Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt15k03
         (696 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens ...    31   3.0  
BC030525-1|AAH30525.1|   55|Homo sapiens Unknown (protein for MG...    31   5.2  

>AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46115 fis, clone TESTI2037085. ).
          Length = 148

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 590 RKKYGRRKTRSQKN*RPRKKRSLKKMTKRTQRKR 691
           +KK  ++K + +K  + +KKR  KK  K+ +RKR
Sbjct: 62  KKKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKR 95



 Score = 31.1 bits (67), Expect = 3.9
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +2

Query: 587 SRKKYGRRKTRSQKN*RPRKKRSLKKMTKRTQRKR 691
           ++KK  ++K + +K  R +KK+  KK  KR +R+R
Sbjct: 66  NKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRR 100


>BC030525-1|AAH30525.1|   55|Homo sapiens Unknown (protein for
           MGC:40524) protein.
          Length = 55

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 590 RKKYGRRKTRSQKN*RPRKKRSLKKMTKRTQRKR 691
           +KK  +RK + +K  + +KK+  KK  KR +R+R
Sbjct: 14  KKKKRKRKKKKKKKKKKKKKKKKKKKKKRRRRRR 47



 Score = 29.9 bits (64), Expect = 9.1
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +2

Query: 590 RKKYGRRKTRSQKN*RPRKKRSLKKMTKRTQRKR 691
           R+  G++K R +K  + +KK+  KK  K+ ++KR
Sbjct: 9   RRGRGKKKKRKRKKKKKKKKKKKKKKKKKKKKKR 42


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,983,268
Number of Sequences: 237096
Number of extensions: 559918
Number of successful extensions: 1527
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)