Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16b06
(636 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_06_0088 - 10538037-10539463,10539696-10539789 41 7e-04
01_07_0304 - 42628086-42628104,42628828-42630263 39 0.004
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 37 0.012
01_05_0390 - 21720118-21720573,21720667-21721296,21721427-217217... 37 0.012
07_03_1045 + 23528768-23528879,23528979-23530399 34 0.082
02_05_1340 + 35797923-35799881 34 0.082
01_05_0389 + 21716056-21716191,21716275-21716597,21716889-217175... 34 0.11
05_04_0029 - 17321378-17321905,17323348-17323525,17323531-173239... 32 0.33
11_06_0421 + 23331702-23331723,23332161-23332197,23333397-233335... 31 0.58
03_02_0023 + 5065962-5066079,5066179-5067614 31 1.0
01_05_0509 + 22811184-22812038,22813493-22814020 31 1.0
02_04_0324 + 22032748-22032895,22035274-22035593,22035709-22036797 30 1.3
01_05_0586 + 23443371-23444645 30 1.3
12_02_0509 - 19829360-19830400,19831475-19831821,19831920-19832073 30 1.8
03_05_0199 - 21893051-21893509,21893835-21894482,21894566-218948... 30 1.8
11_02_0047 + 7716315-7716420,7716518-7716647,7716785-7716856,771... 29 3.1
01_05_0504 + 22781737-22781799,22782033-22782287,22783652-22784077 29 3.1
11_04_0293 + 15926561-15928834 29 4.1
11_03_0157 + 10897769-10898066,10898308-10899461 28 5.4
07_01_0044 - 348439-349539,351979-352301,352418-352550 27 9.4
06_01_0667 + 4878784-4878900,4879016-4879118,4879256-4879341,487... 27 9.4
>10_06_0088 - 10538037-10539463,10539696-10539789
Length = 506
Score = 41.1 bits (92), Expect = 7e-04
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Frame = +2
Query: 242 GKRQKNESNANKQ-IFTALLATIPTFTYGIQIGWLSPLGPVLKSKQSPADTPLNDDXVSX 418
G+ ++N+ NK + +++ +I + G G +S G +L K+ D ND V
Sbjct: 2 GEEKQNDERKNKYAVGCSIIGSIISVLMGYDTGVMS--GAMLFIKE---DLKTNDTQVQV 56
Query: 419 VATALPLAAICGIPFFSYASXRFGRKLCVIXVSLLSCVSWTIKLTSINTPSLIAARVIAG 598
+A L + A+ G S GR+L + + + V + + N +L+A R +AG
Sbjct: 57 LAGILNVCALVGSLTAGRVSDCVGRRLTISLAACIFLVGSVLMGLAPNFATLLAGRCVAG 116
Query: 599 IASGGCFVAVPV 634
+ G + PV
Sbjct: 117 VGVGYALMIAPV 128
>01_07_0304 - 42628086-42628104,42628828-42630263
Length = 484
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +2
Query: 395 LNDDXVSXVATALPLAAICGIPFFSYASXRFGRKLCVIXVSLLSCVSWTIKLTSINTPSL 574
+ D V + L L ++ G S GR+L +I +++ V + S+N P L
Sbjct: 3 ITDVEVEILLGILNLYSLVGSFAAGRTSDWIGRRLTIILAAVIFFVGAIMMGLSVNYPML 62
Query: 575 IAARVIAGIASGGCFVAVPV 634
+A R +AGI G F+ PV
Sbjct: 63 MAGRFVAGIGVGYAFMIAPV 82
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/99 (26%), Positives = 50/99 (50%)
Frame = +2
Query: 326 IQIGWLSPLGPVLKSKQSPADTPLNDDXVSXVATALPLAAICGIPFFSYASXRFGRKLCV 505
++I LS +GP+++ + + + N+ +S V A L G + + S ++GR++C+
Sbjct: 230 MEIMLLSFVGPLVREEWNISAE--NESLLSSVVFAGMLIGASG---WGFVSDKYGRRICL 284
Query: 506 IXVSLLSCVSWTIKLTSINTPSLIAARVIAGIASGGCFV 622
+ +L + + S N L+A R + GI GG V
Sbjct: 285 LFSTLFASGMGFLSAFSPNYSCLLALRFLVGIGVGGAHV 323
