Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt15f07
         (611 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030453-1|ABP87895.1|  980|Drosophila melanogaster IP18281p pro...    28   8.6  

>BT030453-1|ABP87895.1|  980|Drosophila melanogaster IP18281p
           protein.
          Length = 980

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/73 (27%), Positives = 36/73 (49%)
 Frame = +3

Query: 90  INKIKTGGSINQKWPETEVLNGGGQDHEIEEIGIVTMNANRIVKK*SAGTGLKALKKMRI 269
           + ++++ GSIN+K  ET     GGQ   I      + N N I+   +    +K  +++ I
Sbjct: 411 LTRLRSFGSINRKHQETAAPPKGGQQKAISAASNNSCNTNPIM---AVLRTMKLKERLVI 467

Query: 270 KLEALLEKIAIVL 308
            L A L  + ++L
Sbjct: 468 SLGATLVLLTLLL 480


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,204,868
Number of Sequences: 53049
Number of extensions: 278899
Number of successful extensions: 866
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)