Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt15i02
(465 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U74324-1|AAB18264.1| 123|Homo sapiens guanine nucleotide exchan... 89 5e-18
BT007133-1|AAP35797.1| 123|Homo sapiens RAB interacting factor ... 89 5e-18
BC037392-1|AAH37392.1| 123|Homo sapiens RAB interacting factor ... 89 5e-18
BC018488-1|AAH18488.1| 123|Homo sapiens RAB interacting factor ... 89 5e-18
S78873-1|AAB34955.1| 123|Homo sapiens Mss4 protein. 88 1e-17
AK223538-1|BAD97258.1| 123|Homo sapiens RAB-interacting factor ... 88 2e-17
BC052259-1|AAH52259.1| 508|Homo sapiens OSBPL6 protein protein. 31 2.6
AK093902-1|BAC04248.1| 938|Homo sapiens protein ( Homo sapiens ... 31 2.6
AK027600-1|BAB55223.1| 719|Homo sapiens protein ( Homo sapiens ... 31 2.6
AF462443-1|AAP97711.1| 898|Homo sapiens OSBP-related protein 6 ... 31 2.6
AF392448-1|AAL40661.1| 934|Homo sapiens oxysterol-binding prote... 31 2.6
AF323728-1|AAG53409.1| 934|Homo sapiens OSBP-related protein 6 ... 31 2.6
AC011743-1|AAY15090.1| 861|Homo sapiens unknown protein. 31 2.6
AB208898-1|BAD92135.1| 966|Homo sapiens oxysterol-binding prote... 31 2.6
BC107756-1|AAI07757.1| 76|Homo sapiens chromosome 3 open readi... 30 3.4
BC071875-1|AAH71875.1| 76|Homo sapiens ADMP protein. 30 3.4
BC065208-1|AAH65208.1| 76|Homo sapiens chromosome 3 open readi... 30 3.4
AF458592-1|AAM49720.1| 76|Homo sapiens ADMP protein. 30 3.4
X76952-1|CAA54274.1| 966|Homo sapiens IAI3B protein. 29 6.0
D30756-1|BAA06417.2| 969|Homo sapiens KIAA0049 protein. 29 6.0
DQ478408-1|ABF14461.1| 583|Homo sapiens neighbor of BRCA1 gene ... 29 6.0
DQ190457-1|ABA29231.1| 558|Homo sapiens neighbor of BRCA1 gene ... 29 6.0
DQ190456-1|ABA29228.1| 558|Homo sapiens neighbor of BRCA1 gene ... 29 6.0
DQ190455-1|ABA29225.1| 583|Homo sapiens neighbor of BRCA1 gene ... 29 6.0
DQ190453-1|ABA29219.1| 583|Homo sapiens neighbor of BRCA1 gene ... 29 6.0
DQ190452-1|ABA29216.1| 478|Homo sapiens neighbor of BRCA1 gene ... 29 6.0
DQ190451-1|ABA29213.1| 502|Homo sapiens neighbor of BRCA1 gene ... 29 6.0
DQ190450-1|ABA29210.1| 553|Homo sapiens neighbor of BRCA1 gene ... 29 6.0
BC009808-1|AAH09808.1| 937|Homo sapiens NBR1 protein protein. 29 6.0
AY450308-1|AAS15047.1| 966|Homo sapiens migration-inducing prot... 29 6.0
D50419-1|BAA23362.1| 711|Homo sapiens OTK18 protein. 29 7.9
BC052997-1|AAH52997.1| 711|Homo sapiens zinc finger protein 175... 29 7.9
AK055946-1|BAB71051.1| 365|Homo sapiens protein ( Homo sapiens ... 29 7.9
AC018755-1|AAF87843.1| 711|Homo sapiens zinc finger protein 175... 29 7.9
>U74324-1|AAB18264.1| 123|Homo sapiens guanine nucleotide exchange
factor mss4 protein.
