Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16b01
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 34 0.066
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 34 0.066
U29614-5|AAA68810.2| 240|Caenorhabditis elegans Hypothetical pr... 31 0.47
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 30 1.1
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 30 1.4
U97196-11|AAB52464.1| 273|Caenorhabditis elegans Hypothetical p... 29 1.9
U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical p... 29 2.5
U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical p... 29 2.5
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 29 3.3
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 29 3.3
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 28 4.4
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 28 4.4
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 4.4
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 4.4
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 4.4
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 4.4
Z81581-14|CAH10785.1| 628|Caenorhabditis elegans Hypothetical p... 28 5.8
Z81581-12|CAB70244.3| 635|Caenorhabditis elegans Hypothetical p... 28 5.8
Z81581-2|CAD56595.1| 672|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81581-1|CAD56594.1| 655|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical pr... 28 5.8
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 28 5.8
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 28 5.8
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 28 5.8
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 28 5.8
AF039047-2|ABR92603.1| 403|Caenorhabditis elegans Serpentine re... 27 7.6
AF039047-1|AAB94224.2| 403|Caenorhabditis elegans Serpentine re... 27 7.6
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 34.3 bits (75), Expect = 0.066
Identities = 26/118 (22%), Positives = 52/118 (44%)
Frame = +3
Query: 237 ADDGNSVMSLTNKRTHDEMCNEPENLALSTTDLNPAKKIKETPENMTTNEKPSDHSSNTG 416
A+ S +L K+T ++ P+ +T +PA+K +E + +EK +
Sbjct: 13667 AETLESDFNLVEKKTVQKVEQSPDESTSATIKRDPAQKTEEISKQDDGDEKKTTTDGKPP 13726
Query: 417 EMDLEDLIAPSTVIKTGMKPSDFENASKQTSDALSNISADREVKSPSKIPQDEREIND 590
+ + + V+K + SD + +D +S +S D E K K+ + + E +D
Sbjct: 13727 KPEDSEATPKKRVVKKKTQKSDSVASDASLAD-VSKLSDDVEEKPKKKVLKKKTEKSD 13783
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 34.3 bits (75), Expect = 0.066
Identities = 26/118 (22%), Positives = 52/118 (44%)
Frame = +3
Query: 237 ADDGNSVMSLTNKRTHDEMCNEPENLALSTTDLNPAKKIKETPENMTTNEKPSDHSSNTG 416
A+ S +L K+T ++ P+ +T +PA+K +E + +EK +
Sbjct: 13667 AETLESDFNLVEKKTVQKVEQSPDESTSATIKRDPAQKTEEISKQDDGDEKKTTTDGKPP 13726
Query: 417 EMDLEDLIAPSTVIKTGMKPSDFENASKQTSDALSNISADREVKSPSKIPQDEREIND 590
+ + + V+K + SD + +D +S +S D E K K+ + + E +D
Sbjct: 13727 KPEDSEATPKKRVVKKKTQKSDSVASDASLAD-VSKLSDDVEEKPKKKVLKKKTEKSD 13783
>U29614-5|AAA68810.2| 240|Caenorhabditis elegans Hypothetical
protein F18E9.4 protein.
