Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt16a03
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b... 120 4e-27
BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+ transp... 120 6e-27
BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+ transp... 120 6e-27
AY871272-1|AAX11428.1| 256|Homo sapiens cell proliferation-indu... 120 6e-27
AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+ transp... 120 6e-27
AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+ transp... 120 6e-27
BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+ transp... 117 4e-26
AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+ transp... 82 2e-15
BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein. 33 0.67
BC119788-1|AAI19789.1| 626|Homo sapiens APOB48R protein protein. 30 8.2
BC119786-1|AAI19787.1| 1088|Homo sapiens apolipoprotein B48 rece... 30 8.2
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 30 8.2
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 30 8.2
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 30 8.2
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 30 8.2
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 8.2
AF141334-1|AAF78765.1| 1076|Homo sapiens placenta apolipoprotein... 30 8.2
AF141333-1|AAF76256.1| 1088|Homo sapiens apolipoprotein B48 rece... 30 8.2
AF141332-1|AAF76255.1| 1088|Homo sapiens apolipoprotein B48 rece... 30 8.2
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 8.2
>X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b
protein.
Length = 256
Score = 120 bits (289), Expect = 4e-27
Identities = 75/191 (39%), Positives = 105/191 (54%), Gaps = 7/191 (3%)
Frame = +1
Query: 94 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 255
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 256 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 432
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLVLYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 433 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEXWRAQGQELLIXAKKENVLLQLE 612
+A + DK E + E + +++ +++AI+ EK++ Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 613 AAYRERLMYAY 645
YRERL Y
Sbjct: 180 VTYRERLYRVY 190
>BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 120 bits (288), Expect = 6e-27
Identities = 75/191 (39%), Positives = 105/191 (54%), Gaps = 7/191 (3%)
Frame = +1
Query: 94 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 255
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 256 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 432
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 433 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEXWRAQGQELLIXAKKENVLLQLE 612
+A + DK E + E + +++ +++AI+ EK++ Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 613 AAYRERLMYAY 645
YRERL Y
Sbjct: 180 VTYRERLYRVY 190
>BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 120 bits (288), Expect = 6e-27
Identities = 75/191 (39%), Positives = 105/191 (54%), Gaps = 7/191 (3%)
Frame = +1
Query: 94 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 255
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 256 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 432
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 433 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEXWRAQGQELLIXAKKENVLLQLE 612
+A + DK E + E + +++ +++AI+ EK++ Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 613 AAYRERLMYAY 645
YRERL Y
Sbjct: 180 VTYRERLYRVY 190
>AY871272-1|AAX11428.1| 256|Homo sapiens cell
proliferation-inducing protein 47 protein.
Length = 256
Score = 120 bits (288), Expect = 6e-27
Identities = 75/191 (39%), Positives = 105/191 (54%), Gaps = 7/191 (3%)
Frame = +1
Query: 94 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 255
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 256 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 432
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 433 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEXWRAQGQELLIXAKKENVLLQLE 612
+A + DK E + E + +++ +++AI+ EK++ Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 613 AAYRERLMYAY 645
YRERL Y
Sbjct: 180 VTYRERLYRVY 190
>AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 120 bits (288), Expect = 6e-27
Identities = 75/191 (39%), Positives = 105/191 (54%), Gaps = 7/191 (3%)
Frame = +1
Query: 94 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 255
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 256 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 432
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 433 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEXWRAQGQELLIXAKKENVLLQLE 612
+A + DK E + E + +++ +++AI+ EK++ Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 613 AAYRERLMYAY 645
YRERL Y
Sbjct: 180 VTYRERLYRVY 190
>AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit b
isoform 1 pr protein.
Length = 256
Score = 120 bits (288), Expect = 6e-27
Identities = 75/191 (39%), Positives = 105/191 (54%), Gaps = 7/191 (3%)
Frame = +1
Query: 94 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 255
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 256 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 432
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 433 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEXWRAQGQELLIXAKKENVLLQLE 612
+A + DK E + E + +++ +++AI+ EK++ Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 613 AAYRERLMYAY 645
YRERL Y
Sbjct: 180 VTYRERLYRVY 190
>BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 117 bits (281), Expect = 4e-26
Identities = 74/191 (38%), Positives = 104/191 (54%), Gaps = 7/191 (3%)
Frame = +1
Query: 94 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 255
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 256 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 432
EE+FQF + KTGVTGPY G GL Y SK IYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKGIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 433 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEXWRAQGQELLIXAKKENVLLQLE 612
+A + DK E + E + +++ +++AI+ EK++ Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 613 AAYRERLMYAY 645
YRERL Y
Sbjct: 180 VTYRERLYRVY 190
>AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 195
Score = 81.8 bits (193), Expect = 2e-15
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = +1
Query: 280 SKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPKLAAWLDKE 456
S GPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP +A + DK
Sbjct: 8 SAAATAGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPFVADFADKL 66
Query: 457 VEATENEWNEGRNQTVKALEDAIEGEKTEXWRAQGQELLIXAKKENVLLQLEAAYRERLM 636
E + E + +++ +++AI+ EK++ Q + L ++ N+ + LE YRERL
Sbjct: 67 NEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLY 126
Query: 637 YAY 645
Y
Sbjct: 127 RVY 129
>BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein.
