Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16a12
(669 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_03_0227 + 11934530-11934638,11937206-11937351,11937492-119376... 188 5e-48
12_01_0813 + 7475591-7475693,7476972-7477117,7477205-7477324,747... 182 2e-46
08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-45... 128 5e-30
08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365... 111 5e-25
03_01_0215 + 1696250-1696573,1697653-1697793,1698267-1698539,169... 107 8e-24
04_04_1543 - 34270578-34270718,34271069-34271341,34271782-342719... 99 2e-21
04_01_0026 - 354855-354876,355184-355248,355710-355817,356215-35... 90 2e-18
07_03_1324 - 25825153-25825197,25825705-25825785,25825907-258259... 83 1e-16
08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104... 81 6e-16
06_01_0718 + 5233030-5233062,5233329-5233383,5233543-5233660,523... 78 6e-15
02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714... 77 1e-14
06_01_0067 + 561910-561987,562698-562759,564293-564338,564701-56... 77 1e-14
10_07_0162 - 13713504-13714754,13716445-13716522 29 2.5
03_02_0147 - 5923117-5923215,5923882-5924069,5924885-5924977,592... 29 2.5
07_03_1713 + 28939446-28939574,28939674-28940231,28940338-289404... 29 4.4
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 28 5.9
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 28 5.9
06_01_1161 - 9872947-9873800,9874187-9874331,9874628-9874681 28 5.9
05_07_0306 - 29108860-29109282,29109425-29110441 28 5.9
04_04_1659 - 35127145-35127204,35127324-35127464,35127597-351276... 28 7.7
03_06_0407 - 33714563-33714636,33714966-33715152,33715943-337160... 28 7.7
>11_03_0227 +
11934530-11934638,11937206-11937351,11937492-11937611,
11937731-11937898,11938534-11938623,11938920-11939018
Length = 243
Score = 188 bits (457), Expect = 5e-48
Identities = 81/137 (59%), Positives = 112/137 (81%)
Frame = +2
Query: 257 RAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSD 436
R +L+GPPGSGKGTQ+P +K++YC+CHL+TGDMLRA V++ + LG + K+ MD+G+LVSD
Sbjct: 32 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSD 91
Query: 437 EMVVDMIDKNLDQPECKNGFLLDGFPRTVPQAEKLDDLLAKRKTALDAVIEFGIEDSLLV 616
++VV +ID+ + +P C+ GF+LDGFPRTV QA+KLD++L K+ T +D V+ F I+DS+L
Sbjct: 92 DLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKKGTKVDKVLNFAIDDSILE 151
Query: 617 RRITGRLIHPPSGRXYH 667
RITGR IHP SGR YH
Sbjct: 152 ERITGRWIHPSSGRSYH 168
>12_01_0813 +
7475591-7475693,7476972-7477117,7477205-7477324,
7477445-7477612,7478252-7478341,7478941-7479039
Length = 241
Score = 182 bits (444), Expect = 2e-46
Identities = 78/137 (56%), Positives = 111/137 (81%)
Frame = +2
Query: 257 RAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSD 436
R +L+GPPG GKGTQ+P +K+++C+CHL+TGDMLRA V++ + LG + K+ MD+G+LVSD
Sbjct: 30 RVILVGPPGCGKGTQSPLIKDEFCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSD 89
Query: 437 EMVVDMIDKNLDQPECKNGFLLDGFPRTVPQAEKLDDLLAKRKTALDAVIEFGIEDSLLV 616
