Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16b24
         (550 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118855-1|AAM50715.1|  240|Drosophila melanogaster GM21150p pro...    91   9e-19
AE014298-1844|AAF48224.1|  240|Drosophila melanogaster CG2200-PA...    91   9e-19

>AY118855-1|AAM50715.1|  240|Drosophila melanogaster GM21150p
           protein.
          Length = 240

 Score = 91.1 bits (216), Expect = 9e-19
 Identities = 39/103 (37%), Positives = 57/103 (55%)
 Frame = +1

Query: 235 MASRRQAXXXXXXNCHGYNLLEFAKAEISSFLQRNNVKDLIFIPYAQNDFDGYTTKIKNV 414
           MAS R          HG+  LE A+ ++    +  NVK ++F+PYA  D D YT  +++ 
Sbjct: 1   MASARNLLLLSSSRLHGHGYLEHARGQLEDLFKSANVKTVLFVPYALRDHDKYTATVRDA 60

Query: 415 IDQWGFTVTGLHTYPKPETAISESKAIFIGGGKYFFTFEKIVQ 543
           +  WGF V GLHT P  E A+ E++AIF+GGG  F     + +
Sbjct: 61  LQPWGFNVEGLHTKPDREQALREAQAIFVGGGNTFVLLRSLYE 103


>AE014298-1844|AAF48224.1|  240|Drosophila melanogaster CG2200-PA
           protein.
          Length = 240

 Score = 91.1 bits (216), Expect = 9e-19
 Identities = 39/103 (37%), Positives = 57/103 (55%)
 Frame = +1

Query: 235 MASRRQAXXXXXXNCHGYNLLEFAKAEISSFLQRNNVKDLIFIPYAQNDFDGYTTKIKNV 414
           MAS R          HG+  LE A+ ++    +  NVK ++F+PYA  D D YT  +++ 
Sbjct: 1   MASARNLLLLSSSRLHGHGYLEHARGQLEDLFKSANVKTVLFVPYALRDHDKYTATVRDA 60

Query: 415 IDQWGFTVTGLHTYPKPETAISESKAIFIGGGKYFFTFEKIVQ 543
           +  WGF V GLHT P  E A+ E++AIF+GGG  F     + +
Sbjct: 61  LQPWGFNVEGLHTKPDREQALREAQAIFVGGGNTFVLLRSLYE 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,438,097
Number of Sequences: 53049
Number of extensions: 425825
Number of successful extensions: 793
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)