Length = 240
Score = 31.5 bits (68), Expect = 0.47
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +3
Query: 279 THDEMCNEPENLALSTTD-LNPAKKIKETPENMTTNEKPSDHSSNTGEMDLEDLIAPS-T 452
TH E+ N+ E + +T D L + + P++ N T ++ E +I S T
Sbjct: 46 THQEIKNDKEYTSTTTHDPLEISHSKRFLPQSGIENLVHPPLGGETPSVNEEPIITMSMT 105
Query: 453 VIKTGMKPSDFENASKQTSDALSNISADREVKSPSKIP 566
I++ +P + ++SDA+ +SA E +++P
Sbjct: 106 PIQSLSQPEEISAEFSKSSDAILEVSATTEKVRTTRVP 143
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 30.3 bits (65), Expect = 1.1
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Frame = +3
Query: 183 VYDKINKIPSEYLPRSXTADDGNSVMSLTNKRTHDEMCNEPENLALSTTDLNP--AKKIK 356
+YD IP +Y +DDG++V+ + T N L P K
Sbjct: 207 LYDNPAYIPGQYDDMKECSDDGSNVICKYDPNT----LNIGAKYEWKKCGLVPETTKPTT 262
Query: 357 ETPENMTTNEKPSDHSSNTGEMDLEDLIAPSTVIKT 464
TP TT PS SS T ++ +TV T
Sbjct: 263 TTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTST 298
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.4
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +3
Query: 270 NKRTHDEMCNEPENLALSTTDLNPAKKIKETPENMTTNEKPSDHSSNTGEMDLEDLIAPS 449
N++ D + N+A +L K+ K+T E + + S + ++ED PS
Sbjct: 365 NQKIEDFIQTSNVNIASQVLELY-FKRRKQTMEGVLPERMKTPRESRLVKNEVEDAPTPS 423
Query: 450 TVIKTGM-KPSDFENASKQTSDALSNISADREVKSPSKIPQDEREIND 590
+I+ M + + ++ ++ S+ S R V +P +I Q+ + D
Sbjct: 424 EIIRRAMEEATSWDPPENMATEEGSDPSPPR-VYTPMEIEQESPALED 470
Score = 29.9 bits (64), Expect = 1.4
Identities = 25/111 (22%), Positives = 46/111 (41%)
Frame = +3
Query: 204 IPSEYLPRSXTADDGNSVMSLTNKRTHDEMCNEPENLALSTTDLNPAKKIKETPENMTTN 383
IP + P ++ S ++ T +E + + ST+DL + ++P +
Sbjct: 489 IPMDTAPAPPASESARSSPAM-EPATEEETSGSSDP-SPSTSDLCSSMHACDSPATPESE 546
Query: 384 EKPSDHSSNTGEMDLEDLIAPSTVIKTGMKPSDFENASKQTSDALSNISAD 536
+ S+ S + L +A +TG P + S TSD S++ AD
Sbjct: 547 NRVSEERSESSR-SLPPTVAVCPATETGEDPHASSDPSPSTSDLRSSMDAD 596
>U97196-11|AAB52464.1| 273|Caenorhabditis elegans Hypothetical
protein B0207.11 protein.
Length = 273
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 249 NSVMSLTNKRTHDEMCNEPENLALSTTDLNPAKKIKETPENMTTNEKPSDHSSNT 413
N +L NK+T+DE+ ++ T +LN K +E + + EKP S NT
Sbjct: 16 NIYAALNNKKTNDEVASKV------TEELNKLKIAEEKDNKIVSREKPEMMSLNT 64
>U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical
protein F46F11.1b protein.
Length = 1225
Score = 29.1 bits (62), Expect = 2.5
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 267 TNKRTHDEMCNEPENLALSTTDLNPAKKIKETPENMTTNEKPSDHSSNTG--EMDLEDLI 440
T R H E+ P L L ++I ET N++TN KP+ S ++G D D
Sbjct: 903 TGPRFHIEILFSP---GLYPCFLTEKERIYETRFNLSTNPKPATSSRSSGRESRDTNDSA 959
Query: 441 APSTVIKTGMKPSDFENASKQTSDALSNISADRE 542
+ ST G +PS + + T LS S +
Sbjct: 960 SSST---EGRRPSIEKVVTVVTPTQLSTPSVTND 990
>U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical
protein F46F11.1a protein.
Length = 1339
Score = 29.1 bits (62), Expect = 2.5
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 267 TNKRTHDEMCNEPENLALSTTDLNPAKKIKETPENMTTNEKPSDHSSNTG--EMDLEDLI 440
T R H E+ P L L ++I ET N++TN KP+ S ++G D D
Sbjct: 903 TGPRFHIEILFSP---GLYPCFLTEKERIYETRFNLSTNPKPATSSRSSGRESRDTNDSA 959
Query: 441 APSTVIKTGMKPSDFENASKQTSDALSNISADRE 542
+ ST G +PS + + T LS S +
Sbjct: 960 SSST---EGRRPSIEKVVTVVTPTQLSTPSVTND 990
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical
protein T21E8.3 protein.
Length = 1243
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 372 MTTNEKPSDHSSNTGEMDLEDLIAPSTVIKTGMKPSDFENASKQTSD 512
M +NEK S H SN G + + L + TVI + + E S + +
Sbjct: 222 MKSNEKQSMHYSNAGAIAFQALCSFKTVISLNGQTQELEKYSAELKE 268
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical
protein T21E8.3 protein.