++VV +ID+ + + C+ GF+LDGFPRTV QA+KLD++LAK+ T +D V+ F I+D++L
Sbjct: 90 DLVVGIIDEAMKKTSCQKGFILDGFPRTVVQAQKLDEMLAKQGTKIDKVLNFAIDDAILE 149
Query: 617 RRITGRLIHPPSGRXYH 667
RITGR IHP SGR YH
Sbjct: 150 ERITGRWIHPSSGRSYH 166
>08_01_0066 -
455589-455687,455902-455976,456531-456677,457158-457292,
457380-457508,457719-457814,458212-458403
Length = 290
Score = 128 bits (308), Expect = 5e-30
Identities = 66/155 (42%), Positives = 99/155 (63%), Gaps = 1/155 (0%)
Frame = +2
Query: 206 PAAAATKLKPDEDPLGIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSD 385
P AA + DPL + ++ G P SGKGTQ +K KY + H+S GD+LRAE+++GS+
Sbjct: 60 PRAAKVVVAVKADPL--KVMIAGAPASGKGTQCELIKSKYGLVHISAGDLLRAEIAAGSE 117
Query: 386 LGRRLKKVMDEGKLVSDEMVVDMIDKNLDQPEC-KNGFLLDGFPRTVPQAEKLDDLLAKR 562
G+R K+ M++G+LV DE+VV+M+ + L QP+ + G+LLDG+PR+ QA L+ L +
Sbjct: 118 NGKRAKEFMEKGQLVPDEIVVNMVKERLLQPDAQEKGWLLDGYPRSYSQAMALETLNIRP 177
Query: 563 KTALDAVIEFGIEDSLLVRRITGRLIHPPSGRXYH 667
D I + D LLV R+ GR + P +G+ YH
Sbjct: 178 ----DIFILLDVPDELLVERVVGRRLDPVTGKIYH 208
>08_02_0034 -
11435678-11435702,11435787-11435816,11436364-11436501,
11436646-11436755,11436838-11436867,11437948-11437993,
11438453-11438622,11439156-11439221,11439299-11439378,
11440704-11440842,11440933-11441013,11441112-11441147,
11441414-11441539,11442084-11442179,11443615-11443689,
11444288-11444434,11445155-11445229,11445485-11445619,
11445706-11445834,11446161-11446292,11446395-11446598
Length = 689
Score = 111 bits (267), Expect = 5e-25
Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 22/175 (12%)
Frame = +2
Query: 209 AAAATKLKPDEDPLGIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDL 388
AAAA K P ++ ++ G P SGKGTQ + EKY + H+STGD+LRAEVSSG+++
Sbjct: 81 AAAARKEAP------LKVMISGAPASGKGTQCRMIVEKYGLVHISTGDLLRAEVSSGTEI 134
Query: 389 GRRLKKVMDEGKLVSDEMVVDMIDKNLDQPECK-NGFLLDGFPRTVPQAEKLDDLLAKRK 565
G++ K+ MD G LV D++V DM+ L QP+ + G+LLDG+PR+ QA+ L+ + +
Sbjct: 135 GKKAKEYMDNGMLVPDQVVTDMVVSRLSQPDVRERGWLLDGYPRSYAQAQSLESMKIRPD 194
Query: 566 TALDAVIEF---------------------GIEDSLLVRRITGRLIHPPSGRXYH 667
+ IE + D +L+ R GR + P +G+ YH
Sbjct: 195 IFIVLEIELYNQFIKFLVHENITGYFNNVSTVPDDILIDRCVGRRLDPETGKIYH 249
>03_01_0215 +
1696250-1696573,1697653-1697793,1698267-1698539,
1698755-1698814,1698890-1699033
Length = 313
Score = 107 bits (257), Expect = 8e-24
Identities = 59/155 (38%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Frame = +2
Query: 209 AAAATKLKPDEDPLGIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDL 388
AAA + + ++ V LG PG GKGT A RL V H++TGD++R E++S L
Sbjct: 46 AAAGRARQRVAEERNVQWVFLGCPGVGKGTYASRLSRLLGVPHIATGDLVRDELASSGPL 105
Query: 389 GRRLKKVMDEGKLVSDEMVVDMIDKNLDQPE--CKNGFLLDGFPRTVPQAEKLDDLLAKR 562
+L +++++GKLVSDE++++++ K L + E ++GF+LDGFPRTV QAE LD +
Sbjct: 106 SVQLAEIVNQGKLVSDEIIINLLSKRLKKGEEQGESGFILDGFPRTVKQAEILDGV---- 161
Query: 563 KTALDAVIEFGIEDSLLVRRITGRLIHPPSGRXYH 667
T +D V+ + + +LV + GR I G+ ++