Length = 123
Score = 89.4 bits (212), Expect = 5e-18
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Frame = +1
Query: 82 VSPIETEQREYVEDGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQ--ASNNDREV 255
+ P E +G+N+ V C+ CGS++L ++ + ++ LP M++ A ++
Sbjct: 1 MEPAEQPSELVSAEGRNRKAVLCQRCGSRVLQPGTALFSRRQLFLPSMRKKPALSDGSNP 60
Query: 256 QNETIKEFYHVENMYTFENIGFTHTVDNHKYLSCADCDAGPVGYHDTNTRHS-YVAISRI 432
+ ++E + VE+M+ FEN+GFT V N K+L CADC+ GP+G+H + ++S YVA+ R+
Sbjct: 61 DGDLLQEHWLVEDMFIFENVGFTKDVGNIKFLVCADCEIGPIGWHCLDDKNSFYVALERV 120
Query: 433 VH 438
H
Sbjct: 121 SH 122
>BT007133-1|AAP35797.1| 123|Homo sapiens RAB interacting factor
protein.
Length = 123
Score = 89.4 bits (212), Expect = 5e-18
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Frame = +1
Query: 82 VSPIETEQREYVEDGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQ--ASNNDREV 255
+ P E +G+N+ V C+ CGS++L ++ + ++ LP M++ A ++
Sbjct: 1 MEPAEQPSELVSAEGRNRKAVLCQRCGSRVLQPGTALFSRRQLFLPSMRKKPALSDGSNP 60
Query: 256 QNETIKEFYHVENMYTFENIGFTHTVDNHKYLSCADCDAGPVGYHDTNTRHS-YVAISRI 432
+ ++E + VE+M+ FEN+GFT V N K+L CADC+ GP+G+H + ++S YVA+ R+
Sbjct: 61 DGDLLQEHWLVEDMFIFENVGFTKDVGNIKFLVCADCEIGPIGWHCLDDKNSFYVALERV 120
Query: 433 VH 438
H
Sbjct: 121 SH 122
>BC037392-1|AAH37392.1| 123|Homo sapiens RAB interacting factor
protein.
Length = 123
Score = 89.4 bits (212), Expect = 5e-18
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Frame = +1
Query: 82 VSPIETEQREYVEDGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQ--ASNNDREV 255
+ P E +G+N+ V C+ CGS++L ++ + ++ LP M++ A ++
Sbjct: 1 MEPAEQPSELVSAEGRNRKAVLCQRCGSRVLQPGTALFSRRQLFLPSMRKKPALSDGSNP 60
Query: 256 QNETIKEFYHVENMYTFENIGFTHTVDNHKYLSCADCDAGPVGYHDTNTRHS-YVAISRI 432
+ ++E + VE+M+ FEN+GFT V N K+L CADC+ GP+G+H + ++S YVA+ R+
Sbjct: 61 DGDLLQEHWLVEDMFIFENVGFTKDVGNIKFLVCADCEIGPIGWHCLDDKNSFYVALERV 120
Query: 433 VH 438
H
Sbjct: 121 SH 122
>BC018488-1|AAH18488.1| 123|Homo sapiens RAB interacting factor
protein.
Length = 123
Score = 89.4 bits (212), Expect = 5e-18
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Frame = +1
Query: 82 VSPIETEQREYVEDGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQ--ASNNDREV 255
+ P E +G+N+ V C+ CGS++L ++ + ++ LP M++ A ++
Sbjct: 1 MEPAEQPSELVSAEGRNRKAVLCQRCGSRVLQPGTALFSRRQLFLPSMRKKPALSDGSNP 60
Query: 256 QNETIKEFYHVENMYTFENIGFTHTVDNHKYLSCADCDAGPVGYHDTNTRHS-YVAISRI 432
+ ++E + VE+M+ FEN+GFT V N K+L CADC+ GP+G+H + ++S YVA+ R+
Sbjct: 61 DGDLLQEHWLVEDMFIFENVGFTKDVGNIKFLVCADCEIGPIGWHCLDDKNSFYVALERV 120
Query: 433 VH 438
H
Sbjct: 121 SH 122
>S78873-1|AAB34955.1| 123|Homo sapiens Mss4 protein.