Length = 1243
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 372 MTTNEKPSDHSSNTGEMDLEDLIAPSTVIKTGMKPSDFENASKQTSD 512
M +NEK S H SN G + + L + TVI + + E S + +
Sbjct: 222 MKSNEKQSMHYSNAGAIAFQALCSFKTVISLNGQTQELEKYSAELKE 268
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 28.7 bits (61), Expect = 3.3
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +3
Query: 207 PSEYLPRSXTADDGNSVMSLTNKRTHDEMCNEPENLALSTTDLNPAKKIKETPENMTTNE 386
P LPRS A+ NSV SL T M P++ + +T +P T +
Sbjct: 1271 PPPLLPRSSRANQSNSV-SLP-PTTQAPMPPAPKSSGMMSTATSPTTLTTTTTPSSAGGP 1328
Query: 387 KPSDHSSNTGEMDLEDLI-APSTVIKTGMKPSDFE 488
P H + + L +P T + PS F+
Sbjct: 1329 PPKLHPRRMTQQPMSPLAKSPLTPSRDNSSPSAFQ 1363
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 28.7 bits (61), Expect = 3.3
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +3
Query: 207 PSEYLPRSXTADDGNSVMSLTNKRTHDEMCNEPENLALSTTDLNPAKKIKETPENMTTNE 386
P LPRS A+ NSV SL T M P++ + +T +P T +
Sbjct: 1271 PPPLLPRSSRANQSNSV-SLP-PTTQAPMPPAPKSSGMMSTATSPTTLTTTTTPSSAGGP 1328
Query: 387 KPSDHSSNTGEMDLEDLI-APSTVIKTGMKPSDFE 488
P H + + L +P T + PS F+
Sbjct: 1329 PPKLHPRRMTQQPMSPLAKSPLTPSRDNSSPSAFQ 1363
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/97 (23%), Positives = 42/97 (43%)
Frame = +3
Query: 303 PENLALSTTDLNPAKKIKETPENMTTNEKPSDHSSNTGEMDLEDLIAPSTVIKTGMKPSD 482
P+ T +K T T +E +N ++++E A S+ +KT KP+
Sbjct: 338 PKTPTTPKTSKGRSKSPANTTAYFTADESLELLGNNMEKLNIESKSAKSSKLKTPSKPT- 396
Query: 483 FENASKQTSDALSNISADREVKSPSKIPQDEREINDV 593
S TS + + + EV +P+ + D+ EI +
Sbjct: 397 ---TSSSTSFSSAEDDKEAEVSTPTTV--DDGEIRKI 428
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/97 (23%), Positives = 42/97 (43%)
Frame = +3
Query: 303 PENLALSTTDLNPAKKIKETPENMTTNEKPSDHSSNTGEMDLEDLIAPSTVIKTGMKPSD 482
P+ T +K T T +E +N ++++E A S+ +KT KP+
Sbjct: 338 PKTPTTPKTSKGRSKSPANTTAYFTADESLELLGNNMEKLNIESKSAKSSKLKTPSKPT- 396
Query: 483 FENASKQTSDALSNISADREVKSPSKIPQDEREINDV 593
S TS + + + EV +P+ + D+ EI +
Sbjct: 397 ---TSSSTSFSSAEDDKEAEVSTPTTV--DDGEIRKI 428
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical
protein W06A7.3f protein.
Length = 2488
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +3
Query: 300 EPENLALSTTDLNPAKKIKETPENMTTNEKPSDHSSNTGEMDLEDLIAPSTVIKTGMKPS 479
E N A+S D +IK+ EN+ D++ E ED P TV +T K S
Sbjct: 718 EKRNEAVSPND--ETSEIKQDLENLENGASGPDNNVQVDEAAQEDPTDPETVDETTSKIS 775
Query: 480 DFENASKQTSD 512
+ + T D
Sbjct: 776 ENMPKAPDTED 786
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical
protein W06A7.3c protein.
Length = 2484
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +3
Query: 300 EPENLALSTTDLNPAKKIKETPENMTTNEKPSDHSSNTGEMDLEDLIAPSTVIKTGMKPS 479
E N A+S D +IK+ EN+ D++ E ED P TV +T K S
Sbjct: 718 EKRNEAVSPND--ETSEIKQDLENLENGASGPDNNVQVDEAAQEDPTDPETVDETTSKIS 775
Query: 480 DFENASKQTSD 512
+ + T D
Sbjct: 776 ENMPKAPDTED 786
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical
protein W06A7.3a protein.
