Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16b18
         (435 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457189-1|CAG33470.1|   85|Homo sapiens BM-002 protein.              154   1e-37
BC005193-1|AAH05193.1|   85|Homo sapiens ubiquitin-fold modifier...   154   1e-37
AL356863-1|CAH70411.1|   85|Homo sapiens ubiquitin-fold modifier...   154   1e-37
AB154404-1|BAD15373.1|   85|Homo sapiens Ubiquitin-fold modifier...   154   1e-37
Z70222-1|CAA94181.1|   80|Homo sapiens ORF protein.                   138   8e-33
AL356863-3|CAH70414.1|  103|Homo sapiens ubiquitin-fold modifier...   118   9e-27
AL356863-2|CAH70412.1|   80|Homo sapiens ubiquitin-fold modifier...   115   6e-26
BC019340-1|AAH19340.1|  298|Homo sapiens similar to Cytochrome c...    29   6.9  

>CR457189-1|CAG33470.1|   85|Homo sapiens BM-002 protein.
          Length = 85

 Score =  154 bits (374), Expect = 1e-37
 Identities = 73/83 (87%), Positives = 80/83 (96%)
 Frame = +3

Query: 66  MSKVTFKITLTSDPKLPFKVLSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQ 245
           MSKV+FKITLTSDP+LP+KVLSVPE+TPFTAVLKFAAEEF+V  ATSAIIT+DGIGINP 
Sbjct: 1   MSKVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPA 60

Query: 246 QTAGNVFLKHGSELRLIPRDRVG 314
           QTAGNVFLKHGSELR+IPRDRVG
Sbjct: 61  QTAGNVFLKHGSELRIIPRDRVG 83


>BC005193-1|AAH05193.1|   85|Homo sapiens ubiquitin-fold modifier 1
           protein.
          Length = 85

 Score =  154 bits (374), Expect = 1e-37
 Identities = 73/83 (87%), Positives = 80/83 (96%)
 Frame = +3

Query: 66  MSKVTFKITLTSDPKLPFKVLSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQ 245
           MSKV+FKITLTSDP+LP+KVLSVPE+TPFTAVLKFAAEEF+V  ATSAIIT+DGIGINP 
Sbjct: 1   MSKVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPA 60

Query: 246 QTAGNVFLKHGSELRLIPRDRVG 314
           QTAGNVFLKHGSELR+IPRDRVG
Sbjct: 61  QTAGNVFLKHGSELRIIPRDRVG 83


>AL356863-1|CAH70411.1|   85|Homo sapiens ubiquitin-fold modifier 1
           protein.
          Length = 85

 Score =  154 bits (374), Expect = 1e-37
 Identities = 73/83 (87%), Positives = 80/83 (96%)
 Frame = +3

Query: 66  MSKVTFKITLTSDPKLPFKVLSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQ 245
           MSKV+FKITLTSDP+LP+KVLSVPE+TPFTAVLKFAAEEF+V  ATSAIIT+DGIGINP 
Sbjct: 1   MSKVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPA 60

Query: 246 QTAGNVFLKHGSELRLIPRDRVG 314
           QTAGNVFLKHGSELR+IPRDRVG
Sbjct: 61  QTAGNVFLKHGSELRIIPRDRVG 83


>AB154404-1|BAD15373.1|   85|Homo sapiens Ubiquitin-fold modifier 1
           protein.
          Length = 85

 Score =  154 bits (374), Expect = 1e-37
 Identities = 73/83 (87%), Positives = 80/83 (96%)
 Frame = +3

Query: 66  MSKVTFKITLTSDPKLPFKVLSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQ 245
           MSKV+FKITLTSDP+LP+KVLSVPE+TPFTAVLKFAAEEF+V  ATSAIIT+DGIGINP 
Sbjct: 1   MSKVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPA 60

Query: 246 QTAGNVFLKHGSELRLIPRDRVG 314
           QTAGNVFLKHGSELR+IPRDRVG
Sbjct: 61  QTAGNVFLKHGSELRIIPRDRVG 83


>Z70222-1|CAA94181.1|   80|Homo sapiens ORF protein.
          Length = 80

 Score =  138 bits (334), Expect = 8e-33
 Identities = 66/77 (85%), Positives = 73/77 (94%)
 Frame = +3

Query: 66  MSKVTFKITLTSDPKLPFKVLSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQ 245
           MSKV+FKITLT DP+LP+KVLSVPE+TPFTAVLKFAAEEF+V  ATSAIIT+DGIGINP 
Sbjct: 1   MSKVSFKITLTWDPRLPYKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPA 60

Query: 246 QTAGNVFLKHGSELRLI 296
           QTAGNVFLKHGSELR+I
Sbjct: 61  QTAGNVFLKHGSELRII 77


>AL356863-3|CAH70414.1|  103|Homo sapiens ubiquitin-fold modifier 1
           protein.
          Length = 103

 Score =  118 bits (284), Expect = 9e-27
 Identities = 56/63 (88%), Positives = 60/63 (95%)
 Frame = +3

Query: 126 LSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQQTAGNVFLKHGSELRLIPRD 305
           LSVPE+TPFTAVLKFAAEEF+V  ATSAIIT+DGIGINP QTAGNVFLKHGSELR+IPRD
Sbjct: 39  LSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRIIPRD 98

Query: 306 RVG 314
           RVG
Sbjct: 99  RVG 101


>AL356863-2|CAH70412.1|   80|Homo sapiens ubiquitin-fold modifier 1
           protein.
          Length = 80

 Score =  115 bits (277), Expect = 6e-26
 Identities = 55/69 (79%), Positives = 61/69 (88%)
 Frame = +3

Query: 69  SKVTFKITLTSDPKLPFKVLSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQQ 248
           SKV+FKITLTSDP+LP+KVLSVPE+TPFTAVLKFAAEEF+V  ATSAIIT+DGIGINP Q
Sbjct: 2   SKVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQ 61

Query: 249 TAGNVFLKH 275
           TAG     H
Sbjct: 62  TAGEYLKTH 70


>BC019340-1|AAH19340.1|  298|Homo sapiens similar to Cytochrome c,
           somatic protein.
          Length = 298

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 318 RSRHGPLGSILILNRASGIHYRLSAEDLCRY 226
           RS H PL  +LI+ +A   H  L  E  C Y
Sbjct: 53  RSEHMPLNGMLIMKQAKIYHNELKIEGNCEY 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,696,405
Number of Sequences: 237096
Number of extensions: 1153343
Number of successful extensions: 2074
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2074
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)