Length = 913
Score = 33.5 bits (73), Expect = 0.67
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 448 DKEVEATENEWNEGRNQTVKALEDAIEGEKTEXWRAQGQEL-LIXAKKENVLLQLEAAYR 624
D ++EA N WN G + K +E EK + + ++ I +K N + +L+ YR
Sbjct: 201 DSDIEARLNSWNLGLDMKTKMMEAKFHEEKLKLQQKHDADVQKILERKNNEIEELKTLYR 260
Query: 625 ER 630
+
Sbjct: 261 SK 262
>BC119788-1|AAI19789.1| 626|Homo sapiens APOB48R protein protein.
Length = 626
Score = 29.9 bits (64), Expect = 8.2
Identities = 38/144 (26%), Positives = 56/144 (38%), Gaps = 7/144 (4%)
Frame = +1
Query: 223 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 402
E + G + EW HS T GP G +E E E L+L
Sbjct: 67 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 126
Query: 403 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEXWRAQGQE 567
++ GP+ A + E EA W + ++ EDA +GE + E A GQ
Sbjct: 127 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 186
Query: 568 LLIXAK--KENVLLQLEAAYRERL 633
L A+ +E+ L ++ A E L
Sbjct: 187 LAAEAEGDRESELSEVPEAGGEGL 210
>BC119786-1|AAI19787.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 29.9 bits (64), Expect = 8.2
Identities = 38/144 (26%), Positives = 56/144 (38%), Gaps = 7/144 (4%)
Frame = +1
Query: 223 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 402
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 403 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEXWRAQGQE 567
++ GP+ A + E EA W + ++ EDA +GE + E A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 568 LLIXAK--KENVLLQLEAAYRERL 633
L A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 8.2
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -2
Query: 484 RSIRSRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 308
RS R R + P P ++ VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 307 CKDPSHQ 287
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 8.2
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -2
Query: 484 RSIRSRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 308
RS R R + P P ++ VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 307 CKDPSHQ 287
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 8.2
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -2
Query: 484 RSIRSRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 308
RS R R + P P ++ VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 307 CKDPSHQ 287
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 8.2
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -2
Query: 484 RSIRSRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 308
RS R R + P P ++ VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 307 CKDPSHQ 287
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 29.9 bits (64), Expect = 8.2
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -2
Query: 484 RSIRSRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 308
RS R R + P P ++ VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 307 CKDPSHQ 287
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AF141334-1|AAF78765.1| 1076|Homo sapiens placenta apolipoprotein
B48 receptor type 2 protein.
Length = 1076
Score = 29.9 bits (64), Expect = 8.2
Identities = 38/144 (26%), Positives = 56/144 (38%), Gaps = 7/144 (4%)
Frame = +1
Query: 223 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 402
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 403 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEXWRAQGQE 567
++ GP+ A + E EA W + ++ EDA +GE + E A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 568 LLIXAK--KENVLLQLEAAYRERL 633
L A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AF141333-1|AAF76256.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 29.9 bits (64), Expect = 8.2
Identities = 38/144 (26%), Positives = 56/144 (38%), Gaps = 7/144 (4%)
Frame = +1
Query: 223 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 402
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 403 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEXWRAQGQE 567
++ GP+ A + E EA W + ++ EDA +GE + E A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 568 LLIXAK--KENVLLQLEAAYRERL 633
L A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AF141332-1|AAF76255.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 29.9 bits (64), Expect = 8.2
Identities = 38/144 (26%), Positives = 56/144 (38%), Gaps = 7/144 (4%)
Frame = +1
Query: 223 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 402
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 403 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEXWRAQGQE 567
++ GP+ A + E EA W + ++ EDA +GE + E A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 568 LLIXAK--KENVLLQLEAAYRERL 633
L A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 29.9 bits (64), Expect = 8.2
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -2
Query: 484 RSIRSRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 308
RS R R + P P ++ VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 307 CKDPSHQ 287
K+PS Q
Sbjct: 230 VKEPSVQ 236
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,956,450
Number of Sequences: 237096
Number of extensions: 2152395
Number of successful extensions: 8204
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8198
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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