Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt16a12
         (669 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   3.5  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    23   3.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   8.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   8.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   8.0  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   8.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   8.0  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 610 QTVLDSELDYGVQCSLAL 557
           Q +LD  LDY + C L++
Sbjct: 56  QFILDVRLDYRISCLLSI 73


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 610 QTVLDSELDYGVQCSLAL 557
           Q +LD  LDY + C L++
Sbjct: 24  QFILDVRLDYRISCLLSI 41


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = -3

Query: 646 WVNQSARNSPYEQTVLD--SELDYGVQCSLALRQ*IVQLLSLG 524
           W+   A +SP      D   EL+ G  C L  RQ  V   SLG
Sbjct: 161 WILSGAISSPPLAGWNDWPEELEPGTPCQLTRRQGYVIYSSLG 203


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = -3

Query: 646 WVNQSARNSPYEQTVLD--SELDYGVQCSLALRQ*IVQLLSLG 524
           W+   A +SP      D   EL+ G  C L  RQ  V   SLG
Sbjct: 161 WILSGAISSPPLAGWNDWPEELEPGTPCQLTRRQGYVIYSSLG 203


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = -3

Query: 646 WVNQSARNSPYEQTVLD--SELDYGVQCSLALRQ*IVQLLSLG 524
           W+   A +SP      D   EL+ G  C L  RQ  V   SLG
Sbjct: 161 WILSGAISSPPLAGWNDWPEELEPGTPCQLTRRQGYVIYSSLG 203


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 387 WDDALRRSWMRAN 425
           WD AL   W+R N
Sbjct: 224 WDQALALRWLRDN 236


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 387 WDDALRRSWMRAN 425
           WD AL   W+R N
Sbjct: 224 WDQALALRWLRDN 236


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,790
Number of Sequences: 438
Number of extensions: 3710
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)