>01_05_0390 -
21720118-21720573,21720667-21721296,21721427-21721749,
21721844-21721973
Length = 512
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +2
Query: 398 NDDXVSXVATALPLAAICGIPFFSYASXRFGRKLCVIXVSLLSCVSWTIKLTSINTPSLI 577
+ + ++ ++L LAA+ F S + + GRK+ ++ + + + ++N LI
Sbjct: 77 DSEPLTLFTSSLYLAALIASLFASVITRKLGRKMTMLGGGFIFLIGAVLNGAAVNVAMLI 136
Query: 578 AARVIAGIASGGCFVAVPV 634
R++ GI G AVP+
Sbjct: 137 IGRILLGIGVGFSIQAVPL 155
>07_03_1045 + 23528768-23528879,23528979-23530399
Length = 510
Score = 34.3 bits (75), Expect = 0.082
Identities = 28/127 (22%), Positives = 52/127 (40%)
Frame = +2
Query: 254 KNESNANKQIFTALLATIPTFTYGIQIGWLSPLGPVLKSKQSPADTPLNDDXVSXVATAL 433
K + N A+LA++ + G IG +S +K D ++D V + L
Sbjct: 13 KKKGNVRFAFACAILASMTSILLGYDIGVMSGASLYIKK-----DFNISDGKVEVLMGIL 67
Query: 434 PLAAICGIPFFSYASXRFGRKLCVIXVSLLSCVSWTIKLTSINTPSLIAARVIAGIASGG 613
L ++ G S GR+ ++ +++ + ++N L+ R +AGI G
Sbjct: 68 NLYSLIGSFAAGRTSDWIGRRYTIVFAAVIFFAGAFLMGFAVNYAMLMFGRFVAGIGVGY 127
Query: 614 CFVAVPV 634
+ PV
Sbjct: 128 ALMIAPV 134
>02_05_1340 + 35797923-35799881
Length = 652
Score = 34.3 bits (75), Expect = 0.082
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = +2
Query: 419 VATALPLAAICGIPFFSYASXRFGRKLCVIXVSLLSCVSWTIKLTSINTPSLIAARVIAG 598
VAT+L + A F S GR+ +I +LL ++ + L S N P L+ AR++ G
Sbjct: 50 VATSL-IGATIVTTFSGPLSDSRGRRPMLIASALLYSLAGLLMLWSPNVPILLLARLVDG 108
Query: 599 IASGGCFVAVPV 634
A G VPV
Sbjct: 109 FAIGLAVTLVPV 120
>01_05_0389 +
21716056-21716191,21716275-21716597,21716889-21717518,
21717602-21718054
Length = 513
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +2
Query: 398 NDDXVSXVATALPLAAICGIPFFSYASXRFGRKLCVIXVSLLSCVSWTIKLTSINTPSLI 577
+ + ++ ++L LAA+ F S + +FGR++ ++ ++ V + + + LI
Sbjct: 79 DSELLTLFTSSLYLAALIASLFASVITRKFGRRITMLGGGVIFLVGAILNGAAADVAMLI 138
Query: 578 AARVIAGIASGGCFVAVPV 634
R++ GI G AVP+
Sbjct: 139 IGRILLGIGVGFSNQAVPL 157
>05_04_0029 -
17321378-17321905,17323348-17323525,17323531-17323910,
17323936-17324052
Length = 400
Score = 32.3 bits (70), Expect = 0.33
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
Frame = +2
Query: 281 IFTALLATIPTFTYGIQIGWLSPLGPVLKSKQSPADTPLNDDXVSXVATALPLAA----- 445
I T L+ + +T IQ P+ ++ K S A T + ++ ++ V T++ +
Sbjct: 272 ILTTLITPLANYTLVIQ-----PVTTAIEEKLS-ATTDVENNWLTRVLTSIAVVISTVVL 325
Query: 446 ICGIPFFSYASXRFGRKLCVIXVSLLSCVSWTIKLTSINTPSLIAARVIAGIASGGCFVA 625
C +PFF Y G L V L+ C+S+ S +I GI G V
Sbjct: 326 ACTVPFFGYLMLFIGSSLNVTVAVLVPCLSYLKIYMSRGGVGCFERTMIVGILVIGVCVN 385
Query: 626 V 628
V
Sbjct: 386 V 386
>11_06_0421 +
23331702-23331723,23332161-23332197,23333397-23333533,
23333675-23334241,23335068-23335777,23335915-23336102,
23336489-23336918
Length = 696
Score = 31.5 bits (68), Expect = 0.58
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +2
Query: 398 NDDXVSXVATALPLAAICGIPFFSYASXRF-GRKLCVIXVSLLSCVSWTIKLTSINTPSL 574
N + + A+ + I FS + + GR+ +I SLL + + S N L
Sbjct: 79 NGPSIDGIILAVSVFGSIAITVFSGSLLDWLGRRAALIYSSLLLISGGLLMVWSPNIYIL 138