Length = 123
Score = 88.2 bits (209), Expect = 1e-17
Identities = 40/109 (36%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Frame = +1
Query: 121 DGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQ--ASNNDREVQNETIKEFYHVEN 294
+G+N+ V C+ CGS++L ++ + ++ LP M++ A ++ + ++E + VE+
Sbjct: 14 EGRNRKAVLCQRCGSRVLQPGTALFSRRQLFLPSMRKKPALSDGSNPDGDLLQEHWLVED 73
Query: 295 MYTFENIGFTHTVDNHKYLSCADCDAGPVGYHDTNTRHS-YVAISRIVH 438
M+ FEN+GFT V N K+L CADC+ GP+G+H + ++S YVA+ R+ H
Sbjct: 74 MFIFENVGFTKDVGNIKFLVCADCEIGPIGWHCLDDKNSFYVALERVSH 122
>AK223538-1|BAD97258.1| 123|Homo sapiens RAB-interacting factor
variant protein.
Length = 123
Score = 87.8 bits (208), Expect = 2e-17
Identities = 41/122 (33%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Frame = +1
Query: 82 VSPIETEQREYVEDGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQ--ASNNDREV 255
+ P E +G+N+ V C+ CGS++L ++ + ++ LP M++ A ++
Sbjct: 1 MEPAEQPSELVSAEGRNRKAVLCQRCGSRVLQPGTALFSRRQLFLPSMRKKPALSDGSNP 60
Query: 256 QNETIKEFYHVENMYTFENIGFTHTVDNHKYLSCADCDAGPVGYHDTNTRHS-YVAISRI 432
+ ++E + VE+M+ FEN+GFT V N K+L C DC+ GP+G+H + ++S YVA+ R+
Sbjct: 61 DGDLLQEHWLVEDMFIFENVGFTKDVGNIKFLVCTDCEIGPIGWHCLDDKNSFYVALERV 120
Query: 433 VH 438
H
Sbjct: 121 SH 122
>BC052259-1|AAH52259.1| 508|Homo sapiens OSBPL6 protein protein.
Length = 508
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 214 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 354
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 407 LPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYIS 453
>AK093902-1|BAC04248.1| 938|Homo sapiens protein ( Homo sapiens
cDNA FLJ36583 fis, clone TRACH2013123, moderately
similar to Homo sapiens oxysterol binding
protein-related protein ).
Length = 938
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 214 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 354
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 478 LPLSQQVANESRLPMSESVSEFFDAQEVLLSASSSENEASDDESYIS 524
>AK027600-1|BAB55223.1| 719|Homo sapiens protein ( Homo sapiens
cDNA FLJ14694 fis, clone NT2RP2005407, weakly similar to
OXYSTEROL-BINDING PROTEIN. ).
Length = 719
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 214 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 354
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 259 LPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYIS 305
>AF462443-1|AAP97711.1| 898|Homo sapiens OSBP-related protein 6
isoform protein.
Length = 898
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 214 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 354
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 438 LPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYIS 484
>AF392448-1|AAL40661.1| 934|Homo sapiens oxysterol-binding
protein-like protein OSBPL6 protein.
Length = 934
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 214 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 354
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 474 LPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYIS 520
>AF323728-1|AAG53409.1| 934|Homo sapiens OSBP-related protein 6
protein.
Length = 934
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 214 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 354
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 474 LPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYIS 520
>AC011743-1|AAY15090.1| 861|Homo sapiens unknown protein.
Length = 861
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 214 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 354
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 478 LPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYIS 524
>AB208898-1|BAD92135.1| 966|Homo sapiens oxysterol-binding
protein-like protein 6 isoform a variant protein.