Sbjct: 162 -TDIDMVVNLKLREDVLVEKCLGRRICGQCGKNFN 195
>04_04_1543 -
34270578-34270718,34271069-34271341,34271782-34271922,
34272365-34272667
Length = 285
Score = 99 bits (238), Expect = 2e-21
Identities = 54/146 (36%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Frame = +2
Query: 203 APAAAATKLKPDEDPLGIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGS 382
A A + + +ED ++ V LG PG GKGT A RL + V H++TGD++R ++S
Sbjct: 37 AVARRGREREREEDGRRVQWVFLGCPGVGKGTYASRLSQMLRVPHIATGDLVRDALASPG 96
Query: 383 DLGRRLKKVMDEGKLVSDEMVVDMIDKNLDQPECKN--GFLLDGFPRTVPQAEKLDDLLA 556
+L ++++ GKLVSDE++++++ K L++ K GF+LDGFPRT+ QAE L+ +
Sbjct: 97 PFSEQLAEIVNNGKLVSDEIIINLLSKRLEEGAEKGELGFILDGFPRTIRQAEILEGV-- 154
Query: 557 KRKTALDAVIEFGIEDSLLVRRITGR 634
T +D VI + + L+ + GR
Sbjct: 155 ---TDIDLVINLKLREEALLAKCLGR 177
>04_01_0026 -
354855-354876,355184-355248,355710-355817,356215-356295,
356729-356885,356990-357107,357485-357533,357806-357901
Length = 231
Score = 89.8 bits (213), Expect = 2e-18
Identities = 47/125 (37%), Positives = 72/125 (57%)
Frame = +2
Query: 260 AVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDE 439
A +LG PGSGKGTQ R+ + HLS GD+LR+E+S+G + G + ++ EGK+V E
Sbjct: 45 AFVLGGPGSGKGTQCVRIASDFGFAHLSAGDLLRSEISTGGEKGELILNIIKEGKIVPSE 104
Query: 440 MVVDMIDKNLDQPECKNGFLLDGFPRTVPQAEKLDDLLAKRKTALDAVIEFGIEDSLLVR 619
+ V++I K ++ + K L+DGFPR + + T D VI F + +V+
Sbjct: 105 ITVELIRKAMESSDAKR-VLIDGFPRCEENRIAFERITG---TEPDLVIFFDCPEDEMVK 160
Query: 620 RITGR 634
R+ GR
Sbjct: 161 RLLGR 165
>07_03_1324 -
25825153-25825197,25825705-25825785,25825907-25825967,
25826005-25826060,25826171-25826239,25826366-25826473,
25826555-25826635,25826795-25826951,25827060-25827177,
25827285-25827339,25827779-25827814
Length = 288
Score = 83.4 bits (197), Expect = 1e-16
Identities = 44/123 (35%), Positives = 71/123 (57%)
Frame = +2
Query: 266 LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEMV 445
+LG PGSGKGTQ + E + HLS GD+LRAE+ SGS+ G ++ ++ EGK+V E+
Sbjct: 29 VLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPSEVT 88
Query: 446 VDMIDKNLDQPECKNGFLLDGFPRTVPQAEKLDDLLAKRKTALDAVIEFGIEDSLLVRRI 625
+ ++ + + E + FL+DGFPR +++ K + V+ F + + RR+
Sbjct: 89 IKLLQDAMIKNE-NDKFLIDGFPRNEENRAAFENV---TKISPAFVLFFDCSEEEMERRL 144
Query: 626 TGR 634
GR
Sbjct: 145 LGR 147
>08_01_0130 +
1040696-1041049,1042135-1042275,1042422-1042673,
1043797-1043904,1044289-1044593,1044720-1044841,
1044979-1045225,1045308-1045365,1045414-1045530,
1045718-1045753,1046492-1046554,1046958-1047047,
1047241-1047399,1047475-1047596,1048145-1048217,
1048307-1048375
Length = 771
Score = 81.4 bits (192), Expect = 6e-16
Identities = 48/140 (34%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Frame = +2
Query: 251 GIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLV 430
G + V++G PG K A RL E V ++S G ++R E+S S L +++ ++EGKLV
Sbjct: 70 GPQWVVMGRPGPQKHAHAARLAEVLAVPYISMGTLVRQELSPASSLYKKIANSVNEGKLV 129
