Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt15p02
(622 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 24 1.0
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 22 4.2
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 5.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 5.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 5.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 5.5
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 5.5
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 5.5
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 5.5
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 5.5
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 9.7
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 24.2 bits (50), Expect = 1.0
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 501 KP-ERLDFKDDDQISERKEITEQKEPINKS 587
KP E D KDDD+ S+ + I QKE N S
Sbjct: 80 KPKEETDDKDDDE-SDNENIKSQKEFPNSS 108
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -2
Query: 552 PFFQKFDHRL*SRVFQAYYQYSDKYW 475
PF+ + HRL +++ Y Y W
Sbjct: 111 PFWDEDQHRLYAQIKTGSYDYPSPEW 136
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 480 YWIFHQNVPSLLIAVI 433
Y +FH +PS LI V+
Sbjct: 215 YHLFHTYIPSALIVVM 230
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +3
Query: 438 QQLAEKAHSDEISSIYPNTDNKPERLDFKDDDQISERKEI 557
+ ++ +H DE N DNK + ++++ R+E+
Sbjct: 3 RNISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +3
Query: 438 QQLAEKAHSDEISSIYPNTDNKPERLDFKDDDQISERKEI 557
+ ++ +H DE N DNK + ++++ R+E+
Sbjct: 3 RNISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +3
Query: 438 QQLAEKAHSDEISSIYPNTDNKPERLDFKDDDQISERKEI 557
+ ++ +H DE N DNK + ++++ R+E+
Sbjct: 3 RNISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +3
Query: 438 QQLAEKAHSDEISSIYPNTDNKPERLDFKDDDQISERKEI 557
+ ++ +H DE N DNK + ++++ R+E+
Sbjct: 3 RNISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +3
Query: 438 QQLAEKAHSDEISSIYPNTDNKPERLDFKDDDQISERKEI 557
+ ++ +H DE N DNK + ++++ R+E+
Sbjct: 3 RNISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +3
Query: 438 QQLAEKAHSDEISSIYPNTDNKPERLDFKDDDQISERKEI 557
+ ++ +H DE N DNK + ++++ R+E+
Sbjct: 3 RNISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +3
Query: 438 QQLAEKAHSDEISSIYPNTDNKPERLDFKDDDQISERKEI 557
+ ++ +H DE N DNK + ++++ R+E+
Sbjct: 3 RNISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 309 EYLTNRGAHCLKKLITVQEDF 371
E + N+G CL+ L V DF
Sbjct: 804 ESINNQGLECLRFLNEVISDF 824
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,768
Number of Sequences: 438
Number of extensions: 3194
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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