Length = 966
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 214 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 354
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 506 LPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYIS 552
>BC107756-1|AAI07757.1| 76|Homo sapiens chromosome 3 open reading
frame 57 protein.
Length = 76
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -1
Query: 423 YSYIAVSCVCIMVPNWTRITICTTQIFMIVNGVRKTYIFKCIHVLDMIKFLYSLVLYFSI 244
Y Y +SC ++ P W R T + +I V Y+F IH+ +F + Y S
Sbjct: 15 YQYQIISCCAVLEP-WERSMFNTILLTIIAMVVYTAYVFIPIHIRLAWEFFSKICGYHST 73
Query: 243 V 241
+
Sbjct: 74 I 74
>BC071875-1|AAH71875.1| 76|Homo sapiens ADMP protein.
Length = 76
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -1
Query: 423 YSYIAVSCVCIMVPNWTRITICTTQIFMIVNGVRKTYIFKCIHVLDMIKFLYSLVLYFSI 244
Y Y +SC ++ P W R T + +I V Y+F IH+ +F + Y S
Sbjct: 15 YQYQIISCCAVLEP-WERSMFNTILLTIIAMVVYTAYVFIPIHIRLAWEFFSKICGYHST 73
Query: 243 V 241
+
Sbjct: 74 I 74
>BC065208-1|AAH65208.1| 76|Homo sapiens chromosome 3 open reading
frame 57 protein.
Length = 76
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -1
Query: 423 YSYIAVSCVCIMVPNWTRITICTTQIFMIVNGVRKTYIFKCIHVLDMIKFLYSLVLYFSI 244
Y Y +SC ++ P W R T + +I V Y+F IH+ +F + Y S
Sbjct: 15 YQYQIISCCAVLEP-WERSMFNTILLTIIAMVVYTAYVFIPIHIRLAWEFFSKICGYHST 73
Query: 243 V 241
+
Sbjct: 74 I 74
>AF458592-1|AAM49720.1| 76|Homo sapiens ADMP protein.
Length = 76
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -1
Query: 423 YSYIAVSCVCIMVPNWTRITICTTQIFMIVNGVRKTYIFKCIHVLDMIKFLYSLVLYFSI 244
Y Y +SC ++ P W R T + +I V Y+F IH+ +F + Y S
Sbjct: 15 YQYQIISCCAVLEP-WERSMFNTILLTIIAMVVYTAYVFIPIHIRLAWEFFSKICGYHST 73
Query: 243 V 241
+
Sbjct: 74 I 74
>X76952-1|CAA54274.1| 966|Homo sapiens IAI3B protein.
Length = 966
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 346 YLSCADCDAGPVGYHDTN 399
Y C DC+AGP G HDTN
Sbjct: 237 YNICEDCEAGPYG-HDTN 253
>D30756-1|BAA06417.2| 969|Homo sapiens KIAA0049 protein.
Length = 969
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 346 YLSCADCDAGPVGYHDTN 399
Y C DC+AGP G HDTN
Sbjct: 240 YNICEDCEAGPYG-HDTN 256
>DQ478408-1|ABF14461.1| 583|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 583
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 346 YLSCADCDAGPVGYHDTN 399
Y C DC+AGP G HDTN
Sbjct: 237 YNICEDCEAGPYG-HDTN 253
>DQ190457-1|ABA29231.1| 558|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 558
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 346 YLSCADCDAGPVGYHDTN 399
Y C DC+AGP G HDTN
Sbjct: 237 YNICEDCEAGPYG-HDTN 253
>DQ190456-1|ABA29228.1| 558|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 558
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 346 YLSCADCDAGPVGYHDTN 399
Y C DC+AGP G HDTN
Sbjct: 237 YNICEDCEAGPYG-HDTN 253
>DQ190455-1|ABA29225.1| 583|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 583
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 346 YLSCADCDAGPVGYHDTN 399
Y C DC+AGP G HDTN
Sbjct: 237 YNICEDCEAGPYG-HDTN 253
>DQ190453-1|ABA29219.1| 583|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 583
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 346 YLSCADCDAGPVGYHDTN 399
Y C DC+AGP G HDTN
Sbjct: 237 YNICEDCEAGPYG-HDTN 253
>DQ190452-1|ABA29216.1| 478|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 478
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 346 YLSCADCDAGPVGYHDTN 399
Y C DC+AGP G HDTN
Sbjct: 237 YNICEDCEAGPYG-HDTN 253
>DQ190451-1|ABA29213.1| 502|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 502
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 346 YLSCADCDAGPVGYHDTN 399
Y C DC+AGP G HDTN
Sbjct: 237 YNICEDCEAGPYG-HDTN 253
>DQ190450-1|ABA29210.1| 553|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 553
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 346 YLSCADCDAGPVGYHDTN 399
Y C DC+AGP G HDTN
Sbjct: 237 YNICEDCEAGPYG-HDTN 253
>BC009808-1|AAH09808.1| 937|Homo sapiens NBR1 protein protein.