Query: 431 SDEMVVDMIDKNLDQPECK--NGFLLDGFPRTVPQAEKLDDLLAKRKTALDAVIEFGIED 604
++++ ++ K L++ K GF+LDG PRT QAE LD+++ +D V+ F D
Sbjct: 130 PEDIIFGLLTKRLEEGYNKGETGFILDGIPRTHMQAEILDEIV-----DIDLVLNFKCAD 184
Query: 605 SLLVRRITGRLIHPPSGRXY 664
+ ++R G I P G+ +
Sbjct: 185 NCFMKRRFGGDICPHCGQLF 204
>06_01_0718 +
5233030-5233062,5233329-5233383,5233543-5233660,
5233746-5233902,5234033-5234113,5234213-5234320,
5234448-5234483
Length = 195
Score = 78.2 bits (184), Expect = 6e-15
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Frame = +2
Query: 206 PAAAATKLKPDEDPLGIRAV----LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVS 373
P K +E+ LG + V +LG PGSGKGTQ + E + HLS G++LRAE++
Sbjct: 4 PDVLTEKKDINENMLGGKKVKIIFVLGGPGSGKGTQCSNIVEHFGFIHLSAGELLRAEIN 63
Query: 374 SGSDLGRRLKKVMDEGKLVSDEMVVDMIDKNLDQPECKNGFLLDGFPRTVPQAEKLDDLL 553
SGS+ G + ++ EGK+V E+ + ++ + + + + +++DGFPR + ++
Sbjct: 64 SGSENGTMIDTIITEGKIVPSEITIKLLQEAIIKGG-NDKYIIDGFPRNEENRVVFESVI 122
Query: 554 AKRKTALDAVIEFGIEDSLLVRRITGR 634
+ + + V+ F + + RR+ GR
Sbjct: 123 S---ISPEFVLFFDCSEEEMERRLLGR 146
>02_05_0942 +
32970537-32970581,32971059-32971113,32971300-32971417,
32971567-32971615,32971637-32971723,32971890-32971970,
32972074-32972181,32972432-32972503,32973218-32973250
Length = 215
Score = 77.4 bits (182), Expect = 1e-14
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Frame = +2
Query: 203 APAAAATKLKPDEDPLGIRAV----LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEV 370
AP A + + ++ LG + V +LG PGSGKGTQ + E + HLS GD+LRAE+
Sbjct: 7 APTVVAGQEEVTDNMLGDKKVTVVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEI 66
Query: 371 SSGSDLGRRLKKVMDEGKLVSDEMVVDMIDKNLDQPECKNGFLLDGFPRTVPQAEKLDDL 550
SGS+ G ++ ++ EGK+V E MI D+ FL+DGFPR +++
Sbjct: 67 KSGSENGTMIENMIKEGKIVPSEEA--MIKSGNDK------FLIDGFPRNEENRAAFENV 118
Query: 551 LAKRKTALDAVIEFGIEDSLLVRRITGR 634
K V+ F + + RR+ GR
Sbjct: 119 ---TKITPAFVLFFDCSEEEMERRLLGR 143
>06_01_0067 +
561910-561987,562698-562759,564293-564338,564701-564758,
564892-565009,565130-565286,565611-565718,565884-565955,
566058-566174,566309-566404
Length = 303
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/84 (41%), Positives = 57/84 (67%)
Frame = +2
Query: 266 LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEMV 445
++G PGSGKGTQ ++ +++ HLS GD+LR E ++ G +K +M+EGKLVS +++
Sbjct: 80 VIGGPGSGKGTQCAKIVKQFGFTHLSAGDLLREEAKYDTEQGTMIKNLMNEGKLVSSDLI 139
Query: 446 VDMIDKNLDQPECKNGFLLDGFPR 517
V ++ K + + + FL+DGFPR
Sbjct: 140 VKLLFKAM-RESGNDKFLVDGFPR 162
>10_07_0162 - 13713504-13714754,13716445-13716522
Length = 442
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 275 PPGSGKGTQAPRLKEKYCVCHLSTG 349
PPG+G +AP ++ C C L TG
Sbjct: 15 PPGAGVRVRAPLVESVSCYCRLDTG 39
>03_02_0147 -
5923117-5923215,5923882-5924069,5924885-5924977,
5925499-5925628,5925720-5925802,5925893-5925976,
5926253-5926316,5926375-5926515,5926801-5926863,
5926968-5927006,5927126-5927185,5927567-5927624,
5927708-5928099
