Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16b01
(595 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 26 0.24
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 26 0.24
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 26 0.24
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 26 0.24
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 24 0.98
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 24 0.98
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 24 0.98
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.98
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 3.0
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 22 3.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 3.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 3.9
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 5.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 6.9
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 21 9.1
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.24
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 276 RTHDEMCNEPENLALSTTDLNPAKKIKETPENMTTNEK 389
R ++++CNE E L T + +E +N NE+
Sbjct: 17 RQYEKLCNEEEKLLEERTSRKRYSRSREREQNSYKNER 54
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.24
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 276 RTHDEMCNEPENLALSTTDLNPAKKIKETPENMTTNEK 389
R ++++CNE E L T + +E +N NE+
Sbjct: 17 RQYEKLCNEEEKLLEERTSRKRYSRSREREQNSYKNER 54
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.24
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 276 RTHDEMCNEPENLALSTTDLNPAKKIKETPENMTTNEK 389
R ++++CNE E L T + +E +N NE+
Sbjct: 17 RQYEKLCNEEEKLLEERTSRKRYSRSREREQNSYKNER 54
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.24
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 276 RTHDEMCNEPENLALSTTDLNPAKKIKETPENMTTNEK 389
R ++++CNE E L T + +E +N NE+
Sbjct: 17 RQYEKLCNEEEKLLEERTSRKRYSRSREREQNSYKNER 54
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.2 bits (50), Expect = 0.98
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 61 KETKKTLTSVKCCWNKW 111
K+ K L SV WNKW
Sbjct: 683 KDEAKDLVSVNKSWNKW 699
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.2 bits (50), Expect = 0.98
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 61 KETKKTLTSVKCCWNKW 111
K+ K L SV WNKW
Sbjct: 683 KDEAKDLVSVNKSWNKW 699
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.2 bits (50), Expect = 0.98
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 61 KETKKTLTSVKCCWNKW 111
K+ K L SV WNKW
Sbjct: 683 KDEAKDLVSVNKSWNKW 699
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.98
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +1
Query: 16 LRYHQNLQQFKK--NYLKETKKTLTSV 90
+ ++ N Q +K NYLK KTLTS+
Sbjct: 306 VNFYPNNQDIEKFLNYLKRGGKTLTSI 332
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.6 bits (46), Expect = 3.0
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3
Query: 267 TNKRTHDEMCNEPENLALSTTDLN 338
+N +TH ++C P + L + +N
Sbjct: 373 SNGQTHSQLCPTPRSTHLKVSGIN 396
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 22.2 bits (45), Expect = 3.9
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 495 SKQTSDALSNISADREVKSPSKIPQDEREI 584
+ TS S+ ++DR SPS DE ++
Sbjct: 181 ASSTSSTASSRNSDRSAGSPSVSESDEVDV 210
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 3.9
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -1
Query: 385 SFVVIFSGVSLIFXAGFKSVVDSAK---FSGSLHISSWVL-LLVNDITEFPSSAVXLLGK 218
+ ++ G+S + F DS + S S+ IS V LLV +I S V LLGK
Sbjct: 250 NIIIPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGK 309
Query: 217 YSEGILLILS 188
Y ++++S
Sbjct: 310 YLIFAMILVS 319
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 3.9
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -1
Query: 385 SFVVIFSGVSLIFXAGFKSVVDSAK---FSGSLHISSWVL-LLVNDITEFPSSAVXLLGK 218
+ ++ G+S + F DS + S S+ IS V LLV +I S V LLGK
Sbjct: 250 NIIIPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGK 309
Query: 217 YSEGILLILS 188
Y ++++S
Sbjct: 310 YLIFAMILVS 319
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.8 bits (44), Expect = 5.2
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 237 ADDG-NSVMSLTNKRTHDEMCNEPENLALSTTD 332
ADD + + S T D+M ++ ENL L D
Sbjct: 217 ADDSFHRLSSHTLNHNSDKMSDQQENLTLKEVD 249
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +3
Query: 297 NEPENLALSTTDLNPAKKIKETPENMTTNEKPSDHSSN 410
++ N+ S LN + + + +EKP D SSN
Sbjct: 234 HQNSNVPKSVAGLNVSSRRSDMNGTTPLDEKPLDVSSN 271
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 198 NKIPSEYLPRSXTADDGNSVMSL 266
N + + LP+ DD SVM L
Sbjct: 69 NNVTMQLLPKLMEFDDWTSVMEL 91
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,963
Number of Sequences: 438
Number of extensions: 2871
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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