Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt15f07
         (611 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL353807-3|CAI13211.2| 2964|Homo sapiens ash1 (absent, small, or...    29   9.8  
AL353807-2|CAI13212.1| 2969|Homo sapiens ash1 (absent, small, or...    29   9.8  
AL139410-7|CAI12716.2| 2964|Homo sapiens ash1 (absent, small, or...    29   9.8  
AL139410-6|CAI12722.1| 2969|Homo sapiens ash1 (absent, small, or...    29   9.8  
AF257305-1|AAF68983.1| 2969|Homo sapiens ASH1 protein.                 29   9.8  

>AL353807-3|CAI13211.2| 2964|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2964

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +3

Query: 273  LEALLEKIAIVLGVHYVKNAVVRAALRNVTAKTKID-VTKTRKRVDQKKKMKWRKTLQT* 449
            +  L EK+      H++K +VV A  R        D +  T+K +D   K+   K LQ  
Sbjct: 1779 ISLLSEKLTSSCSPHHIKRSVVEAMQRQARKMCNYDKILATKKNLDHVNKILKAKKLQRQ 1838

Query: 450  RKRMNP*IKNQ 482
             +  N  +K +
Sbjct: 1839 ARTGNNFVKRR 1849


>AL353807-2|CAI13212.1| 2969|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2969

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +3

Query: 273  LEALLEKIAIVLGVHYVKNAVVRAALRNVTAKTKID-VTKTRKRVDQKKKMKWRKTLQT* 449
            +  L EK+      H++K +VV A  R        D +  T+K +D   K+   K LQ  
Sbjct: 1779 ISLLSEKLTSSCSPHHIKRSVVEAMQRQARKMCNYDKILATKKNLDHVNKILKAKKLQRQ 1838

Query: 450  RKRMNP*IKNQ 482
             +  N  +K +
Sbjct: 1839 ARTGNNFVKRR 1849


>AL139410-7|CAI12716.2| 2964|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2964

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +3

Query: 273  LEALLEKIAIVLGVHYVKNAVVRAALRNVTAKTKID-VTKTRKRVDQKKKMKWRKTLQT* 449
            +  L EK+      H++K +VV A  R        D +  T+K +D   K+   K LQ  
Sbjct: 1779 ISLLSEKLTSSCSPHHIKRSVVEAMQRQARKMCNYDKILATKKNLDHVNKILKAKKLQRQ 1838

Query: 450  RKRMNP*IKNQ 482
             +  N  +K +
Sbjct: 1839 ARTGNNFVKRR 1849


>AL139410-6|CAI12722.1| 2969|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2969

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +3

Query: 273  LEALLEKIAIVLGVHYVKNAVVRAALRNVTAKTKID-VTKTRKRVDQKKKMKWRKTLQT* 449
            +  L EK+      H++K +VV A  R        D +  T+K +D   K+   K LQ  
Sbjct: 1779 ISLLSEKLTSSCSPHHIKRSVVEAMQRQARKMCNYDKILATKKNLDHVNKILKAKKLQRQ 1838

Query: 450  RKRMNP*IKNQ 482
             +  N  +K +
Sbjct: 1839 ARTGNNFVKRR 1849


>AF257305-1|AAF68983.1| 2969|Homo sapiens ASH1 protein.
          Length = 2969

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +3

Query: 273  LEALLEKIAIVLGVHYVKNAVVRAALRNVTAKTKID-VTKTRKRVDQKKKMKWRKTLQT* 449
            +  L EK+      H++K +VV A  R        D +  T+K +D   K+   K LQ  
Sbjct: 1779 ISLLSEKLTSSCSPHHIKRSVVEAMQRQARKMCNYDKILATKKNLDHVNKILKAKKLQRQ 1838

Query: 450  RKRMNP*IKNQ 482
             +  N  +K +
Sbjct: 1839 ARTGNNFVKRR 1849


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,237,538
Number of Sequences: 237096
Number of extensions: 909558
Number of successful extensions: 1326
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)