Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt15i09
         (644 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.63 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.63 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.4  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   5.8  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    22   5.8  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    21   7.7  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    21   7.7  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   7.7  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   7.7  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 297 RSPMRWSDQIKTTFESSINVAIHCAED 217
           R+P +W D +   F SS N  +   E+
Sbjct: 417 RTPFQWDDSVSAGFSSSSNTWLRVNEN 443


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 297 RSPMRWSDQIKTTFESSINVAIHCAED 217
           R+P +W D +   F SS N  +   E+
Sbjct: 417 RTPFQWDDSVSAGFSSSSNTWLRVNEN 443


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 487 TFSYSSQPY 513
           TF YSSQPY
Sbjct: 588 TFKYSSQPY 596


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 487 TFSYSSQPY 513
           TF YSSQPY
Sbjct: 588 TFKYSSQPY 596


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 386 HMSRGCARSRLRKCIS 433
           +M R C   RL+KC++
Sbjct: 234 YMRRKCQECRLKKCLT 249


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 386 HMSRGCARSRLRKCIS 433
           +M R C   RL+KC++
Sbjct: 31  YMRRKCQECRLKKCLT 46


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 407 RSRLRKCISSLSN 445
           RS+ RK ISSLSN
Sbjct: 75  RSKERKIISSLSN 87


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 407 RSRLRKCISSLSN 445
           RS+ RK ISSLSN
Sbjct: 75  RSKERKIISSLSN 87


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 407 RSRLRKCISSLSN 445
           RS+ RK ISSLSN
Sbjct: 308 RSKERKIISSLSN 320


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 407 RSRLRKCISSLSN 445
           RS+ RK ISSLSN
Sbjct: 313 RSKERKIISSLSN 325


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,294
Number of Sequences: 438
Number of extensions: 3083
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)