Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt15e11
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical pr... 40 0.002
AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger p... 40 0.002
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 30 1.7
U23522-1|AAC46819.3| 962|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z79605-4|CAB01902.2| 557|Caenorhabditis elegans Hypothetical pr... 29 3.0
U61236-1|AAB17541.1| 557|Caenorhabditis elegans M75 protein. 29 3.0
Z48795-6|CAA88730.1| 203|Caenorhabditis elegans Hypothetical pr... 29 4.0
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 29 4.0
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 29 4.0
Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical pr... 28 5.3
AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical... 28 5.3
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 28 6.9
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL161712-14|CAC35895.1| 286|Caenorhabditis elegans Hypothetical... 28 6.9
AF022985-16|AAV28323.1| 307|Caenorhabditis elegans Hypothetical... 28 6.9
AF022970-3|AAY86207.1| 92|Caenorhabditis elegans Hypothetical ... 28 6.9
Z69383-4|CAA93411.2| 326|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z68118-6|CAA92187.1| 311|Caenorhabditis elegans Hypothetical pr... 27 9.2
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical
protein T23G4.1 protein.
Length = 354
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +3
Query: 174 MMATNPNQYLQPDYLAPLPSTLDSKKSPLALLAQTCSQIGVDSTPSK---PLLPPHDKKK 344
M++T+ +QY+ D+ P+P+ + KSPLALLA+TC IG+ SK + K
Sbjct: 1 MVSTHSSQYIT-DF-TPVPA--EPGKSPLALLAKTCETIGLPEGSSKKNGASSSSSPQGK 56
Query: 345 VNSVNNSDIISRSSPNSNTMKQDKPRSSPESK 440
+ N+ + ++ PRS+P+SK
Sbjct: 57 KDEKNHILHHQHHQQQQQSKQKSSPRSTPQSK 88
>AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger
protein TLP-1 protein.
Length = 354
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +3
Query: 174 MMATNPNQYLQPDYLAPLPSTLDSKKSPLALLAQTCSQIGVDSTPSK---PLLPPHDKKK 344
M++T+ +QY+ D+ P+P+ + KSPLALLA+TC IG+ SK + K
Sbjct: 1 MVSTHSSQYIT-DF-TPVPA--EPGKSPLALLAKTCETIGLPEGSSKKNGASSSSSPQGK 56
Query: 345 VNSVNNSDIISRSSPNSNTMKQDKPRSSPESK 440
+ N+ + ++ PRS+P+SK
Sbjct: 57 KDEKNHILHHQHHQQQQQSKQKSSPRSTPQSK 88
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +3
Query: 333 DKKKVNSVNNSDIISRSSPNSNTMKQDKPRSSPESKHLAFKPYEANVITKKPDETRP 503
+++++N N S+ S+ +P +K++ P+S K P +++ + K P ++ P
Sbjct: 645 EEEELNMTNVSEGSSKENPVKEEIKKETPKSVSPKKFEKKPPVKSSPVNKSPVKSSP 701
>U23522-1|AAC46819.3| 962|Caenorhabditis elegans Hypothetical
protein W06B4.3 protein.
Length = 962
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -1
Query: 174 FHRLQAPPFGDNFYYHF*TSRYNHVREFNLVYT 76
FH + + G NFY H ++ ++H+++ V T
Sbjct: 21 FHAIVSSKLGHNFYIHLKSNAFHHLKKLRCVVT 53
>Z79605-4|CAB01902.2| 557|Caenorhabditis elegans Hypothetical
protein ZK678.5 protein.
Length = 557
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 505 LPKLVRTVPKTRNLERAPRDVNQHRPVVKMEKTV 606
L K+ R+VP+ N E R VN HR VV TV
Sbjct: 203 LQKVDRSVPEILNSENTIRHVNGHRFVVHQAPTV 236
>U61236-1|AAB17541.1| 557|Caenorhabditis elegans M75 protein.
Length = 557
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 505 LPKLVRTVPKTRNLERAPRDVNQHRPVVKMEKTV 606
L K+ R+VP+ N E R VN HR VV TV
Sbjct: 203 LQKVDRSVPEILNSENTIRHVNGHRFVVHQAPTV 236
>Z48795-6|CAA88730.1| 203|Caenorhabditis elegans Hypothetical
protein R05H5.7 protein.
Length = 203
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 3 VAHSRFERRRVHMCLTCSVCAP 68
VAH F RR+V+ C + S CAP
Sbjct: 143 VAHCAFRRRQVNWCESDSECAP 164
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 28.7 bits (61), Expect = 4.0
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +3
Query: 168 GGMMATNPNQYLQPDYLAPLPSTLDSKKSPLAL---LAQTCSQIGVDSTPSKPLLPPHDK 338
GG+ A P P +P+ + +SK P+ + +A Q+ V TP+KP++ + K
Sbjct: 570 GGVAADEPPP---PCSYSPVAQSSESKIEPVDVKPRVAPVPPQVPV--TPTKPVITNNKK 624
Query: 339 KKVNSVNNSDIISRSSPNSNTMKQDKPRSSPES 437
K+++ V + +P +KQ+ P S S
Sbjct: 625 KRIDVVT----LDEDAPRRVQVKQEIPEVSSTS 653
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 28.7 bits (61), Expect = 4.0
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +3
Query: 168 GGMMATNPNQYLQPDYLAPLPSTLDSKKSPLAL---LAQTCSQIGVDSTPSKPLLPPHDK 338
GG+ A P P +P+ + +SK P+ + +A Q+ V TP+KP++ + K
Sbjct: 570 GGVAADEPPP---PCSYSPVAQSSESKIEPVDVKPRVAPVPPQVPV--TPTKPVITNNKK 624
Query: 339 KKVNSVNNSDIISRSSPNSNTMKQDKPRSSPES 437
K+++ V + +P +KQ+ P S S
Sbjct: 625 KRIDVVT----LDEDAPRRVQVKQEIPEVSSTS 653
>Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical
protein F15A2.3 protein.
Length = 336
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 210 DYLAPLPSTLDSKKSPLALLAQTCSQIGVDSTPSKPLLPPHDKKKVNSV 356
DY+ KSP A++AQ+ +GV + PL+ H ++K+N +
Sbjct: 172 DYVNNALIGFSDSKSPAAIIAQSLISLGVYMS---PLIAFHYRRKINKI 217
>AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical
protein Y47D7A.11 protein.
Length = 129
Score = 28.3 bits (60), Expect = 5.3
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Frame = +3
Query: 150 MVVLEDGGMMATNPNQYLQPDYLAPLPSTLDSKKSPLALLAQTCSQIGVDSTPSKPLLPP 329
+V+L G + P Y P PS KK P+A + + S P P
Sbjct: 11 LVILVQCGYPVAENSYPTTPSYPTPPPSYPTPKKYPVAPTYPSPPAYAQKPSYSAPPPPA 70
Query: 330 HDKKKVNSVNNSDIISRS-----SPNSNTMKQDKPRSSPESK 440
+S +++++ S S SPNS K+ K R++ K
Sbjct: 71 PSVYSSSSFSDNEVASDSEYTTASPNSEYRKRAKARTAHNRK 112
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +3
Query: 231 STLDSKKSPLALLAQTCSQIGVDSTPSKPLLPPHDKKKVNSVNNSDIISRSSPNSNTMKQ 410
+T SP + + T S+ DS ++P H +S + ++ RSS +SN+ K+
Sbjct: 24 TTAHPSSSPKSKTSVTSSRSDTDS-----VIPEHKPSSASSFSIGRLLFRSSGSSNSTKR 78
Query: 411 DKPRSSPESK 440
D S + +
Sbjct: 79 DSVDSGKDDE 88
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +3
Query: 231 STLDSKKSPLALLAQTCSQIGVDSTPSKPLLPPHDKKKVNSVNNSDIISRSSPNSNTMKQ 410
+T SP + + T S+ DS ++P H +S + ++ RSS +SN+ K+
Sbjct: 24 TTAHPSSSPKSKTSVTSSRSDTDS-----VIPEHKPSSASSFSIGRLLFRSSGSSNSTKR 78
