Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt15e12
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069316-1|AAL39461.1|  303|Drosophila melanogaster LD03052p pro...    93   2e-19
AE014298-2564|AAO41692.1|  303|Drosophila melanogaster CG5445-PD...    93   2e-19
AE014298-2563|AAN09441.1|  303|Drosophila melanogaster CG5445-PC...    93   2e-19
AE014298-2562|AAF48724.1|  303|Drosophila melanogaster CG5445-PB...    93   2e-19
AE014298-2561|AAF48723.1|  303|Drosophila melanogaster CG5445-PA...    93   2e-19

>AY069316-1|AAL39461.1|  303|Drosophila melanogaster LD03052p
           protein.
          Length = 303

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = +2

Query: 191 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYT 370
           +ID  LL QFSCM TTD E+LI Q Q L+   +N  +A F+L+MSNW+LQ A+ CYLD+ 
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFC 172

Query: 371 S-PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVY 547
           S   LPSM +   +             Q + + N GTE+WP  C L      P+    + 
Sbjct: 173 SLQSLPSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRIN 221

Query: 548 LPPLPVGHSTTV 583
           +P L  G +  +
Sbjct: 222 VPALRPGETCDI 233


>AE014298-2564|AAO41692.1|  303|Drosophila melanogaster CG5445-PD,
           isoform D protein.
          Length = 303

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = +2

Query: 191 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYT 370
           +ID  LL QFSCM TTD E+LI Q Q L+   +N  +A F+L+MSNW+LQ A+ CYLD+ 
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFC 172

Query: 371 S-PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVY 547
           S   LPSM +   +             Q + + N GTE+WP  C L      P+    + 
Sbjct: 173 SLQSLPSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRIN 221

Query: 548 LPPLPVGHSTTV 583
           +P L  G +  +
Sbjct: 222 VPALRPGETCDI 233


>AE014298-2563|AAN09441.1|  303|Drosophila melanogaster CG5445-PC,
           isoform C protein.
          Length = 303

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = +2

Query: 191 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYT 370
           +ID  LL QFSCM TTD E+LI Q Q L+   +N  +A F+L+MSNW+LQ A+ CYLD+ 
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFC 172

Query: 371 S-PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVY 547
           S   LPSM +   +             Q + + N GTE+WP  C L      P+    + 
Sbjct: 173 SLQSLPSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRIN 221

Query: 548 LPPLPVGHSTTV 583
           +P L  G +  +
Sbjct: 222 VPALRPGETCDI 233


>AE014298-2562|AAF48724.1|  303|Drosophila melanogaster CG5445-PB,
           isoform B protein.
          Length = 303

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = +2

Query: 191 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYT 370
           +ID  LL QFSCM TTD E+LI Q Q L+   +N  +A F+L+MSNW+LQ A+ CYLD+ 
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFC 172

Query: 371 S-PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVY 547
           S   LPSM +   +             Q + + N GTE+WP  C L      P+    + 
Sbjct: 173 SLQSLPSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRIN 221

Query: 548 LPPLPVGHSTTV 583
           +P L  G +  +
Sbjct: 222 VPALRPGETCDI 233


>AE014298-2561|AAF48723.1|  303|Drosophila melanogaster CG5445-PA,
           isoform A protein.
          Length = 303

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = +2

Query: 191 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYT 370
           +ID  LL QFSCM TTD E+LI Q Q L+   +N  +A F+L+MSNW+LQ A+ CYLD+ 
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFC 172

Query: 371 S-PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVY 547
           S   LPSM +   +             Q + + N GTE+WP  C L      P+    + 
Sbjct: 173 SLQSLPSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRIN 221

Query: 548 LPPLPVGHSTTV 583
           +P L  G +  +
Sbjct: 222 VPALRPGETCDI 233


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,145,785
Number of Sequences: 53049
Number of extensions: 612990
Number of successful extensions: 1531
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1526
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)