Length = 2607
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +3
Query: 300 EPENLALSTTDLNPAKKIKETPENMTTNEKPSDHSSNTGEMDLEDLIAPSTVIKTGMKPS 479
E N A+S D +IK+ EN+ D++ E ED P TV +T K S
Sbjct: 718 EKRNEAVSPND--ETSEIKQDLENLENGASGPDNNVQVDEAAQEDPTDPETVDETTSKIS 775
Query: 480 DFENASKQTSD 512
+ + T D
Sbjct: 776 ENMPKAPDTED 786
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/82 (24%), Positives = 41/82 (50%)
Frame = +3
Query: 345 KKIKETPENMTTNEKPSDHSSNTGEMDLEDLIAPSTVIKTGMKPSDFENASKQTSDALSN 524
+K +E P++ T EK + S+ E++ +P+ K+ K ++ + S ++
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSA------AEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPV 1781
Query: 525 ISADREVKSPSKIPQDEREIND 590
AD EVKSP+K + ++ +
Sbjct: 1782 KMADDEVKSPTKKEKSPEKVEE 1803
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/82 (24%), Positives = 41/82 (50%)
Frame = +3
Query: 345 KKIKETPENMTTNEKPSDHSSNTGEMDLEDLIAPSTVIKTGMKPSDFENASKQTSDALSN 524
+K +E P++ T EK + S+ E++ +P+ K+ K ++ + S ++
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSA------AEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPV 1781
Query: 525 ISADREVKSPSKIPQDEREIND 590
AD EVKSP+K + ++ +
Sbjct: 1782 KMADDEVKSPTKKEKSPEKVEE 1803
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/82 (24%), Positives = 41/82 (50%)
Frame = +3
Query: 345 KKIKETPENMTTNEKPSDHSSNTGEMDLEDLIAPSTVIKTGMKPSDFENASKQTSDALSN 524
+K +E P++ T EK + S+ E++ +P+ K+ K ++ + S ++
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSA------AEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPV 1781
Query: 525 ISADREVKSPSKIPQDEREIND 590
AD EVKSP+K + ++ +
Sbjct: 1782 KMADDEVKSPTKKEKSPEKVEE 1803
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/82 (24%), Positives = 41/82 (50%)
Frame = +3
Query: 345 KKIKETPENMTTNEKPSDHSSNTGEMDLEDLIAPSTVIKTGMKPSDFENASKQTSDALSN 524
+K +E P++ T EK + S+ E++ +P+ K+ K ++ + S ++
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSA------AEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPV 1781
Query: 525 ISADREVKSPSKIPQDEREIND 590
AD EVKSP+K + ++ +
Sbjct: 1782 KMADDEVKSPTKKEKSPEKVEE 1803
>Z81581-14|CAH10785.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = -1
Query: 463 VLITVEGAIKSSRSISPVFEL*SDGFSFVVIFSGVSLIFXAGFKSVVDSAKFSGSLHISS 284
+L+ +E ++++ I P L S F +IF+ +L+ G+ V++ F +
Sbjct: 230 ILMIIENELRTAYVIRPGSSL-SHLLKFFIIFTTTALLSFVGYFHVIEIQLFMNANAADD 288
Query: 283 WVLLL 269
W++ L
Sbjct: 289 WMVAL 293
>Z81581-12|CAB70244.3| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = -1
Query: 463 VLITVEGAIKSSRSISPVFEL*SDGFSFVVIFSGVSLIFXAGFKSVVDSAKFSGSLHISS 284
+L+ +E ++++ I P L S F +IF+ +L+ G+ V++ F +
Sbjct: 237 ILMIIENELRTAYVIRPGSSL-SHLLKFFIIFTTTALLSFVGYFHVIEIQLFMNANAADD 295
Query: 283 WVLLL 269
W++ L
Sbjct: 296 WMVAL 300
>Z81581-2|CAD56595.1| 672|Caenorhabditis elegans Hypothetical
protein F08A10.1c protein.
