BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16a23
(607 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein ... 66 2e-13
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 25 0.58
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 25 0.58
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 25 0.58
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 25 0.58
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 25 0.58
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 25 0.58
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 25 0.58
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 25 0.58
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 25 0.58
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 25 0.58
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 2.3
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 3.1
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 3.1
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 3.1
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 22 4.1
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 4.1
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 4.1
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 4.1
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 4.1
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 4.1
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 4.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 7.1
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 21 7.1
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 21 7.1
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 7.1
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 7.1
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 21 9.4
>AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein
protein.
Length = 87
Score = 66.5 bits (155), Expect = 2e-13
Identities = 28/42 (66%), Positives = 33/42 (78%)
Frame = +2
Query: 302 SAAARDPRANPGPVLFPPSPAGDPSQTSGVVVGASGYGFVPP 427
+ A RDPR+N GPVLFPP P + +SGV+VGASGYGFVPP
Sbjct: 36 AVAMRDPRSNRGPVLFPPGPPPNNEDSSGVIVGASGYGFVPP 77
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 603 NSTCKQKNKYKHCNSSLARNYNY 535
N T ++K+K SSL+ NYNY
Sbjct: 69 NRTEREKSKEPKIISSLSNNYNY 91
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 603 NSTCKQKNKYKHCNSSLARNYNY 535
N T ++K+K SSL+ NYNY
Sbjct: 69 NRTEREKSKEPKIISSLSNNYNY 91
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 603 NSTCKQKNKYKHCNSSLARNYNY 535
N T ++K+K SSL+ NYNY
Sbjct: 69 NRTEREKSKEPKIISSLSNNYNY 91
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 603 NSTCKQKNKYKHCNSSLARNYNY 535
N T ++K+K SSL+ NYNY
Sbjct: 69 NRTEREKSKEPKIISSLSNNYNY 91
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 603 NSTCKQKNKYKHCNSSLARNYNY 535
N T ++K+K SSL+ NYNY
Sbjct: 302 NRTEREKSKEPKIISSLSNNYNY 324
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 603 NSTCKQKNKYKHCNSSLARNYNY 535
N T ++K+K SSL+ NYNY
Sbjct: 302 NRTEREKSKEPKIISSLSNNYNY 324
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 603 NSTCKQKNKYKHCNSSLARNYNY 535
N T ++K+K SSL+ NYNY
Sbjct: 302 NRTEREKSKEPKIISSLSNNYNY 324
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 603 NSTCKQKNKYKHCNSSLARNYNY 535
N T ++K+K SSL+ NYNY
Sbjct: 302 NRTEREKSKEPKIISSLSNNYNY 324
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 603 NSTCKQKNKYKHCNSSLARNYNY 535
N T ++K+K SSL+ NYNY
Sbjct: 302 NRTEREKSKEPKIISSLSNNYNY 324
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 603 NSTCKQKNKYKHCNSSLARNYNY 535
N T ++K+K SSL+ NYNY
Sbjct: 291 NRTEREKSKEPKIISSLSNNYNY 313
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 597 TCKQKNKYKHCNSSLARNYNY 535
T ++++K + SSL+ NYNY
Sbjct: 304 TERERSKERKIISSLSNNYNY 324
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 591 KQKNKYKHCNSSLARNYNY 535
++K+K SSL+ NYNY
Sbjct: 73 REKSKEHKIISSLSNNYNY 91
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 591 KQKNKYKHCNSSLARNYNY 535
++K+K SSL+ NYNY
Sbjct: 73 REKSKEHKIISSLSNNYNY 91
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 591 KQKNKYKHCNSSLARNYNY 535
++K+K SSL+ NYNY
Sbjct: 73 REKSKEHKIISSLSNNYNY 91
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 421 HEPISGSTDHHSACLRGVTGRRGGKQHRTRIRPRISG 311
H+PI+ + A +G+ + GG+Q R+ I+G
Sbjct: 49 HKPITLTIPVPQAANKGMINQYGGEQPTLRLLCSIAG 85
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 597 TCKQKNKYKHCNSSLARNYNYFCIKKNS 514
T ++++K SSL+ NYNY N+
Sbjct: 71 TERERSKEPKIISSLSNNYNYSNYNNNN 98
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 597 TCKQKNKYKHCNSSLARNYNYFCIKKNS 514
T ++++K SSL+ NYNY N+
Sbjct: 71 TERERSKEPKIISSLSNNYNYSNYNNNN 98
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 597 TCKQKNKYKHCNSSLARNYNYFCIKKNS 514
T ++++K SSL+ NYNY N+
Sbjct: 71 TERERSKEPKIISSLSNNYNYSNYNNNN 98
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 597 TCKQKNKYKHCNSSLARNYNYFCIKKNS 514
T ++++K SSL+ NYNY N+
Sbjct: 71 TERERSKEPKIISSLSNNYNYSNYNNNN 98
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 597 TCKQKNKYKHCNSSLARNYNYFCIKKNS 514
T ++++K SSL+ NYNY N+
Sbjct: 71 TERERSKEPKIISSLSNNYNYSNYNNNN 98
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 597 TCKQKNKYKHCNSSLARNYNYFCIKKNS 514
T ++++K SSL+ NYNY N+
Sbjct: 71 TERERSKEPKIISSLSNNYNYSNYNNNN 98
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 591 KQKNKYKHCNSSLARNYNY 535
++++K SSL+ NYNY
Sbjct: 73 RERSKEPKIVSSLSNNYNY 91
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 591 KQKNKYKHCNSSLARNYNY 535
++++K SSL+ NYNY
Sbjct: 73 RERSKEPKIISSLSNNYNY 91
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 591 KQKNKYKHCNSSLARNYNY 535
++++K SSL+ NYNY
Sbjct: 73 RERSKEPKIISSLSNNYNY 91
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 591 KQKNKYKHCNSSLARNYNY 535
++++K SSL+ NYNY
Sbjct: 73 RERSKEPKIISSLSNNYNY 91
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 591 KQKNKYKHCNSSLARNYNY 535
++++K SSL+ NYNY
Sbjct: 73 RERSKEPKIISSLSNNYNY 91
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 591 KQKNKYKHCNSSLARNYNY 535
++++K SSL+ NYNY
Sbjct: 73 RERSKEPKIISSLSNNYNY 91
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 591 KQKNKYKHCNSSLARNYNY 535
++++K SSL+ NYNY
Sbjct: 73 RERSKEPKIISSLSNNYNY 91
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 591 KQKNKYKHCNSSLARNYNY 535
++++K SSL+ NYNY
Sbjct: 73 RERSKEPKIISSLSNNYNY 91
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +2
Query: 356 SPAGDPSQTSGVVVGASGYGFV 421
S + DP +G+V+G + G +
Sbjct: 125 SESTDPGLVAGIVIGVTSLGLL 146
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +2
Query: 356 SPAGDPSQTSGVVVGASGYGFV 421
S + DP +G+V+G + G +
Sbjct: 96 SESTDPGLVAGIVIGVTSLGLL 117
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 7.1
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 374 SQTSGVVVGASGYGFVPPGSQGKAYG 451
S GVV GASG V + G G
Sbjct: 25 SSAGGVVTGASGGSIVVGANNGGGGG 50
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 374 SQTSGVVVGASGYGFVPP 427
S +SG++ S YG+V P
Sbjct: 313 SGSSGILTPVSPYGYVKP 330
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 351 PPRRPVTPRRQAE 389
PP RP RR+AE
Sbjct: 25 PPTRPTRLRREAE 37
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,883
Number of Sequences: 438
Number of extensions: 4082
Number of successful extensions: 40
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -