Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt15e21
(571 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012560-1|AAH12560.1| 201|Homo sapiens mitochondrial ribosomal... 118 1e-26
AL096814-4|CAD92529.1| 201|Homo sapiens mitochondrial ribosomal... 118 1e-26
AK001429-1|BAA91686.1| 201|Homo sapiens protein ( Homo sapiens ... 118 1e-26
AF277180-1|AAK07539.1| 108|Homo sapiens PNAS-122 protein. 40 0.006
BC009764-1|AAH09764.1| 212|Homo sapiens mitochondrial ribosomal... 34 0.31
AF151876-1|AAD34113.1| 212|Homo sapiens CGI-118 protein protein. 34 0.31
BC109063-1|AAI09064.1| 485|Homo sapiens tripartite motif-contai... 30 5.0
BC075058-1|AAH75058.1| 485|Homo sapiens tripartite motif-contai... 30 5.0
AY005802-1|AAF91075.1| 319|Homo sapiens GC109 protein. 30 5.0
AF439153-1|AAL31641.1| 485|Homo sapiens Ro/SSA1 related protein... 30 5.0
AF360739-1|AAL11501.1| 485|Homo sapiens SSA protein SS-56 protein. 30 5.0
BC036501-1|AAH36501.1| 113|Homo sapiens MRPL48 protein protein. 30 6.6
>BC012560-1|AAH12560.1| 201|Homo sapiens mitochondrial ribosomal
protein S10 protein.
Length = 201
Score = 118 bits (284), Expect = 1e-26
Identities = 59/105 (56%), Positives = 75/105 (71%)
Frame = +3
Query: 255 DKLYKRVELEMRGIDPAVLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIY 434
D LYKR+ + ++G D AVL SY +F V AA LGI + RK E R TLL+ VHIY
Sbjct: 70 DILYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISIKVHEPPRKIE--RFTLLQSVHIY 127
Query: 435 KKHKVQYEIRTYFRFIHMQRLTGSTCDTYLEYIERNLPEGCALKV 569
KKH+VQYE+RT +R + ++ LTGST D YLEYI+RNLPEG A++V
Sbjct: 128 KKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEV 172
>AL096814-4|CAD92529.1| 201|Homo sapiens mitochondrial ribosomal
protein S10 protein.
Length = 201
Score = 118 bits (284), Expect = 1e-26
Identities = 59/105 (56%), Positives = 75/105 (71%)
Frame = +3
Query: 255 DKLYKRVELEMRGIDPAVLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIY 434
D LYKR+ + ++G D AVL SY +F V AA LGI + RK E R TLL+ VHIY
Sbjct: 70 DILYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISIKVHEPPRKIE--RFTLLQSVHIY 127
Query: 435 KKHKVQYEIRTYFRFIHMQRLTGSTCDTYLEYIERNLPEGCALKV 569
KKH+VQYE+RT +R + ++ LTGST D YLEYI+RNLPEG A++V
Sbjct: 128 KKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEV 172
>AK001429-1|BAA91686.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ10567 fis, clone NT2RP2002980, weakly similar to
30S RIBOSOMAL PROTEIN S10. ).
Length = 201
Score = 118 bits (284), Expect = 1e-26
Identities = 59/105 (56%), Positives = 75/105 (71%)
Frame = +3
Query: 255 DKLYKRVELEMRGIDPAVLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIY 434
D LYKR+ + ++G D AVL SY +F V AA LGI + RK E R TLL+ VHIY
Sbjct: 70 DILYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISIKVHEPPRKIE--RFTLLQSVHIY 127
Query: 435 KKHKVQYEIRTYFRFIHMQRLTGSTCDTYLEYIERNLPEGCALKV 569
KKH+VQYE+RT +R + ++ LTGST D YLEYI+RNLPEG A++V
Sbjct: 128 KKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEV 172
>AF277180-1|AAK07539.1| 108|Homo sapiens PNAS-122 protein.
Length = 108
Score = 39.9 bits (89), Expect = 0.006
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 255 DKLYKRVELEMRGIDPAVLLSYSWFCVAAASHLGIEV 365
D LYKR+ + ++G D AVL SY +F V AA LGI +
Sbjct: 70 DILYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISI 106
>BC009764-1|AAH09764.1| 212|Homo sapiens mitochondrial ribosomal
protein L48 protein.
Length = 212
Score = 34.3 bits (75), Expect = 0.31
Identities = 25/105 (23%), Positives = 49/105 (46%)
Frame = +3
Query: 255 DKLYKRVELEMRGIDPAVLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIY 434
D Y + + + D + SY+ + + L I+V +S+A+ E +L+
Sbjct: 85 DYEYGVLNIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIE---VLQLQDQG 141
Query: 435 KKHKVQYEIRTYFRFIHMQRLTGSTCDTYLEYIERNLPEGCALKV 569
K + + T+ R + + L+ + + +LE I+ +LPEG L V
Sbjct: 142 SKMLLDSVLTTHERVVQISGLSATFAEIFLEIIQSSLPEGVRLSV 186
>AF151876-1|AAD34113.1| 212|Homo sapiens CGI-118 protein protein.
