Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16b08
         (609 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66519-3|CAA91372.1|  634|Caenorhabditis elegans Hypothetical pr...   221   3e-58
Z66519-2|CAA91381.1|  634|Caenorhabditis elegans Hypothetical pr...   221   3e-58
AF067623-1|AAC17553.2|  640|Caenorhabditis elegans Hypothetical ...    88   4e-18
AL117205-6|CAB55166.2|  167|Caenorhabditis elegans Hypothetical ...    30   1.5  
AL117205-2|CAB55164.1|  169|Caenorhabditis elegans Hypothetical ...    30   1.5  
U97551-3|AAB52860.2|  215|Caenorhabditis elegans Hypothetical pr...    29   2.6  

>Z66519-3|CAA91372.1|  634|Caenorhabditis elegans Hypothetical
           protein B0334.3b protein.
          Length = 634

 Score =  221 bits (540), Expect = 3e-58
 Identities = 105/178 (58%), Positives = 127/178 (71%), Gaps = 2/178 (1%)
 Frame = +2

Query: 80  SQKLNGSMG--IDGNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQA 253
           S+KL    G  +DG +I A +LK QGVEY+FG+VG PVIE  MA Q+ G+KYIG RNEQA
Sbjct: 61  SRKLRNHDGSNMDGASITAAALKSQGVEYMFGVVGFPVIEVGMAAQAHGIKYIGCRNEQA 120

Query: 254 ACYAAQATGYLTGKPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGF 433
           A YAAQA GYLTGKP   LVVSGPG+LH IGG+ANA VNCWP+V I G+   D E  G F
Sbjct: 121 AAYAAQAMGYLTGKPVALLVVSGPGILHAIGGLANATVNCWPVVCIGGTADVDLENRGAF 180

Query: 434 QEWPQVDSSRMYCKYAARPPSPRLIPQHVEKAVRLALXGRPGVSYLDMPGTLLMAEVD 607
           QEW Q +S R  CK+ +RP S   IP H+EKAVR A+ GRPG  Y+D+PG L++   +
Sbjct: 181 QEWSQQESVRNSCKHVSRPTSLHTIPAHIEKAVRCAMYGRPGAVYVDLPGNLVLTSTE 238


>Z66519-2|CAA91381.1|  634|Caenorhabditis elegans Hypothetical
           protein B0334.3a protein.
          Length = 634

 Score =  221 bits (540), Expect = 3e-58
 Identities = 105/178 (58%), Positives = 127/178 (71%), Gaps = 2/178 (1%)
 Frame = +2

Query: 80  SQKLNGSMG--IDGNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQA 253
           S+KL    G  +DG +I A +LK QGVEY+FG+VG PVIE  MA Q+ G+KYIG RNEQA
Sbjct: 61  SRKLRNHDGSNMDGASITAAALKSQGVEYMFGVVGFPVIEVGMAAQAHGIKYIGCRNEQA 120

Query: 254 ACYAAQATGYLTGKPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGF 433
           A YAAQA GYLTGKP   LVVSGPG+LH IGG+ANA VNCWP+V I G+   D E  G F
Sbjct: 121 AAYAAQAMGYLTGKPVALLVVSGPGILHAIGGLANATVNCWPVVCIGGTADVDLENRGAF 180

Query: 434 QEWPQVDSSRMYCKYAARPPSPRLIPQHVEKAVRLALXGRPGVSYLDMPGTLLMAEVD 607
           QEW Q +S R  CK+ +RP S   IP H+EKAVR A+ GRPG  Y+D+PG L++   +
Sbjct: 181 QEWSQQESVRNSCKHVSRPTSLHTIPAHIEKAVRCAMYGRPGAVYVDLPGNLVLTSTE 238


>AF067623-1|AAC17553.2|  640|Caenorhabditis elegans Hypothetical
           protein T26C12.1 protein.
          Length = 640

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
 Frame = +2

Query: 8   DDTF*VIMLLGRLS-QLVFRRSFCVSQKLNGSMGIDGNTILAESLKKQGVEYVFGIVGIP 184
           D+   ++ LLG  + Q V   +F V +K        G  ++A  LK   VE +F + G  
Sbjct: 26  DELTSMVKLLGSGNGQHVLSNAFQVDEKSKRH----GGELVASVLKAHDVEEIFVLCGGH 81

Query: 185 VIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTGKPGVCLVVSGPGLLHCIGGMANAQ 364
           +    +A +  G+K +  R+E  A +AA A   L    GV  V +GPGL + I  + NAQ
Sbjct: 82  ISPILVAAEKLGIKIVDTRHEVTAVFAADAVARLRQSIGVAAVTAGPGLTNTITAVKNAQ 141

Query: 365 VNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYCKYAARPPSPRLIPQHVEKAVRLAL 544
           +   PL++I G+ P   +  G  Q+  Q+   R  CKY AR    R I   V +A++ A 
Sbjct: 142 MAESPLLLIGGAAPTLLKGRGALQDIDQMVLFRPLCKYVARVERLRDIVPTVREAIKAAK 201

Query: 545 XGRPGVSYLDMPGTLL 592
            G PG  +++ P  +L
Sbjct: 202 SGCPGPVFVEFPVDVL 217


>AL117205-6|CAB55166.2|  167|Caenorhabditis elegans Hypothetical
           protein Y116A8A.7 protein.
          Length = 167

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -1

Query: 150 PCFFKLSAKIVFPSIPMLPFNF*--DTQNDLRNTNWLNLPSN 31
           PC      + +F +I   PFN+   +T+ND     W+N P+N
Sbjct: 99  PCGILKKTQNMFFNITFAPFNYTTENTKNDRITVKWINTPNN 140


>AL117205-2|CAB55164.1|  169|Caenorhabditis elegans Hypothetical
           protein Y116A8A.2 protein.
          Length = 169

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -1

Query: 150 PCFFKLSAKIVFPSIPMLPFNF*--DTQNDLRNTNWLNLPSN 31
           PC      + +F +I   PFN+   +T+ND     W+N P+N
Sbjct: 101 PCGILKKTQNMFFNITFAPFNYTTENTKNDRITVKWINTPNN 142


>U97551-3|AAB52860.2|  215|Caenorhabditis elegans Hypothetical
           protein T01B10.5 protein.
          Length = 215

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -2

Query: 158 IQHPVSSNFQLRLYFRRYPCCRLIFEIRKMIFEI 57
           ++H ++ NF +  YF  + C   +F I  ++F I
Sbjct: 115 VEHVITQNFDVNGYFMGFVCTLFVFVIAMILFTI 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,906,673
Number of Sequences: 27780
Number of extensions: 376952
Number of successful extensions: 877
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)