKDEWIKSIQAAVSVDPFYEMLAARKKRISV 393


>BC038713-1|AAH38713.1|  400|Homo sapiens pleckstrin homology, Sec7
           and coiled-coil domains 2 (cytohesin-2) protein.
          Length = 400

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 289 QENKGKWYGSIQDNLPVKPWYEKLKTSESRVFI 191
           QE K +W  SIQ  + V P+YE L   + R+ +
Sbjct: 361 QEEKDEWIKSIQAAVSVDPFYEMLAARKKRISV 393


>BC004361-1|AAH04361.1|  400|Homo sapiens pleckstrin homology, Sec7
           and coiled-coil domains 2 (cytohesin-2) protein.
          Length = 400

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 289 QENKGKWYGSIQDNLPVKPWYEKLKTSESRVFI 191
           QE K +W  SIQ  + V P+YE L   + R+ +
Sbjct: 361 QEEKDEWIKSIQAAVSVDPFYEMLAARKKRISV 393


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,754,829
Number of Sequences: 237096
Number of extensions: 1773828
Number of successful extensions: 7388
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7388
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)