Length = 937
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 346 YLSCADCDAGPVGYHDTN 399
Y C DC+AGP G HDTN
Sbjct: 237 YNICEDCEAGPYG-HDTN 253
>AY450308-1|AAS15047.1| 966|Homo sapiens migration-inducing protein
19 protein.
Length = 966
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 346 YLSCADCDAGPVGYHDTN 399
Y C DC+AGP G HDTN
Sbjct: 237 YNICEDCEAGPYG-HDTN 253
>D50419-1|BAA23362.1| 711|Homo sapiens OTK18 protein.
Length = 711
Score = 29.1 bits (62), Expect = 7.9
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 415 HSCVLCLYHGTQLDPHHNLH-NSNIYDCQRCA*NLYFQMYTCSRHDKIPL*SRSVLLYRC 239
H+C +QLD HH +H Y+C C + Q + H KI R + C
Sbjct: 478 HNCGKSFISKSQLDIHHRIHTGEKPYECSDCG-KTFTQKSHLNIHQKIHTGERHHVCSEC 536
>BC052997-1|AAH52997.1| 711|Homo sapiens zinc finger protein 175
protein.
Length = 711
Score = 29.1 bits (62), Expect = 7.9
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 415 HSCVLCLYHGTQLDPHHNLH-NSNIYDCQRCA*NLYFQMYTCSRHDKIPL*SRSVLLYRC 239
H+C +QLD HH +H Y+C C + Q + H KI R + C
Sbjct: 478 HNCGKSFISKSQLDIHHRIHTGEKPYECSDCG-KTFTQKSHLNIHQKIHTGERHHVCSEC 536
>AK055946-1|BAB71051.1| 365|Homo sapiens protein ( Homo sapiens
cDNA FLJ31384 fis, clone NHNPC2000212, moderately
similar to ZINC FINGER PROTEIN 83. ).
Length = 365
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -3
Query: 415 HSCVLCLYHGTQLDPHHNLH-NSNIYDCQRCA*NLYFQMYTCSRH 284
+ CV H + L HH LH Y C+ C ++ Q RH
Sbjct: 205 NDCVKAFIHQSSLARHHRLHTGEKSYKCEECD-RVFSQKSNLERH 248
>AC018755-1|AAF87843.1| 711|Homo sapiens zinc finger protein 175
protein.
Length = 711
Score = 29.1 bits (62), Expect = 7.9
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 415 HSCVLCLYHGTQLDPHHNLH-NSNIYDCQRCA*NLYFQMYTCSRHDKIPL*SRSVLLYRC 239
H+C +QLD HH +H Y+C C + Q + H KI R + C
Sbjct: 478 HNCGKSFISKSQLDIHHRIHTGEKPYECSDCG-KTFTQKSHLNIHQKIHTGERHHVCSEC 536
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,384,551
Number of Sequences: 237096
Number of extensions: 1430202
Number of successful extensions: 7224
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 7148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7218
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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