Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt15k07
(669 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 24 1.5
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.0
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 2.6
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 3.5
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 23 3.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 4.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 4.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 4.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 4.6
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 6.1
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 8.0
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 21 8.0
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 201 IDTGMDAFRHKLKDPHAAKATY 266
+ TG D HK ++P+ ATY
Sbjct: 307 VSTGSDKENHKTEEPNDEVATY 328
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 512 YRTFAQTLSVLLIGIMVWITIWIVMGETAAPGGQLFTLAVLTIA 643
Y F + LI IM W++ WI E A L ++LT++
Sbjct: 246 YYLFHTYIPTCLIVIMSWVSFWI-KPEAAPARVTLGVTSLLTLS 288
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 512 YRTFAQTLSVLLIGIMVWITIWIVMGETAA 601
Y F L +LI ++ W++ WI T+A
Sbjct: 243 YFVFQTYLPSILIVMLSWVSFWINHEATSA 272
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 512 YRTFAQTLSVLLIGIMVWITIWI 580
Y F + LI +M WI WI
Sbjct: 215 YHLFHTYIPSALIVVMSWIAFWI 237
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 613 LAAGGRRLAHHDPYRYPNHN 554
LAAG +AH+DP+ P H+
Sbjct: 14 LAAG--EIAHNDPHFAPGHD 31
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +2
Query: 575 WIVMGETAAPGGQLFTLAVLTIAA 646
W+ +G A GG+L ++ L++ +
Sbjct: 3 WVALGRCAGGGGRLSSVLSLSLTS 26
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +2
Query: 575 WIVMGETAAPGGQLFTLAVLTIAA 646
W+ +G A GG+L ++ L++ +
Sbjct: 3 WVALGRCAGGGGRLSSVLSLSLTS 26
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +2
Query: 575 WIVMGETAAPGGQLFTLAVLTIAA 646
W+ +G A GG+L ++ L++ +
Sbjct: 3 WVALGRCAGGGGRLSSVLSLSLTS 26
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +2
Query: 575 WIVMGETAAPGGQLFTLAVLTIAA 646
W+ +G A GG+L ++ L++ +
Sbjct: 3 WVALGRCAGGGGRLSSVLSLSLTS 26
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 94 FKLINERKYRVLI*EAC 44
FK +RKY ++ EAC
Sbjct: 432 FKTFKDRKYLYMLMEAC 448
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 204 DTGMDAFRHKLKDPHAAKATYTMLYTQK 287
+ G+D+F +L + A+A +LY K
Sbjct: 211 EPGLDSFTQQLIEMKNAQARVYLLYASK 238
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 255 KATYTMLYTQKWIPHGNDKDTS 320
K TY LY Q W + ++ T+
Sbjct: 282 KGTYKTLYKQMWSQNITERPTT 303
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,804
Number of Sequences: 438
Number of extensions: 4226
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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