Length = 212
Score = 34.3 bits (75), Expect = 0.31
Identities = 25/105 (23%), Positives = 49/105 (46%)
Frame = +3
Query: 255 DKLYKRVELEMRGIDPAVLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIY 434
D Y + + + D + SY+ + + L I+V +S+A+ E +L+
Sbjct: 85 DYEYGVLNIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIE---VLQLQDQG 141
Query: 435 KKHKVQYEIRTYFRFIHMQRLTGSTCDTYLEYIERNLPEGCALKV 569
K + + T+ R + + L+ + + +LE I+ +LPEG L V
Sbjct: 142 SKMLLDSVLTTHERVVQISGLSATFAEIFLEIIQSSLPEGVRLSV 186
>BC109063-1|AAI09064.1| 485|Homo sapiens tripartite
motif-containing 68 protein.
Length = 485
Score = 30.3 bits (65), Expect = 5.0
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = +3
Query: 306 VLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIYKKHKVQYEIRTYFRFIH 485
V Y W A HL E ++W L E++R K +K + +E Y R +
Sbjct: 137 VAWEYKWELHEALEHLKKEQEEAWKLEVGERKRTATWKIQVETRKQSIVWEFEKYQRLLE 196
Query: 486 MQR 494
++
Sbjct: 197 KKQ 199
>BC075058-1|AAH75058.1| 485|Homo sapiens tripartite
motif-containing 68 protein.
Length = 485
Score = 30.3 bits (65), Expect = 5.0
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = +3
Query: 306 VLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIYKKHKVQYEIRTYFRFIH 485
V Y W A HL E ++W L E++R K +K + +E Y R +
Sbjct: 137 VAWEYKWELHEALEHLKKEQEEAWKLEVGERKRTATWKIQVETRKQSIVWEFEKYQRLLE 196
Query: 486 MQR 494
++
Sbjct: 197 KKQ 199
>AY005802-1|AAF91075.1| 319|Homo sapiens GC109 protein.
Length = 319
Score = 30.3 bits (65), Expect = 5.0
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = +3
Query: 306 VLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIYKKHKVQYEIRTYFRFIH 485
V Y W A HL E ++W L E++R K +K + +E Y R +
Sbjct: 29 VAWEYKWELHEALEHLKKEQEEAWKLEVGERKRTATWKVQVETRKQSIVWEFEKYQRLLE 88
Query: 486 MQR 494
++
Sbjct: 89 KKQ 91
>AF439153-1|AAL31641.1| 485|Homo sapiens Ro/SSA1 related protein
FLJ10369 protein.
Length = 485
Score = 30.3 bits (65), Expect = 5.0
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = +3
Query: 306 VLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIYKKHKVQYEIRTYFRFIH 485
V Y W A HL E ++W L E++R K +K + +E Y R +
Sbjct: 137 VAWEYKWELHEALEHLKKEQEEAWKLEVGERKRTATWKIQVETRKQSIVWEFEKYQRLLE 196
Query: 486 MQR 494
++
Sbjct: 197 KKQ 199
>AF360739-1|AAL11501.1| 485|Homo sapiens SSA protein SS-56 protein.
Length = 485
Score = 30.3 bits (65), Expect = 5.0
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = +3
Query: 306 VLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIYKKHKVQYEIRTYFRFIH 485
V Y W A HL E ++W L E++R K +K + +E Y R +
Sbjct: 137 VAWEYKWELHEALEHLKKEQEEAWKLEVGERKRTATWKIQVETRKQSIVWEFEKYQRLLE 196
Query: 486 MQR 494
++
Sbjct: 197 KKQ 199
>BC036501-1|AAH36501.1| 113|Homo sapiens MRPL48 protein protein.
Length = 113
Score = 29.9 bits (64), Expect = 6.6
Identities = 21/85 (24%), Positives = 41/85 (48%)
Frame = +3
Query: 315 SYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIYKKHKVQYEIRTYFRFIHMQR 494
SY+ + + L I+V +S+A+ E +L+ K + + T+ R + +
Sbjct: 6 SYAQYVHNLCNSLSIKVEESYAMPTKTIE---VLQLQDQGSKMLLDSVLTTHERVVQISG 62
Query: 495 LTGSTCDTYLEYIERNLPEGCALKV 569
+ + + +LE I+ +LPEG L V
Sbjct: 63 FSATFAEIFLEIIQSSLPEGVRLSV 87
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,686,458
Number of Sequences: 237096
Number of extensions: 1442856
Number of successful extensions: 2508
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2505
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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