Length = 672
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = -1
Query: 463 VLITVEGAIKSSRSISPVFEL*SDGFSFVVIFSGVSLIFXAGFKSVVDSAKFSGSLHISS 284
+L+ +E ++++ I P L S F +IF+ +L+ G+ V++ F +
Sbjct: 257 ILMIIENELRTAYVIRPGSSL-SHLLKFFIIFTTTALLSFVGYFHVIEIQLFMNANAADD 315
Query: 283 WVLLL 269
W++ L
Sbjct: 316 WMVAL 320
>Z81581-1|CAD56594.1| 655|Caenorhabditis elegans Hypothetical
protein F08A10.1b protein.
Length = 655
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = -1
Query: 463 VLITVEGAIKSSRSISPVFEL*SDGFSFVVIFSGVSLIFXAGFKSVVDSAKFSGSLHISS 284
+L+ +E ++++ I P L S F +IF+ +L+ G+ V++ F +
Sbjct: 257 ILMIIENELRTAYVIRPGSSL-SHLLKFFIIFTTTALLSFVGYFHVIEIQLFMNANAADD 315
Query: 283 WVLLL 269
W++ L
Sbjct: 316 WMVAL 320
>Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = -1
Query: 463 VLITVEGAIKSSRSISPVFEL*SDGFSFVVIFSGVSLIFXAGFKSVVDSAKFSGSLHISS 284
+L+ +E ++++ I P L S F +IF+ +L+ G+ V++ F +
Sbjct: 230 ILMIIENELRTAYVIRPGSSL-SHLLKFFIIFTTTALLSFVGYFHVIEIQLFMNANAADD 288
Query: 283 WVLLL 269
W++ L
Sbjct: 289 WMVAL 293
>Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = -1
Query: 463 VLITVEGAIKSSRSISPVFEL*SDGFSFVVIFSGVSLIFXAGFKSVVDSAKFSGSLHISS 284
+L+ +E ++++ I P L S F +IF+ +L+ G+ V++ F +
Sbjct: 237 ILMIIENELRTAYVIRPGSSL-SHLLKFFIIFTTTALLSFVGYFHVIEIQLFMNANAADD 295
Query: 283 WVLLL 269
W++ L
Sbjct: 296 WMVAL 300
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 336 NPAKKIKETPENMTTNEKPSDHS 404
NP KK+K+ TT+E+P D S
Sbjct: 1351 NPGKKVKDFVIQYTTDEEPDDES 1373
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 336 NPAKKIKETPENMTTNEKPSDHS 404
NP KK+K+ TT+E+P D S
Sbjct: 1414 NPGKKVKDFVIQYTTDEEPDDES 1436
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 336 NPAKKIKETPENMTTNEKPSDHS 404
NP KK+K+ TT+E+P D S
Sbjct: 1414 NPGKKVKDFVIQYTTDEEPDDES 1436
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/84 (21%), Positives = 32/84 (38%)
Frame = +3
Query: 258 MSLTNKRTHDEMCNEPENLALSTTDLNPAKKIKETPENMTTNEKPSDHSSNTGEMDLEDL 437
M + R+ DE N + S + +NP P PS+ S+ + +
Sbjct: 415 MVMNRNRSSDESPNGRLSSPTSISTVNPMSASMFVPATAKEISIPSNSSATSSPFKSSSI 474
Query: 438 IAPSTVIKTGMKPSDFENASKQTS 509
PS+ K ++P + + TS
Sbjct: 475 APPSSASKPALRPIPSNSLADGTS 498
>AF039047-2|ABR92603.1| 403|Caenorhabditis elegans Serpentine
receptor, class r protein4, isoform b protein.
Length = 403
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 429 EDLIAPSTVIKTGMKPSDFENASKQTSDALSNISADREVKSPSKI 563
+ ++A S ++ M+ DFENA Q + DR +KS ++I
Sbjct: 319 DQIVATSKIL---MESEDFENAENQKVYQTYRLMVDRSLKSETRI 360
>AF039047-1|AAB94224.2| 403|Caenorhabditis elegans Serpentine
receptor, class r protein4, isoform a protein.
Length = 403
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 429 EDLIAPSTVIKTGMKPSDFENASKQTSDALSNISADREVKSPSKI 563
+ ++A S ++ M+ DFENA Q + DR +KS ++I
Sbjct: 319 DQIVATSKIL---MESEDFENAENQKVYQTYRLMVDRSLKSETRI 360
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,066,163
Number of Sequences: 27780
Number of extensions: 240546
Number of successful extensions: 846
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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