Length = 497
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 362 HAACHQWIGDKHNTFLSDEEPE 297
HA QWI +K+NTF+S + E
Sbjct: 448 HAEARQWIDEKYNTFISKLQVE 469
>07_03_1713 +
28939446-28939574,28939674-28940231,28940338-28940460,
28940676-28940912
Length = 348
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 236 DEDPLGIRAVLLGPPGSGKGTQAPR 310
DE G R +GPPG+G G + PR
Sbjct: 166 DEPGYGYRPPPVGPPGAGYGNRLPR 190
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 28.3 bits (60), Expect = 5.9
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +2
Query: 245 PLGIRAVLLGPPGSGKGTQAPRL-KEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEG 421
P GI +L GPPGSGK A + E L G + ++++ S+ L+K +E
Sbjct: 244 PKGI--LLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESE--SNLRKAFEEA 299
Query: 422 KLVSDEMV-VDMIDKNLDQPECKNG 493
+ + ++ +D ID + E NG
Sbjct: 300 EKNAPSIIFIDEIDSIAPKREKTNG 324
>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 562 QDCTGRRNRVRNRGQSARK--ENYGQTDSPT 648
Q+CT RNR+R +K EN TD+PT
Sbjct: 1651 QECTEERNRIRVELDLVKKLLENMALTDNPT 1681
>06_01_1161 - 9872947-9873800,9874187-9874331,9874628-9874681
Length = 350
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 242 DPLGIRAVLLGPP--GSGKGTQAPRLKEKYCVCHLST 346
+P + AV+L GSG G+ P E VCHL T
Sbjct: 263 NPTRVYAVVLESEEDGSGSGSGTPEKMEALAVCHLDT 299
>05_07_0306 - 29108860-29109282,29109425-29110441
Length = 479
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +2
Query: 263 VLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEM 442
+L GPPG+GK + + D+ EV S SDL R L + + LV +++
Sbjct: 254 LLYGPPGTGKSSLIAAMAN---YLKFDIYDLELTEVKSNSDLRRLLVGMSNRSILVVEDI 310
Query: 443 VVDMIDKNLDQPECK 487
+ + D+ E K
Sbjct: 311 DCTIDLQQRDEGEIK 325
>04_04_1659 -
35127145-35127204,35127324-35127464,35127597-35127647,
35127757-35127837,35128229-35128324,35128393-35128568,
35130088-35130176,35130255-35130362,35130673-35130809,
35131023-35131073,35131264-35131310,35131477-35131544,
35132161-35132262,35132556-35132735,35132821-35133059
Length = 541
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 443 VVDMIDKNLDQPECKNGFLLDGFPRTVPQAEKLDDLLAK 559
V ++I ++D+P+ NGF LD F E+ D LL K
Sbjct: 182 VHEIIFSSIDKPKLLNGFCLDVFVVDGWDTEETDGLLQK 220
>03_06_0407 -
33714563-33714636,33714966-33715152,33715943-33716093,
33716520-33716632,33717022-33717085,33717180-33717391,
33717540-33717621,33717811-33717866,33718004-33718072,
33718524-33718772,33718873-33719049,33719556-33719702,
33719794-33719926,33720093-33720307
Length = 642
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 200 MAPAAAATKLKPDEDPLGIRAVLLGPPGSGKGT 298
MA AA A L + G+R V++G PG+GK +
Sbjct: 1 MAAAATAANLAGKQ---GVRVVVIGDPGTGKSS 30
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,972,744
Number of Sequences: 37544
Number of extensions: 398646
Number of successful extensions: 1185
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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