Query: 411 DKPRSSPESK 440
D S + +
Sbjct: 79 DSVDSGKDDE 88
Score = 27.9 bits (59), Expect = 6.9
Identities = 28/76 (36%), Positives = 33/76 (43%)
Frame = +3
Query: 216 LAPLPSTLDSKKSPLALLAQTCSQIGVDSTPSKPLLPPHDKKKVNSVNNSDIISRSSPNS 395
L+P P+TL+ SP S IG S P L + K KV S S S P S
Sbjct: 761 LSPFPATLEEDSSPRHHRHGDHSHIGRQS-PLARELTTNGKVKVQSQR-----SGSWPFS 814
Query: 396 NTMKQDKPRSSPESKH 443
T Q P S PE +H
Sbjct: 815 LTKTQTSP-SRPEGQH 829
>AL161712-14|CAC35895.1| 286|Caenorhabditis elegans Hypothetical
protein Y66D12A.18 protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +3
Query: 258 LALLAQTCSQIGVDSTPSKPLLP--PHDKKKVN--SVNNSDIISRSSPNSNTMKQDKPRS 425
L L A C+ + P++ +LP P +K + + I R+ P + +KQD PR+
Sbjct: 99 LKLKAPKCALAWGNDRPTREMLPTVPEEKPALGRRDASRGRSIPRAQPPAQDLKQDAPRA 158
>AF022985-16|AAV28323.1| 307|Caenorhabditis elegans Hypothetical
protein T15B7.1 protein.
Length = 307
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 45 LTCSVCAPFAKCTLN*TPLRDCIVKFK 125
LTCS+ +PF+ P+++C+ KF+
Sbjct: 227 LTCSIGSPFSTIDNIHDPVKECVTKFQ 253
>AF022970-3|AAY86207.1| 92|Caenorhabditis elegans Hypothetical
protein F13A2.9 protein.
Length = 92
Score = 27.9 bits (59), Expect = 6.9
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +3
Query: 45 LTCSVCAPFAKCTLN*TPLRDCIVKFKSDSKSYLQMVVLEDGGMMATNPNQYLQPDYLAP 224
+ C V L L+DCI + S SKS+ Q+ E+G ++ Y++P
Sbjct: 1 MNCPVSPNKQSAFLKQINLQDCIKEKTSCSKSFAQLPEDENG---VSSTTMTTLKSYISP 57
Query: 225 LPSTLDSKKSPLALLAQTCSQI 290
+ S+L + K + +T QI
Sbjct: 58 MVSSLIAAKCEAEAVNKTDLQI 79
>Z69383-4|CAA93411.2| 326|Caenorhabditis elegans Hypothetical
protein F13E9.9 protein.
Length = 326
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 291 GVDSTPSKPL-LPPHDKKKVNSVNNSDIISRSSPNSNTMKQDKPRSSPESKH 443
GV S P K + P KKK + +D SSP N + + R + +H
Sbjct: 219 GVKSIPGKAKSILPGGKKKNGDITLNDYTQDSSPQENHLHVHRDRHYHDERH 270
>Z68118-6|CAA92187.1| 311|Caenorhabditis elegans Hypothetical
protein R01E6.6 protein.
Length = 311
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 282 SQIGVDSTPSKPLLPPHDKKKVNSVNNSDIISRSSPNSNTMKQDKPRSSPESKHL 446
S + + SK ++ K S + + SR ++ +D+P+SS ESK++
Sbjct: 27 SSVSGEFNKSKSMMDMSSKSSRMSTSTASNTSRQKSITSIKDKDRPKSSRESKNI 81
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = +3
Query: 303 TPSKPLLPPHDKKKVNSVNNSDIISRSSPNSNTMKQDKPRSSPESKHLAFKPYEANVITK 482
TP KP P K S S+ P M + KP+ P KH KP+ ++
Sbjct: 9 TP-KPKSEPFPKPMPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKP-KPFPKPMLFP 66
Query: 483 KP 488
KP
Sbjct: 67 KP 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,050,662
Number of Sequences: 27780
Number of extensions: 352761
Number of successful extensions: 1145
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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