Query: 575 IAARVIAGIASGGCFVAVPV 634
+ AR+I G SG F VP+
Sbjct: 139 LLARLIVGSGSGLVFTCVPI 158
>03_02_0023 + 5065962-5066079,5066179-5067614
Length = 517
Score = 30.7 bits (66), Expect = 1.0
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Frame = +2
Query: 272 NKQIF-TALLATIPTFTYGIQIGWLSPLGPVLKSKQSPADTPLNDDXVSXVATALPLAAI 448
NK F ALLA++ + G I +S G + K+ D + D + +A + + ++
Sbjct: 20 NKYAFGCALLASMNSVLLGYDISVMS--GAQIFMKE---DLKITDTQIEILAGVINIYSL 74
Query: 449 CGIPFFSYASXRFGRKLCVIXVSLLSCVSWTIKLTSINTPSLIAARVIAGIASGGCFVAV 628
G S GR+ ++ + + + + N L+A R +AGI G +
Sbjct: 75 FGSLAAGMTSDWLGRRYTMVLAAAIFFTGALLMGLAPNYAFLMAGRFVAGIGVGYALMIA 134
Query: 629 PV 634
PV
Sbjct: 135 PV 136
>01_05_0509 + 22811184-22812038,22813493-22814020
Length = 460
Score = 30.7 bits (66), Expect = 1.0
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 8/143 (5%)
Frame = +2
Query: 224 LIISMDGKRQKNESNANKQIFT--ALLATI--PTFTYGIQIGWLSPLGPVLKSKQSPA-D 388
LI D + Q S +++T A+L T+ P Y + I P+ ++ K S D
Sbjct: 307 LIYGEDVQAQVTLSLPTGKLYTRIAILTTLITPLAKYALVI---QPVTIAIEEKLSATTD 363
Query: 389 TPLNDDXVSXVATALPLAAI---CGIPFFSYASXRFGRKLCVIXVSLLSCVSWTIKLTSI 559
+N +TA+ ++ + C +PFF Y G L V L C+S+ S
Sbjct: 364 AEINRLTRVLTSTAVVISTVVLACTVPFFGYLISFIGSSLNVTVAVLFPCLSYLKIYMSR 423
Query: 560 NTPSLIAARVIAGIASGGCFVAV 628
I GI G VA+
Sbjct: 424 GGVGCFEMAAIIGILVIGVCVAI 446
>02_04_0324 + 22032748-22032895,22035274-22035593,22035709-22036797
Length = 518
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 488 GRKLCVIXVSLLSCVSWTIKLTSINTPSLIAARVIAGIASGGCFVAVPV 634
GR+ ++ +L + L ++N LI R++ G+A G +A PV
Sbjct: 112 GRRNSLLIAGVLFFAGTLLNLAAVNISMLIIGRILLGVAVGFSSLAAPV 160
>01_05_0586 + 23443371-23444645
Length = 424
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 410 VSXVATALPLAAICGIPFFSYASXRFGRKLCVIXVSLLSCVSW--TIKLTSINTPSLIAA 583
+S A + +PFF Y G L V+ L C+ + K I+ ++A
Sbjct: 339 ISTAILASTVVVASTVPFFGYLMSFIGSFLSVMATVLFPCLCYLKIYKADGIHRTEMVA- 397
Query: 584 RVIAGIASGGCFVAV 628
IAGI G FVAV
Sbjct: 398 --IAGILLLGVFVAV 410
>12_02_0509 - 19829360-19830400,19831475-19831821,19831920-19832073
Length = 513
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/115 (20%), Positives = 48/115 (41%)
Frame = +2
Query: 290 ALLATIPTFTYGIQIGWLSPLGPVLKSKQSPADTPLNDDXVSXVATALPLAAICGIPFFS 469
A+ A++ + YG G +S K D ++D + + A + ++ G
Sbjct: 39 AVAASLTSIIYGYNRGVMSGA-----QKFVQLDLGVSDAEIEVLIGATSIYSLVGSLAAG 93
Query: 470 YASXRFGRKLCVIXVSLLSCVSWTIKLTSINTPSLIAARVIAGIASGGCFVAVPV 634
+A R GR+ + + + + +L+A +++AG+A G V PV
Sbjct: 94 WACDRAGRRRTIALSAAMFLAGSAATAAASGYAALMAGQLVAGVACGFGLVVAPV 148
>03_05_0199 -
21893051-21893509,21893835-21894482,21894566-21894888,
21895978-21896116
Length = 522
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/79 (22%), Positives = 34/79 (43%)
Frame = +2
Query: 398 NDDXVSXVATALPLAAICGIPFFSYASXRFGRKLCVIXVSLLSCVSWTIKLTSINTPSLI 577
N ++ ++L LAA+ F + + GRK + + T+ + N LI
Sbjct: 80 NSQPLTAFTSSLYLAALVASFFVASFTRALGRKWSMFGGGVSFLAGATLNGAARNVAMLI 139
