Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt15l18
         (626 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    26   0.35 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.8  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   9.8  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   9.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.8  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 9/42 (21%), Positives = 23/42 (54%)
 Frame = +2

Query: 134 VDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKL 259
           VD+ K   ++L  +   +  + CD+  + D ++++ W++  L
Sbjct: 41  VDKMKTLVEELKSKPGKLVPLQCDLSNQNDILKVIEWVEKNL 82


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
          protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 40 FSCLSSTLFSEFQTSFCK 93
          F CL+ST+ SE   + CK
Sbjct: 15 FLCLASTILSESAGTSCK 32


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 619 KPFGTRFLHTFENELQIDRQLST 551
           KPF  R  H    +L +DR + T
Sbjct: 105 KPFQIRMKHGLIRDLIVDRDVPT 127


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 401 PNDHRYKLYFFL 366
           P   RYK++FFL
Sbjct: 613 PEGMRYKMFFFL 624


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 401 PNDHRYKLYFFL 366
           P   RYK++FFL
Sbjct: 613 PEGMRYKMFFFL 624


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 131 YVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCI 229
           ++ QN +     L E     ++S DVK  ++CI
Sbjct: 87  HIIQNDEIQLDKLVEMANRKNISIDVKMLSECI 119


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 431 IHQISMQVVHPNDHRYKLYF 372
           I  +S   +H N++  KLY+
Sbjct: 315 ISSLSNNTIHNNNYNKKLYY 334


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 539 YKGTGAELPVNLKFIFECMEESGSE 613
           Y   G+ +P N KFI +    S  E
Sbjct: 310 YYEVGSNVPFNFKFITDANSSSTPE 334


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,488
Number of Sequences: 438
Number of extensions: 3568
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)