Query: 578 AARVIAGIASGGCFVAVPV 634
R++ GI C ++ P+
Sbjct: 140 VGRILLGIGVAFCGLSTPI 158
>11_02_0047 +
7716315-7716420,7716518-7716647,7716785-7716856,
7717007-7717078,7717274-7717345,7717684-7717845,
7718105-7718176,7718435-7718503,7718788-7718859,
7718992-7719129,7719386-7719888,7720007-7720171,
7720267-7720403,7720488-7720707,7720793-7721028,
7721165-7721632
Length = 897
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +2
Query: 524 SCVSWTIKLTSINTPSLIAARV 589
S SW IK TSI+TP L ARV
Sbjct: 543 SYASWDIKSTSISTPHLQGARV 564
>01_05_0504 + 22781737-22781799,22782033-22782287,22783652-22784077
Length = 247
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = +2
Query: 281 IFTALLATIPTFTYGIQIGWLSPLGPVLKSKQSPADTPLNDDXVSXV--ATALPLAAI-- 448
I T L++ + YG++I ++ + S + A T ++ + V +TA+ ++ +
Sbjct: 153 ILTTLISLLEK--YGLEIQLIATVIKEKLSLTTAAATDAENNRQTRVLTSTAVVVSTVVL 210
Query: 449 -CGIPFFSYASXRFGRKLCVIXVSLLSCVSW 538
C +PFFSY G L V L C+S+
Sbjct: 211 ACTVPFFSYLMSFNGSSLNVTIAVLFPCLSY 241
>11_04_0293 + 15926561-15928834
Length = 757
Score = 28.7 bits (61), Expect = 4.1
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 410 VSXVATALPLAAICGIPFFSY-ASXRFGRKLCVIXVSLLSCVSWTIKLTSINTPSLIAAR 586
V + A+ L I FS S GR+ +I SLL I L S N L+ AR
Sbjct: 44 VEGLVVAMSLIGATIITTFSGPVSDLVGRRPMLIASSLLYFAGGLIMLWSPNVYVLLLAR 103
Query: 587 VIAGIASGGCFVAVPV 634
++ G G VPV
Sbjct: 104 LVDGFGVGLAVTLVPV 119
>11_03_0157 + 10897769-10898066,10898308-10899461
Length = 483
Score = 28.3 bits (60), Expect = 5.4
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Frame = +2
Query: 290 ALLATI--PTFTYGIQIG-WLSPLGPVLKSKQSPADTPLNDDXVSXVATALPLAAICGIP 460
AL AT+ P Y ++ + L L + SP L V A L LA +P
Sbjct: 350 ALWATVLTPVTKYALEFAPFAIQLERHLPAAMSPRARTLVRGGVGSAALLLILALALSVP 409
Query: 461 FFSYASXRFGRKLCVIXVSLLSCVSW-TIKLTSINTP--SLIAARVIAGI 601
+F Y G + V + C + I+ ++ P +L AA + AG+
Sbjct: 410 YFQYVLSLTGSLVSVAISIIFPCAFYLKIRWGRVSRPAVALNAAMIAAGV 459
>07_01_0044 - 348439-349539,351979-352301,352418-352550
Length = 518
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +2
Query: 425 TALPLAAICGIPFFSYASXRFGRKLCVIXVSLLSCVSWTIKLTSINTPSLIAARVIAGIA 604
++L LAA+ F + + GRK + L + + + N LI R++ G+
Sbjct: 87 SSLYLAALVSSFFAATVTRVLGRKWSMFAGGLTFLIGAALNGAAENVAMLIVGRILLGVG 146
Query: 605 SGGCFVAVPV 634
G +VPV
Sbjct: 147 VGFANQSVPV 156
>06_01_0667 +
4878784-4878900,4879016-4879118,4879256-4879341,
4879434-4879496,4879589-4879831,4880639-4880728,
4881403-4881600
Length = 299
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 319 VWHPDRLVVSPGARAEVKTVSSGHAPQR*XGLXGGHSPTSRRYMWD 456
+WHPDR V+ G+ + + Q G S +++R+++D
Sbjct: 40 IWHPDRCSVAGGSASAAGVDEAKERFQEIQGAYSVLSDSNKRFLYD 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,497,022
Number of Sequences: 37544
Number of extensions: 329113
Number of successful extensions: 865
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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